RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 GLTPD2A6NH11 291 aa21.56■■□□□ 1.04
CTDSP1-204ENST00000443891 NBPF26B4DH59 902 aa21.56■■□□□ 1.04
CTDSP1-204ENST00000443891 NFKBIEO00221 500 aa21.56■■□□□ 1.04
CTDSP1-204ENST00000443891 SRGNP10124 158 aa21.56■■□□□ 1.04
CTDSP1-204ENST00000443891 NBPF10Q6P3W6 841 aaKnown RBP21.56■■□□□ 1.04
CTDSP1-204ENST00000443891 NBPF15Q8N660 670 aa21.56■■□□□ 1.04
CTDSP1-204ENST00000443891 RRAGCQ9HB90 399 aa21.55■■□□□ 1.04
CTDSP1-204ENST00000443891 ANKRD31Q8N7Z5 1873 aa21.54■■□□□ 1.04
CTDSP1-204ENST00000443891 TNRC6CQ9HCJ0 1690 aaKnown RBP21.54■■□□□ 1.04
CTDSP1-204ENST00000443891 KLRG2A4D1S0 409 aaPredicted RBP21.54■■□□□ 1.04
CTDSP1-204ENST00000443891 ERVV-1B6SEH8 477 aa21.54■■□□□ 1.04
CTDSP1-204ENST00000443891 PIP4K2AP48426 406 aaPredicted RBP21.54■■□□□ 1.04
CTDSP1-204ENST00000443891 DPY19L2Q6NUT2 758 aa21.54■■□□□ 1.04
CTDSP1-204ENST00000443891 BABAM1Q9NWV8 329 aa21.54■■□□□ 1.04
CTDSP1-204ENST00000443891 C21orf2O43822 256 aa21.53■■□□□ 1.04
CTDSP1-204ENST00000443891 VEGFAP15692 232 aaPredicted RBP21.53■■□□□ 1.04
CTDSP1-204ENST00000443891 EIF4A1P60842 406 aaKnown RBP21.53■■□□□ 1.04
CTDSP1-204ENST00000443891 NIP7Q9Y221 180 aaKnown RBP eCLIP21.53■■□□□ 1.04
CTDSP1-204ENST00000443891 CEP350Q5VT06 3117 aa21.53■■□□□ 1.04
CTDSP1-204ENST00000443891 ERBB4Q15303 1308 aa21.53■■□□□ 1.04
CTDSP1-204ENST00000443891 NPR1P16066 1061 aa21.52■■□□□ 1.04
CTDSP1-204ENST00000443891 PRELPP51888 382 aa21.52■■□□□ 1.04
CTDSP1-204ENST00000443891 MIS18AQ9NYP9 233 aa21.52■■□□□ 1.04
CTDSP1-204ENST00000443891 LMOD3Q0VAK6 560 aa21.51■■□□□ 1.03
CTDSP1-204ENST00000443891 PRPF40BQ6NWY9 871 aaKnown RBP21.51■■□□□ 1.03
CTDSP1-204ENST00000443891 CCDC24Q8N4L8 307 aa21.51■■□□□ 1.03
CTDSP1-204ENST00000443891 SMC1BQ8NDV3 1235 aa21.51■■□□□ 1.03
CTDSP1-204ENST00000443891 TAOK3Q9H2K8 898 aa21.51■■□□□ 1.03
CTDSP1-204ENST00000443891 NYXQ9GZU5 481 aa21.5■■□□□ 1.03
CTDSP1-204ENST00000443891 LAMB4A4D0S4 1761 aa21.49■■□□□ 1.03
CTDSP1-204ENST00000443891 KDM3BQ7LBC6 1761 aa21.49■■□□□ 1.03
CTDSP1-204ENST00000443891 ERFEQ4G0M1 354 aa21.49■■□□□ 1.03
CTDSP1-204ENST00000443891 ALDH1B1P30837 517 aa21.48■■□□□ 1.03
CTDSP1-204ENST00000443891 KIF6Q6ZMV9 814 aa21.48■■□□□ 1.03
CTDSP1-204ENST00000443891 COL11A2P13942 1736 aaPredicted RBP21.48■■□□□ 1.03
CTDSP1-204ENST00000443891 MAP3K15Q6ZN16 1313 aa21.48■■□□□ 1.03
CTDSP1-204ENST00000443891 DLG5Q8TDM6 1919 aa21.47■■□□□ 1.03
CTDSP1-204ENST00000443891 GTF2E1P29083 439 aaPredicted RBP21.47■■□□□ 1.03
CTDSP1-204ENST00000443891 CCDC93Q567U6 631 aa21.47■■□□□ 1.03
CTDSP1-204ENST00000443891 DNAJC5GQ8N7S2 189 aa21.47■■□□□ 1.03
CTDSP1-204ENST00000443891 C7orf43Q8WVR3 580 aa21.47■■□□□ 1.03
CTDSP1-204ENST00000443891 IBTKQ9P2D0 1353 aaPredicted RBP21.47■■□□□ 1.03
CTDSP1-204ENST00000443891 FER1L6Q2WGJ9 1857 aa21.46■■□□□ 1.03
CTDSP1-204ENST00000443891 RIPK4P57078 832 aa21.46■■□□□ 1.03
CTDSP1-204ENST00000443891 HLFQ16534 295 aa21.46■■□□□ 1.03
CTDSP1-204ENST00000443891 TSPYL4Q9UJ04 414 aa21.46■■□□□ 1.03
CTDSP1-204ENST00000443891 MYBBP1AQ9BQG0 1328 aaKnown RBP21.46■■□□□ 1.03
CTDSP1-204ENST00000443891 RTKN2Q8IZC4 609 aa21.45■■□□□ 1.02
CTDSP1-204ENST00000443891 THUMPD2Q9BTF0 503 aaKnown RBP21.45■■□□□ 1.02
CTDSP1-204ENST00000443891 ZNF219Q9P2Y4 722 aaPredicted RBP21.45■■□□□ 1.02
CTDSP1-204ENST00000443891 RRP7AQ9Y3A4 280 aaKnown RBP21.45■■□□□ 1.02
CTDSP1-204ENST00000443891 ARFGEF2Q9Y6D5 1785 aa21.45■■□□□ 1.02
CTDSP1-204ENST00000443891 RIC1Q4ADV7 1423 aa21.44■■□□□ 1.02
CTDSP1-204ENST00000443891 TIAM2Q8IVF5 1701 aa21.43■■□□□ 1.02
CTDSP1-204ENST00000443891 TMPOP42166 694 aaKnown RBP21.43■■□□□ 1.02
CTDSP1-204ENST00000443891 CRY2Q49AN0 593 aa21.43■■□□□ 1.02
CTDSP1-204ENST00000443891 WDR90Q96KV7 1748 aa21.43■■□□□ 1.02
CTDSP1-204ENST00000443891 FKBP4Q02790 459 aaKnown RBP eCLIP21.42■■□□□ 1.022e-6■■■■■ 27
CTDSP1-204ENST00000443891 GRIPAP1Q4V328 841 aa21.42■■□□□ 1.02
CTDSP1-204ENST00000443891 CC2D2BQ6DHV5 1058 aa21.42■■□□□ 1.02
CTDSP1-204ENST00000443891 GIGYF2Q6Y7W6 1299 aaKnown RBP21.42■■□□□ 1.02
CTDSP1-204ENST00000443891 SLX4Q8IY92 1834 aa21.42■■□□□ 1.02
CTDSP1-204ENST00000443891 DICER1Q9UPY3 1922 aaKnown RBP21.41■■□□□ 1.02
CTDSP1-204ENST00000443891 DDX10Q13206 875 aaKnown RBP21.41■■□□□ 1.02
CTDSP1-204ENST00000443891 PARP10Q53GL7 1025 aa21.41■■□□□ 1.02
CTDSP1-204ENST00000443891 TTLL7Q6ZT98 887 aa21.41■■□□□ 1.02
CTDSP1-204ENST00000443891 NGEFQ8N5V2 710 aa21.41■■□□□ 1.02
CTDSP1-204ENST00000443891 POTECB2RU33 542 aa21.4■■□□□ 1.02
CTDSP1-204ENST00000443891 MYL6BP14649 208 aa21.4■■□□□ 1.02
CTDSP1-204ENST00000443891 ZNF34Q8IZ26 560 aa21.4■■□□□ 1.02
CTDSP1-204ENST00000443891 KLRG1Q96E93 195 aa21.4■■□□□ 1.02
CTDSP1-204ENST00000443891 CCDC88AQ3V6T2 1871 aa21.39■■□□□ 1.02
CTDSP1-204ENST00000443891 FAM177BA6PVY3 158 aa21.39■■□□□ 1.01
CTDSP1-204ENST00000443891 PPP1R42Q7Z4L9 355 aa21.39■■□□□ 1.01
CTDSP1-204ENST00000443891 RUNDC1Q96C34 613 aa21.39■■□□□ 1.01
CTDSP1-204ENST00000443891 RNF123Q5XPI4 1314 aa21.38■■□□□ 1.01
CTDSP1-204ENST00000443891 IQCA1LA6NCM1 817 aa21.38■■□□□ 1.01
CTDSP1-204ENST00000443891 HOXA10P31260 410 aaPredicted RBP21.38■■□□□ 1.01
CTDSP1-204ENST00000443891 WDR43Q15061 677 aaKnown RBP eCLIP21.37■■□□□ 1.01
CTDSP1-204ENST00000443891 IFFO2Q5TF58 517 aa21.37■■□□□ 1.01
CTDSP1-204ENST00000443891 LRP10Q7Z4F1 713 aa21.37■■□□□ 1.01
CTDSP1-204ENST00000443891 JMYQ8N9B5 988 aa21.37■■□□□ 1.01
CTDSP1-204ENST00000443891 L3MBTL3Q96JM7 780 aaPredicted RBP21.37■■□□□ 1.01
CTDSP1-204ENST00000443891 PSMD1Q99460 953 aa21.37■■□□□ 1.01
CTDSP1-204ENST00000443891 ZBTB3Q9H5J0 574 aa21.37■■□□□ 1.01
CTDSP1-204ENST00000443891 PDIA6Q15084 440 aa21.36■■□□□ 1.01
CTDSP1-204ENST00000443891 HSP90AB3PQ58FF7 597 aa21.36■■□□□ 1.01
CTDSP1-204ENST00000443891 RPGRQ92834 1020 aaKnown RBP21.36■■□□□ 1.01
CTDSP1-204ENST00000443891 CRAMP1Q96RY5 1269 aa21.36■■□□□ 1.01
CTDSP1-204ENST00000443891 UBN2Q6ZU65 1347 aa21.35■■□□□ 1.01
CTDSP1-204ENST00000443891 NUP98P52948 1817 aa21.35■■□□□ 1.01
CTDSP1-204ENST00000443891 CHL1O00533 1208 aa21.35■■□□□ 1.01
CTDSP1-204ENST00000443891 DDNO94850 711 aaPredicted RBP21.35■■□□□ 1.01
CTDSP1-204ENST00000443891 SUSD4Q5VX71 490 aa21.35■■□□□ 1.01
CTDSP1-204ENST00000443891 NUTM1Q86Y26 1132 aa21.35■■□□□ 1.01
CTDSP1-204ENST00000443891 ABCC12Q96J65 1359 aa21.35■■□□□ 1.01
CTDSP1-204ENST00000443891 NTSR2O95665 410 aa21.34■■□□□ 1.01
CTDSP1-204ENST00000443891 HOXB7P09629 217 aa21.34■■□□□ 1.01
CTDSP1-204ENST00000443891 EIF2S2P20042 333 aaKnown RBP21.34■■□□□ 1.01
CTDSP1-204ENST00000443891 GPTP24298 496 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms