RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 CHL1O00533 1208 aa27.48■■□□□ 1.99
CDKN3-204ENST00000442975 ST5P78524 1137 aa27.48■■□□□ 1.99
CDKN3-204ENST00000442975 KRT24Q2M2I5 525 aa27.48■■□□□ 1.99
CDKN3-204ENST00000442975 NBPF5PQ86XG9 351 aaPredicted RBP27.48■■□□□ 1.99
CDKN3-204ENST00000442975 NECTIN2Q92692 538 aa27.48■■□□□ 1.99
CDKN3-204ENST00000442975 HLFQ16534 295 aa27.47■■□□□ 1.99
CDKN3-204ENST00000442975 TTLL7Q6ZT98 887 aa27.47■■□□□ 1.99
CDKN3-204ENST00000442975 SENP3-EIF4A1A0A087X0R7 540 aa27.46■■□□□ 1.99
CDKN3-204ENST00000442975 FAM177BA6PVY3 158 aa27.46■■□□□ 1.99
CDKN3-204ENST00000442975 H0YIN7 160 aa27.46■■□□□ 1.99
CDKN3-204ENST00000442975 ZBTB3Q9H5J0 574 aa27.46■■□□□ 1.99
CDKN3-204ENST00000442975 ATP10DQ9P241 1426 aa27.46■■□□□ 1.99
CDKN3-204ENST00000442975 MAP3K15Q6ZN16 1313 aa27.45■■□□□ 1.99
CDKN3-204ENST00000442975 BRIP1Q9BX63 1249 aa27.45■■□□□ 1.98
CDKN3-204ENST00000442975 RGL2O15211 777 aa27.44■■□□□ 1.98
CDKN3-204ENST00000442975 ANXA1P04083 346 aa27.44■■□□□ 1.98
CDKN3-204ENST00000442975 PDE6BP35913 854 aa27.44■■□□□ 1.98
CDKN3-204ENST00000442975 CFAP44Q96MT7 982 aa27.44■■□□□ 1.98
CDKN3-204ENST00000442975 CALD1Q05682 793 aaKnown RBP27.43■■□□□ 1.98
CDKN3-204ENST00000442975 PROSER3Q2NL68 480 aa27.43■■□□□ 1.98
CDKN3-204ENST00000442975 ZNF622Q969S3 477 aaKnown RBP eCLIP27.42■■□□□ 1.98
CDKN3-204ENST00000442975 MBIPQ9NS73 344 aa27.42■■□□□ 1.98
CDKN3-204ENST00000442975 ADCY9O60503 1353 aa27.42■■□□□ 1.98
CDKN3-204ENST00000442975 BRCA1P38398 1863 aaKnown RBP27.42■■□□□ 1.98
CDKN3-204ENST00000442975 ERVV-1B6SEH8 477 aa27.41■■□□□ 1.98
CDKN3-204ENST00000442975 TTLL6Q8N841 843 aa27.41■■□□□ 1.98
CDKN3-204ENST00000442975 GPTP24298 496 aa27.4■■□□□ 1.98
CDKN3-204ENST00000442975 PDIA6Q15084 440 aa27.4■■□□□ 1.98
CDKN3-204ENST00000442975 HDGFL1Q5TGJ6 251 aa27.4■■□□□ 1.98
CDKN3-204ENST00000442975 ZNF526Q8TF50 670 aaPredicted RBP27.4■■□□□ 1.98
CDKN3-204ENST00000442975 IFT57Q9NWB7 429 aa27.4■■□□□ 1.98
CDKN3-204ENST00000442975 GTF2E1P29083 439 aaPredicted RBP27.38■■□□□ 1.97
CDKN3-204ENST00000442975 GNAI1P63096 354 aa27.38■■□□□ 1.97
CDKN3-204ENST00000442975 TPTE2Q6XPS3 522 aa27.38■■□□□ 1.97
CDKN3-204ENST00000442975 PDZRN3Q9UPQ7 1066 aa27.38■■□□□ 1.97
CDKN3-204ENST00000442975 LRP10Q7Z4F1 713 aa27.37■■□□□ 1.97
CDKN3-204ENST00000442975 CHPF2Q9P2E5 772 aa27.37■■□□□ 1.97
CDKN3-204ENST00000442975 HOXB7P09629 217 aa27.36■■□□□ 1.97
CDKN3-204ENST00000442975 AIMP1Q12904 312 aaKnown RBP27.36■■□□□ 1.97
CDKN3-204ENST00000442975 COL11A2P13942 1736 aaPredicted RBP27.36■■□□□ 1.97
CDKN3-204ENST00000442975 ZNF853P0CG23 659 aa27.35■■□□□ 1.97
CDKN3-204ENST00000442975 DUSP27Q5VZP5 1158 aa27.35■■□□□ 1.97
CDKN3-204ENST00000442975 XAGE3Q8WTP9 111 aa27.35■■□□□ 1.97
CDKN3-204ENST00000442975 DDX21Q9NR30 783 aaKnown RBP eCLIP27.35■■□□□ 1.97
CDKN3-204ENST00000442975 ZNF219Q9P2Y4 722 aaPredicted RBP27.35■■□□□ 1.97
CDKN3-204ENST00000442975 ANKRD31Q8N7Z5 1873 aa27.35■■□□□ 1.97
CDKN3-204ENST00000442975 DLEC1Q9Y238 1755 aa27.35■■□□□ 1.97
CDKN3-204ENST00000442975 C9orf131Q5VYM1 1079 aa27.34■■□□□ 1.97
CDKN3-204ENST00000442975 NYXQ9GZU5 481 aa27.34■■□□□ 1.97
CDKN3-204ENST00000442975 GPBP1L1Q9HC44 474 aaPredicted RBP27.34■■□□□ 1.97
CDKN3-204ENST00000442975 UBN2Q6ZU65 1347 aa27.34■■□□□ 1.97
CDKN3-204ENST00000442975 ARFGEF1Q9Y6D6 1849 aa27.33■■□□□ 1.97
CDKN3-204ENST00000442975 RASSF7Q02833 373 aa27.33■■□□□ 1.97
CDKN3-204ENST00000442975 GIGYF2Q6Y7W6 1299 aaKnown RBP27.33■■□□□ 1.97
CDKN3-204ENST00000442975 COPS6Q7L5N1 327 aa27.33■■□□□ 1.97
CDKN3-204ENST00000442975 NUTM1Q86Y26 1132 aa27.33■■□□□ 1.97
CDKN3-204ENST00000442975 ABCC12Q96J65 1359 aa27.33■■□□□ 1.97
CDKN3-204ENST00000442975 SRGNP10124 158 aa27.32■■□□□ 1.96
CDKN3-204ENST00000442975 ELL2O00472 640 aaPredicted RBP27.31■■□□□ 1.96
CDKN3-204ENST00000442975 STYK1Q6J9G0 422 aa27.31■■□□□ 1.96
CDKN3-204ENST00000442975 CNKSR1Q969H4 720 aa27.31■■□□□ 1.96
CDKN3-204ENST00000442975 MASTLQ96GX5 879 aa27.31■■□□□ 1.96
CDKN3-204ENST00000442975 RNF181Q9P0P0 153 aa27.31■■□□□ 1.96
CDKN3-204ENST00000442975 PRPF40BQ6NWY9 871 aaKnown RBP27.3■■□□□ 1.96
CDKN3-204ENST00000442975 C21orf2O43822 256 aa27.29■■□□□ 1.96
CDKN3-204ENST00000442975 CCDC27Q2M243 656 aa27.29■■□□□ 1.96
CDKN3-204ENST00000442975 ERFEQ4G0M1 354 aa27.29■■□□□ 1.96
CDKN3-204ENST00000442975 ZNF34Q8IZ26 560 aa27.29■■□□□ 1.96
CDKN3-204ENST00000442975 FAM9BQ8IZU0 186 aa27.29■■□□□ 1.96
CDKN3-204ENST00000442975 DBF4Q9UBU7 674 aaPredicted RBP27.29■■□□□ 1.96
CDKN3-204ENST00000442975 SALL2Q9Y467 1007 aaPredicted RBP27.29■■□□□ 1.96
CDKN3-204ENST00000442975 IBTKQ9P2D0 1353 aaPredicted RBP27.29■■□□□ 1.96
CDKN3-204ENST00000442975 SUSD4Q5VX71 490 aa27.28■■□□□ 1.96
CDKN3-204ENST00000442975 WWC1Q8IX03 1113 aa27.28■■□□□ 1.96
CDKN3-204ENST00000442975 TSR2Q969E8 191 aaKnown RBP27.28■■□□□ 1.96
CDKN3-204ENST00000442975 NPR1P16066 1061 aa27.27■■□□□ 1.96
CDKN3-204ENST00000442975 PARP10Q53GL7 1025 aa27.26■■□□□ 1.95
CDKN3-204ENST00000442975 HSP90AB3PQ58FF7 597 aa27.26■■□□□ 1.95
CDKN3-204ENST00000442975 NFKBIEO00221 500 aa27.25■■□□□ 1.95
CDKN3-204ENST00000442975 NTSR2O95665 410 aa27.25■■□□□ 1.95
CDKN3-204ENST00000442975 PPP1R42Q7Z4L9 355 aa27.25■■□□□ 1.95
CDKN3-204ENST00000442975 C8orf58Q8NAV2 365 aa27.25■■□□□ 1.95
CDKN3-204ENST00000442975 TNRC6CQ9HCJ0 1690 aaKnown RBP27.24■■□□□ 1.95
CDKN3-204ENST00000442975 HYPKQ9NX55 129 aa27.24■■□□□ 1.95
CDKN3-204ENST00000442975 KLRG2A4D1S0 409 aaPredicted RBP27.23■■□□□ 1.95
CDKN3-204ENST00000442975 LMNB1P20700 586 aa27.23■■□□□ 1.95
CDKN3-204ENST00000442975 UTP14AQ9BVJ6 771 aaKnown RBP27.23■■□□□ 1.95
CDKN3-204ENST00000442975 NUP98P52948 1817 aa27.23■■□□□ 1.95
CDKN3-204ENST00000442975 C1QTNF8P60827 252 aa27.21■■□□□ 1.95
CDKN3-204ENST00000442975 RPGRQ92834 1020 aaKnown RBP27.21■■□□□ 1.95
CDKN3-204ENST00000442975 ZNF428Q96B54 188 aa27.21■■□□□ 1.95
CDKN3-204ENST00000442975 TCIRG1Q13488 830 aa27.2■■□□□ 1.94
CDKN3-204ENST00000442975 RIC1Q4ADV7 1423 aa27.2■■□□□ 1.94
CDKN3-204ENST00000442975 SOGA3Q5TF21 947 aa27.2■■□□□ 1.94
CDKN3-204ENST00000442975 NLRP10Q86W26 655 aa27.2■■□□□ 1.94
CDKN3-204ENST00000442975 TSPYL6Q8N831 410 aa27.2■■□□□ 1.94
CDKN3-204ENST00000442975 PLBD2Q8NHP8 589 aa27.2■■□□□ 1.94
CDKN3-204ENST00000442975 IL16Q14005 1332 aa27.19■■□□□ 1.94
CDKN3-204ENST00000442975 PRELPP51888 382 aa27.19■■□□□ 1.94
CDKN3-204ENST00000442975 GOLGA2Q08379 1002 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms