RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 NGEFQ8N5V2 710 aa28.48■■■□□ 2.15
TRAF4-205ENST00000444415 DLEC1Q9Y238 1755 aa28.48■■■□□ 2.15
TRAF4-205ENST00000444415 CLEC4GQ6UXB4 293 aa28.47■■■□□ 2.15
TRAF4-205ENST00000444415 GNAI1P63096 354 aa28.46■■■□□ 2.15
TRAF4-205ENST00000444415 NCBP3Q53F19 620 aaKnown RBP28.46■■■□□ 2.15
TRAF4-205ENST00000444415 NECTIN2Q92692 538 aa28.46■■■□□ 2.15
TRAF4-205ENST00000444415 COL11A2P13942 1736 aaPredicted RBP28.46■■■□□ 2.15
TRAF4-205ENST00000444415 RGL2O15211 777 aa28.45■■■□□ 2.14
TRAF4-205ENST00000444415 CALD1Q05682 793 aaKnown RBP28.44■■■□□ 2.14
TRAF4-205ENST00000444415 PRR5LQ6MZQ0 368 aa28.44■■■□□ 2.14
TRAF4-205ENST00000444415 MAP3K15Q6ZN16 1313 aa28.44■■■□□ 2.14
TRAF4-205ENST00000444415 ARFGEF1Q9Y6D6 1849 aa28.43■■■□□ 2.14
TRAF4-205ENST00000444415 HOXB7P09629 217 aa28.43■■■□□ 2.14
TRAF4-205ENST00000444415 CHRNA5P30532 468 aa28.43■■■□□ 2.14
TRAF4-205ENST00000444415 DUSP27Q5VZP5 1158 aa28.43■■■□□ 2.14
TRAF4-205ENST00000444415 CCDC24Q8N4L8 307 aa28.42■■■□□ 2.14
TRAF4-205ENST00000444415 SETDB2Q96T68 719 aa28.42■■■□□ 2.14
TRAF4-205ENST00000444415 TSR2Q969E8 191 aaKnown RBP28.41■■■□□ 2.14
TRAF4-205ENST00000444415 ERVV-1B6SEH8 477 aa28.4■■■□□ 2.14
TRAF4-205ENST00000444415 C8orf58Q8NAV2 365 aa28.4■■■□□ 2.14
TRAF4-205ENST00000444415 ZBTB3Q9H5J0 574 aa28.4■■■□□ 2.14
TRAF4-205ENST00000444415 CHPF2Q9P2E5 772 aa28.4■■■□□ 2.14
TRAF4-205ENST00000444415 ZNF652Q9Y2D9 606 aa28.4■■■□□ 2.14
TRAF4-205ENST00000444415 SALL2Q9Y467 1007 aaPredicted RBP28.4■■■□□ 2.14
TRAF4-205ENST00000444415 ATP10DQ9P241 1426 aa28.4■■■□□ 2.14
TRAF4-205ENST00000444415 HDGFL1Q5TGJ6 251 aa28.4■■■□□ 2.14
TRAF4-205ENST00000444415 DDX21Q9NR30 783 aaKnown RBP eCLIP28.4■■■□□ 2.14
TRAF4-205ENST00000444415 NIP7Q9Y221 180 aaKnown RBP eCLIP28.39■■■□□ 2.13
TRAF4-205ENST00000444415 ANKRD36CQ5JPF3 1778 aa28.38■■■□□ 2.13
TRAF4-205ENST00000444415 YY1P25490 414 aa28.38■■■□□ 2.13
TRAF4-205ENST00000444415 IL16Q14005 1332 aa28.37■■■□□ 2.13
TRAF4-205ENST00000444415 UBN2Q6ZU65 1347 aa28.37■■■□□ 2.13
TRAF4-205ENST00000444415 ELL2O00472 640 aaPredicted RBP28.37■■■□□ 2.13
TRAF4-205ENST00000444415 GRIN3BO60391 1043 aa28.37■■■□□ 2.13
TRAF4-205ENST00000444415 KIF6Q6ZMV9 814 aa28.37■■■□□ 2.13
TRAF4-205ENST00000444415 TSPYL6Q8N831 410 aa28.37■■■□□ 2.13
TRAF4-205ENST00000444415 CNBD1Q8NA66 436 aa28.36■■■□□ 2.13
TRAF4-205ENST00000444415 XAGE3Q8WTP9 111 aa28.36■■■□□ 2.13
TRAF4-205ENST00000444415 COPS6Q7L5N1 327 aa28.35■■■□□ 2.13
TRAF4-205ENST00000444415 SPINK5Q9NQ38 1064 aaPredicted RBP28.35■■■□□ 2.13
TRAF4-205ENST00000444415 BCS1LQ9Y276 419 aa28.35■■■□□ 2.13
TRAF4-205ENST00000444415 TNRC6CQ9HCJ0 1690 aaKnown RBP28.35■■■□□ 2.13
TRAF4-205ENST00000444415 GIGYF2Q6Y7W6 1299 aaKnown RBP28.34■■■□□ 2.13
TRAF4-205ENST00000444415 BRIP1Q9BX63 1249 aa28.34■■■□□ 2.13
TRAF4-205ENST00000444415 PIM2Q9P1W9 311 aa28.34■■■□□ 2.13
TRAF4-205ENST00000444415 CCER2I3L3R5 266 aa28.33■■■□□ 2.13
TRAF4-205ENST00000444415 NBPF5PQ86XG9 351 aaPredicted RBP28.33■■■□□ 2.13
TRAF4-205ENST00000444415 ZNF34Q8IZ26 560 aa28.33■■■□□ 2.13
TRAF4-205ENST00000444415 ZNF521Q96K83 1311 aa28.32■■■□□ 2.12
TRAF4-205ENST00000444415 AIMP1Q12904 312 aaKnown RBP28.32■■■□□ 2.12
TRAF4-205ENST00000444415 WDR63Q8IWG1 891 aa28.32■■■□□ 2.12
TRAF4-205ENST00000444415 DBF4Q9UBU7 674 aaPredicted RBP28.32■■■□□ 2.12
TRAF4-205ENST00000444415 FANCIQ9NVI1 1328 aa28.31■■■□□ 2.12
TRAF4-205ENST00000444415 ABCC12Q96J65 1359 aa28.31■■■□□ 2.12
TRAF4-205ENST00000444415 GPTP24298 496 aa28.31■■■□□ 2.12
TRAF4-205ENST00000444415 C2CD5Q86YS7 1000 aa28.31■■■□□ 2.12
TRAF4-205ENST00000444415 CACNA1SQ13698 1873 aa28.31■■■□□ 2.12
TRAF4-205ENST00000444415 ARFGEF2Q9Y6D5 1785 aa28.31■■■□□ 2.12
TRAF4-205ENST00000444415 FAM177BA6PVY3 158 aa28.3■■■□□ 2.12
TRAF4-205ENST00000444415 DALRD3Q5D0E6 543 aaKnown RBP28.28■■■□□ 2.12
TRAF4-205ENST00000444415 IBTKQ9P2D0 1353 aaPredicted RBP28.28■■■□□ 2.12
TRAF4-205ENST00000444415 ST5P78524 1137 aa28.27■■■□□ 2.12
TRAF4-205ENST00000444415 SUSD4Q5VX71 490 aa28.27■■■□□ 2.12
TRAF4-205ENST00000444415 SLX4Q8IY92 1834 aa28.27■■■□□ 2.12
TRAF4-205ENST00000444415 PDE6BP35913 854 aa28.27■■■□□ 2.12
TRAF4-205ENST00000444415 TPTE2Q6XPS3 522 aa28.27■■■□□ 2.12
TRAF4-205ENST00000444415 NUTM1Q86Y26 1132 aa28.27■■■□□ 2.12
TRAF4-205ENST00000444415 PHAXQ9H814 394 aaKnown RBP28.27■■■□□ 2.12
TRAF4-205ENST00000444415 KLRG2A4D1S0 409 aaPredicted RBP28.26■■■□□ 2.11
TRAF4-205ENST00000444415 H0YIN7 160 aa28.26■■■□□ 2.11
TRAF4-205ENST00000444415 NTSR2O95665 410 aa28.26■■■□□ 2.11
TRAF4-205ENST00000444415 DIEXFQ68CQ4 756 aaKnown RBP28.26■■■□□ 2.11
TRAF4-205ENST00000444415 HYPKQ9NX55 129 aa28.26■■■□□ 2.11
TRAF4-205ENST00000444415 SRGNP10124 158 aa28.24■■■□□ 2.11
TRAF4-205ENST00000444415 ADCY9O60503 1353 aa28.24■■■□□ 2.11
TRAF4-205ENST00000444415 SBF1O95248 1867 aa28.24■■■□□ 2.11
TRAF4-205ENST00000444415 NPHP1O15259 732 aa28.23■■■□□ 2.11
TRAF4-205ENST00000444415 TWISTNBQ3B726 338 aaPredicted RBP28.23■■■□□ 2.11
TRAF4-205ENST00000444415 ERFEQ4G0M1 354 aa28.23■■■□□ 2.11
TRAF4-205ENST00000444415 MIER1Q8N108 512 aa28.23■■■□□ 2.11
TRAF4-205ENST00000444415 RIC1Q4ADV7 1423 aa28.23■■■□□ 2.11
TRAF4-205ENST00000444415 PLBD2Q8NHP8 589 aa28.22■■■□□ 2.11
TRAF4-205ENST00000444415 TCIRG1Q13488 830 aa28.21■■■□□ 2.11
TRAF4-205ENST00000444415 TTLL6Q8N841 843 aa28.21■■■□□ 2.11
TRAF4-205ENST00000444415 PDZRN3Q9UPQ7 1066 aa28.21■■■□□ 2.11
TRAF4-205ENST00000444415 LAMB2P55268 1798 aa28.21■■■□□ 2.11
TRAF4-205ENST00000444415 ANKRD13DQ6ZTN6 518 aa28.21■■■□□ 2.11
TRAF4-205ENST00000444415 NLRP10Q86W26 655 aa28.21■■■□□ 2.11
TRAF4-205ENST00000444415 ZNF784Q8NCA9 323 aaPredicted RBP28.21■■■□□ 2.11
TRAF4-205ENST00000444415 NYXQ9GZU5 481 aa28.21■■■□□ 2.11
TRAF4-205ENST00000444415 TCERG1O14776 1098 aaKnown RBP28.2■■■□□ 2.1
TRAF4-205ENST00000444415 PARP10Q53GL7 1025 aa28.2■■■□□ 2.1
TRAF4-205ENST00000444415 CCDC30Q5VVM6 783 aa28.2■■■□□ 2.1
TRAF4-205ENST00000444415 ZNF622Q969S3 477 aaKnown RBP eCLIP28.2■■■□□ 2.1
TRAF4-205ENST00000444415 EXOSC9Q06265 439 aaKnown RBP28.19■■■□□ 2.1
TRAF4-205ENST00000444415 ARHGAP27Q6ZUM4 889 aa28.19■■■□□ 2.1
TRAF4-205ENST00000444415 FER1L6Q2WGJ9 1857 aa28.18■■■□□ 2.1
TRAF4-205ENST00000444415 CACNA1FO60840 1977 aa28.18■■■□□ 2.1
TRAF4-205ENST00000444415 STYK1Q6J9G0 422 aa28.18■■■□□ 2.1
TRAF4-205ENST00000444415 C3orf67Q6ZVT6 689 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms