RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 RBM43Q6ZSC3 357 aaKnown RBP11.92□□□□□ -0.5
CASP4-203ENST00000444739 NUTM1Q86Y26 1132 aa11.92□□□□□ -0.5
CASP4-203ENST00000444739 ZNF397Q8NF99 534 aaPredicted RBP11.92□□□□□ -0.5
CASP4-203ENST00000444739 TRIM5Q9C035 493 aa11.92□□□□□ -0.5
CASP4-203ENST00000444739 LRRFIP2Q9Y608 721 aaKnown RBP11.92□□□□□ -0.5
CASP4-203ENST00000444739 SOS1Q07889 1333 aaPredicted RBP11.92□□□□□ -0.5
CASP4-203ENST00000444739 CCDC171Q6TFL3 1326 aa11.92□□□□□ -0.5
CASP4-203ENST00000444739 VPS37CA5D8V6 355 aaPredicted RBP11.92□□□□□ -0.5
CASP4-203ENST00000444739 KRT85P78386 507 aa11.92□□□□□ -0.5
CASP4-203ENST00000444739 CEP135Q66GS9 1140 aa11.92□□□□□ -0.5
CASP4-203ENST00000444739 SH2B1Q9NRF2 756 aaPredicted RBP11.92□□□□□ -0.5
CASP4-203ENST00000444739 TTC21AQ8NDW8 1320 aa11.91□□□□□ -0.5
CASP4-203ENST00000444739 CACNA1FO60840 1977 aa11.91□□□□□ -0.5
CASP4-203ENST00000444739 CCDC66A2RUB6 948 aa11.91□□□□□ -0.5
CASP4-203ENST00000444739 CCDC144BQ3MJ40 725 aa11.91□□□□□ -0.5
CASP4-203ENST00000444739 VPS53Q5VIR6 699 aa11.91□□□□□ -0.5
CASP4-203ENST00000444739 CCDC144CPQ8IYA2 1237 aa11.91□□□□□ -0.5
CASP4-203ENST00000444739 CKAP2LQ8IYA6 745 aa11.91□□□□□ -0.5
CASP4-203ENST00000444739 ZSCAN31Q96LW9 406 aaPredicted RBP11.91□□□□□ -0.5
CASP4-203ENST00000444739 TNMDQ9H2S6 317 aa11.91□□□□□ -0.5
CASP4-203ENST00000444739 DIP2CQ9Y2E4 1556 aa11.91□□□□□ -0.5
CASP4-203ENST00000444739 PDRG1Q9NUG6 133 aa11.91□□□□□ -0.5
CASP4-203ENST00000444739 DACT1Q9NYF0 836 aa11.91□□□□□ -0.5
CASP4-203ENST00000444739 CLIP2Q9UDT6 1046 aa11.91□□□□□ -0.5
CASP4-203ENST00000444739 CHMP3Q9Y3E7 222 aa11.91□□□□□ -0.5
CASP4-203ENST00000444739 CDC25BP30305 580 aa11.9□□□□□ -0.5
CASP4-203ENST00000444739 IRX5P78411 483 aaPredicted RBP11.9□□□□□ -0.5
CASP4-203ENST00000444739 FLIIQ13045 1269 aa11.9□□□□□ -0.5
CASP4-203ENST00000444739 SSH3Q8TE77 659 aa11.9□□□□□ -0.5
CASP4-203ENST00000444739 TSPYL4Q9UJ04 414 aa11.9□□□□□ -0.5
CASP4-203ENST00000444739 ZNF215Q9UL58 517 aaPredicted RBP11.9□□□□□ -0.5
CASP4-203ENST00000444739 SPG7Q9UQ90 795 aa11.9□□□□□ -0.5
CASP4-203ENST00000444739 RBM6P78332 1123 aaKnown RBP11.89□□□□□ -0.51
CASP4-203ENST00000444739 ME3Q16798 604 aa11.89□□□□□ -0.51
CASP4-203ENST00000444739 ADCK5Q3MIX3 580 aa11.89□□□□□ -0.51
CASP4-203ENST00000444739 NYAP1Q6ZVC0 841 aa11.89□□□□□ -0.51
CASP4-203ENST00000444739 CDC37L1Q7L3B6 337 aa11.89□□□□□ -0.51
CASP4-203ENST00000444739 CNTROBQ8N137 903 aa11.89□□□□□ -0.51
CASP4-203ENST00000444739 KCNB2Q92953 911 aa11.89□□□□□ -0.51
CASP4-203ENST00000444739 TM6SF1Q9BZW5 370 aa11.89□□□□□ -0.51
CASP4-203ENST00000444739 CLSTN2Q9H4D0 955 aa11.89□□□□□ -0.51
CASP4-203ENST00000444739 ZSWIM6Q9HCJ5 1215 aa11.89□□□□□ -0.51
CASP4-203ENST00000444739 DDX19AQ9NUU7 478 aaKnown RBP11.89□□□□□ -0.51
CASP4-203ENST00000444739 PEAK1Q9H792 1746 aa11.89□□□□□ -0.51
CASP4-203ENST00000444739 ERBB3P21860 1342 aa11.89□□□□□ -0.51
CASP4-203ENST00000444739 RAB11FIP3O75154 756 aa11.89□□□□□ -0.51
CASP4-203ENST00000444739 KCNJ4P48050 445 aa11.89□□□□□ -0.51
CASP4-203ENST00000444739 SLFNL1Q499Z3 407 aa11.89□□□□□ -0.51
CASP4-203ENST00000444739 FBXO38Q6PIJ6 1188 aa11.89□□□□□ -0.51
CASP4-203ENST00000444739 CWC27Q6UX04 472 aaKnown RBP11.89□□□□□ -0.51
CASP4-203ENST00000444739 JAKMIP1Q96N16 626 aaKnown RBP11.89□□□□□ -0.51
CASP4-203ENST00000444739 STK31Q9BXU1 1019 aa11.89□□□□□ -0.51
CASP4-203ENST00000444739 PXDNLA1KZ92 1463 aa11.89□□□□□ -0.51
CASP4-203ENST00000444739 RIMS1Q86UR5 1692 aaKnown RBP11.89□□□□□ -0.51
CASP4-203ENST00000444739 ADGRL3Q9HAR2 1447 aa11.89□□□□□ -0.51
CASP4-203ENST00000444739 USP27XA6NNY8 438 aa11.88□□□□□ -0.51
CASP4-203ENST00000444739 WASLO00401 505 aaPredicted RBP11.88□□□□□ -0.51
CASP4-203ENST00000444739 ZNF165P49910 485 aa11.88□□□□□ -0.51
CASP4-203ENST00000444739 LARP1BQ659C4 914 aaKnown RBP11.88□□□□□ -0.51
CASP4-203ENST00000444739 FAM173BQ6P4H8 233 aa11.88□□□□□ -0.51
CASP4-203ENST00000444739 LRRC8AQ8IWT6 810 aa11.88□□□□□ -0.51
CASP4-203ENST00000444739 NECAB1Q8N987 351 aa11.88□□□□□ -0.51
CASP4-203ENST00000444739 ZNF592Q92610 1267 aa11.88□□□□□ -0.51
CASP4-203ENST00000444739 USP44Q9H0E7 712 aa11.88□□□□□ -0.51
CASP4-203ENST00000444739 NPHP3Q7Z494 1330 aa11.88□□□□□ -0.51
CASP4-203ENST00000444739 SPATA31D1Q6ZQQ2 1576 aa11.88□□□□□ -0.51
CASP4-203ENST00000444739 PDIA4P13667 645 aaKnown RBP11.88□□□□□ -0.51
CASP4-203ENST00000444739 FAM193AP78312 1265 aa11.88□□□□□ -0.51
CASP4-203ENST00000444739 PTH1RQ03431 593 aa11.88□□□□□ -0.51
CASP4-203ENST00000444739 POLA2Q14181 598 aa11.88□□□□□ -0.51
CASP4-203ENST00000444739 FERMT3Q86UX7 667 aa11.88□□□□□ -0.51
CASP4-203ENST00000444739 RHPN1Q8TCX5 695 aa11.88□□□□□ -0.51
CASP4-203ENST00000444739 ERO1AQ96HE7 468 aa11.88□□□□□ -0.51
CASP4-203ENST00000444739 TIGD1Q96MW7 591 aa11.88□□□□□ -0.51
CASP4-203ENST00000444739 DNAJC25Q9H1X3 360 aa11.88□□□□□ -0.51
CASP4-203ENST00000444739 CYP46A1Q9Y6A2 500 aa11.88□□□□□ -0.51
CASP4-203ENST00000444739 NEMFO60524 1076 aa11.87□□□□□ -0.51
CASP4-203ENST00000444739 CACNB1Q02641 598 aaPredicted RBP11.87□□□□□ -0.51
CASP4-203ENST00000444739 PDE4CQ08493 712 aa11.87□□□□□ -0.51
CASP4-203ENST00000444739 SARM1Q6SZW1 724 aa11.87□□□□□ -0.51
CASP4-203ENST00000444739 SCAND2PQ9GZW5 306 aaPredicted RBP11.87□□□□□ -0.51
CASP4-203ENST00000444739 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.87□□□□□ -0.51
CASP4-203ENST00000444739 V9GYY5 206 aaPredicted RBP11.87□□□□□ -0.51
CASP4-203ENST00000444739 TTC21BQ7Z4L5 1316 aa11.87□□□□□ -0.51
CASP4-203ENST00000444739 FOXO3O43524 673 aa11.86□□□□□ -0.51
CASP4-203ENST00000444739 UBTFL1P0CB47 393 aaPredicted RBP11.86□□□□□ -0.51
CASP4-203ENST00000444739 PTPN14Q15678 1187 aa11.86□□□□□ -0.51
CASP4-203ENST00000444739 ELF2Q15723 593 aa11.86□□□□□ -0.51
CASP4-203ENST00000444739 PRPF40BQ6NWY9 871 aaKnown RBP11.86□□□□□ -0.51
CASP4-203ENST00000444739 BCL11BQ9C0K0 894 aaPredicted RBP11.86□□□□□ -0.51
CASP4-203ENST00000444739 TPCN1Q9ULQ1 816 aa11.86□□□□□ -0.51
CASP4-203ENST00000444739 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
CASP4-203ENST00000444739 NCKAP5LQ9HCH0 1330 aa11.86□□□□□ -0.51
CASP4-203ENST00000444739 LRRC37A3O60309 1634 aa11.86□□□□□ -0.51
CASP4-203ENST00000444739 MAP3K5Q99683 1374 aa11.86□□□□□ -0.51
CASP4-203ENST00000444739 NR1I2O75469 434 aa11.86□□□□□ -0.51
CASP4-203ENST00000444739 SURF6O75683 361 aaKnown RBP11.86□□□□□ -0.51
CASP4-203ENST00000444739 ARID5BQ14865 1188 aa11.86□□□□□ -0.51
CASP4-203ENST00000444739 IQCB1Q15051 598 aa11.86□□□□□ -0.51
CASP4-203ENST00000444739 PPP1R42Q7Z4L9 355 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms