RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 ANP32CO43423 234 aa18.4■□□□□ 0.54
TREX1-202ENST00000444177 EIF4A1P60842 406 aaKnown RBP18.4■□□□□ 0.54
TREX1-202ENST00000444177 RASSF7Q02833 373 aa18.4■□□□□ 0.54
TREX1-202ENST00000444177 NEUROD2Q15784 382 aa18.4■□□□□ 0.54
TREX1-202ENST00000444177 ZNF652Q9Y2D9 606 aa18.4■□□□□ 0.54
TREX1-202ENST00000444177 SCN7AQ01118 1682 aa18.39■□□□□ 0.53
TREX1-202ENST00000444177 HSPA6P17066 643 aa18.39■□□□□ 0.53
TREX1-202ENST00000444177 ST5P78524 1137 aa18.39■□□□□ 0.53
TREX1-202ENST00000444177 RGL2O15211 777 aa18.38■□□□□ 0.53
TREX1-202ENST00000444177 TOMM70O94826 608 aa18.38■□□□□ 0.53
TREX1-202ENST00000444177 LMNB1P20700 586 aa18.38■□□□□ 0.53
TREX1-202ENST00000444177 NBPF5PQ86XG9 351 aaPredicted RBP18.38■□□□□ 0.53
TREX1-202ENST00000444177 PRELPP51888 382 aa18.37■□□□□ 0.53
TREX1-202ENST00000444177 KDM2BQ8NHM5 1336 aa18.37■□□□□ 0.53
TREX1-202ENST00000444177 SBF1O95248 1867 aa18.37■□□□□ 0.53
TREX1-202ENST00000444177 NFKBIEO00221 500 aa18.36■□□□□ 0.53
TREX1-202ENST00000444177 C21orf2O43822 256 aa18.36■□□□□ 0.53
TREX1-202ENST00000444177 SRGNP10124 158 aa18.36■□□□□ 0.53
TREX1-202ENST00000444177 HLFQ16534 295 aa18.36■□□□□ 0.53
TREX1-202ENST00000444177 CCDC184Q52MB2 194 aa18.36■□□□□ 0.53
TREX1-202ENST00000444177 NGEFQ8N5V2 710 aa18.36■□□□□ 0.53
TREX1-202ENST00000444177 ANKRD31Q8N7Z5 1873 aa18.36■□□□□ 0.53
TREX1-202ENST00000444177 ZNF219Q9P2Y4 722 aaPredicted RBP18.36■□□□□ 0.53
TREX1-202ENST00000444177 TSPYL4Q9UJ04 414 aa18.36■□□□□ 0.53
TREX1-202ENST00000444177 NIP7Q9Y221 180 aaKnown RBP eCLIP18.36■□□□□ 0.53
TREX1-202ENST00000444177 DLEC1Q9Y238 1755 aa18.35■□□□□ 0.53
TREX1-202ENST00000444177 STYK1Q6J9G0 422 aa18.35■□□□□ 0.53
TREX1-202ENST00000444177 TPTE2Q6XPS3 522 aa18.35■□□□□ 0.53
TREX1-202ENST00000444177 CNKSR1Q969H4 720 aa18.35■□□□□ 0.53
TREX1-202ENST00000444177 RRAGCQ9HB90 399 aa18.35■□□□□ 0.53
TREX1-202ENST00000444177 MASTLQ96GX5 879 aa18.34■□□□□ 0.53
TREX1-202ENST00000444177 BCORQ6W2J9 1755 aa18.33■□□□□ 0.53
TREX1-202ENST00000444177 ZC3H4Q9UPT8 1303 aaKnown RBP18.33■□□□□ 0.53
TREX1-202ENST00000444177 FAM177BA6PVY3 158 aa18.33■□□□□ 0.52
TREX1-202ENST00000444177 MRS2Q9HD23 443 aa18.33■□□□□ 0.52
TREX1-202ENST00000444177 KLRG2A4D1S0 409 aaPredicted RBP18.32■□□□□ 0.52
TREX1-202ENST00000444177 ERVV-1B6SEH8 477 aa18.32■□□□□ 0.52
TREX1-202ENST00000444177 MYL6BP14649 208 aa18.32■□□□□ 0.52
TREX1-202ENST00000444177 PRPF40BQ6NWY9 871 aaKnown RBP18.32■□□□□ 0.52
TREX1-202ENST00000444177 TTLL7Q6ZT98 887 aa18.32■□□□□ 0.52
TREX1-202ENST00000444177 C16orf71Q8IYS4 520 aaPredicted RBP18.32■□□□□ 0.52
TREX1-202ENST00000444177 RBM46Q8TBY0 533 aaKnown RBP18.32■□□□□ 0.52
TREX1-202ENST00000444177 TRIM35Q9UPQ4 493 aa18.32■□□□□ 0.52
TREX1-202ENST00000444177 APAF1O14727 1248 aa18.31■□□□□ 0.52
TREX1-202ENST00000444177 BABAM1Q9NWV8 329 aa18.31■□□□□ 0.52
TREX1-202ENST00000444177 MAP3K15Q6ZN16 1313 aa18.3■□□□□ 0.52
TREX1-202ENST00000444177 GLTPD2A6NH11 291 aa18.3■□□□□ 0.52
TREX1-202ENST00000444177 NPR1P16066 1061 aa18.3■□□□□ 0.52
TREX1-202ENST00000444177 GTF2E1P29083 439 aaPredicted RBP18.3■□□□□ 0.52
TREX1-202ENST00000444177 KIF6Q6ZMV9 814 aa18.3■□□□□ 0.52
TREX1-202ENST00000444177 LAS1LQ9Y4W2 734 aaKnown RBP18.3■□□□□ 0.52
TREX1-202ENST00000444177 C7orf43Q8WVR3 580 aa18.29■□□□□ 0.52
TREX1-202ENST00000444177 COL11A2P13942 1736 aaPredicted RBP18.29■□□□□ 0.52
TREX1-202ENST00000444177 SLX4Q8IY92 1834 aa18.28■□□□□ 0.52
TREX1-202ENST00000444177 ERBB4Q15303 1308 aa18.28■□□□□ 0.52
TREX1-202ENST00000444177 EIF2S2P20042 333 aaKnown RBP18.28■□□□□ 0.52
TREX1-202ENST00000444177 APLP1P51693 650 aa18.28■□□□□ 0.52
TREX1-202ENST00000444177 SOGA3Q5TF21 947 aa18.28■□□□□ 0.52
TREX1-202ENST00000444177 TAOK3Q9H2K8 898 aa18.28■□□□□ 0.52
TREX1-202ENST00000444177 ZBTB3Q9H5J0 574 aa18.28■□□□□ 0.52
TREX1-202ENST00000444177 LTBP3Q9NS15 1303 aa18.27■□□□□ 0.52
TREX1-202ENST00000444177 PDIA6Q15084 440 aa18.27■□□□□ 0.52
TREX1-202ENST00000444177 ERFEQ4G0M1 354 aa18.27■□□□□ 0.52
TREX1-202ENST00000444177 NYXQ9GZU5 481 aa18.27■□□□□ 0.52
TREX1-202ENST00000444177 CCDC88AQ3V6T2 1871 aa18.26■□□□□ 0.51
TREX1-202ENST00000444177 VEGFAP15692 232 aaPredicted RBP18.26■□□□□ 0.51
TREX1-202ENST00000444177 GPTP24298 496 aa18.26■□□□□ 0.51
TREX1-202ENST00000444177 FSTL1Q12841 308 aa18.26■□□□□ 0.51
TREX1-202ENST00000444177 DPY19L2Q6NUT2 758 aa18.26■□□□□ 0.51
TREX1-202ENST00000444177 LRP10Q7Z4F1 713 aa18.26■□□□□ 0.51
TREX1-202ENST00000444177 NUTM1Q86Y26 1132 aa18.26■□□□□ 0.51
TREX1-202ENST00000444177 CHL1O00533 1208 aa18.25■□□□□ 0.51
TREX1-202ENST00000444177 ALDH1B1P30837 517 aa18.25■□□□□ 0.51
TREX1-202ENST00000444177 GIGYF2Q6Y7W6 1299 aaKnown RBP18.25■□□□□ 0.51
TREX1-202ENST00000444177 ZNF34Q8IZ26 560 aa18.25■□□□□ 0.51
TREX1-202ENST00000444177 FER1L6Q2WGJ9 1857 aa18.24■□□□□ 0.51
TREX1-202ENST00000444177 PROSER3Q2NL68 480 aa18.24■□□□□ 0.51
TREX1-202ENST00000444177 CCDC93Q567U6 631 aa18.24■□□□□ 0.51
TREX1-202ENST00000444177 SUSD4Q5VX71 490 aa18.24■□□□□ 0.51
TREX1-202ENST00000444177 ANXA1P04083 346 aa18.23■□□□□ 0.51
TREX1-202ENST00000444177 CRY2Q49AN0 593 aa18.23■□□□□ 0.51
TREX1-202ENST00000444177 OLFM4Q6UX06 510 aa18.23■□□□□ 0.51
TREX1-202ENST00000444177 NUP98P52948 1817 aa18.23■□□□□ 0.51
TREX1-202ENST00000444177 UBN2Q6ZU65 1347 aa18.23■□□□□ 0.51
TREX1-202ENST00000444177 ABCC12Q96J65 1359 aa18.22■□□□□ 0.51
TREX1-202ENST00000444177 POTECB2RU33 542 aa18.22■□□□□ 0.51
TREX1-202ENST00000444177 CALD1Q05682 793 aaKnown RBP18.22■□□□□ 0.51
TREX1-202ENST00000444177 KRT24Q2M2I5 525 aa18.22■□□□□ 0.51
TREX1-202ENST00000444177 DNAJC5GQ8N7S2 189 aa18.22■□□□□ 0.51
TREX1-202ENST00000444177 SMC1BQ8NDV3 1235 aa18.22■□□□□ 0.51
TREX1-202ENST00000444177 NECTIN2Q92692 538 aa18.22■□□□□ 0.51
TREX1-202ENST00000444177 RTKN2Q8IZC4 609 aa18.21■□□□□ 0.51
TREX1-202ENST00000444177 CFAP44Q96MT7 982 aa18.21■□□□□ 0.51
TREX1-202ENST00000444177 TNRC6CQ9HCJ0 1690 aaKnown RBP18.21■□□□□ 0.51
TREX1-202ENST00000444177 HOXA10P31260 410 aaPredicted RBP18.2■□□□□ 0.5
TREX1-202ENST00000444177 FKBP4Q02790 459 aaKnown RBP eCLIP18.2■□□□□ 0.5
TREX1-202ENST00000444177 PARP10Q53GL7 1025 aa18.2■□□□□ 0.5
TREX1-202ENST00000444177 COPS6Q7L5N1 327 aa18.2■□□□□ 0.5
TREX1-202ENST00000444177 MBIPQ9NS73 344 aa18.2■□□□□ 0.5
TREX1-202ENST00000444177 IBTKQ9P2D0 1353 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms