RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 ZNF622Q969S3 477 aaKnown RBP eCLIP11.19□□□□□ -0.625e-19■■□□□ 13.6
TOP3B-209ENST00000442653 ZNF219Q9P2Y4 722 aaPredicted RBP11.19□□□□□ -0.62
TOP3B-209ENST00000442653 USP16Q9Y5T5 823 aa11.19□□□□□ -0.62
TOP3B-209ENST00000442653 FER1L6Q2WGJ9 1857 aa11.19□□□□□ -0.62
TOP3B-209ENST00000442653 MCM10Q7L590 875 aa11.18□□□□□ -0.62
TOP3B-209ENST00000442653 SETDB2Q96T68 719 aa11.18□□□□□ -0.62
TOP3B-209ENST00000442653 SLX4Q8IY92 1834 aa11.17□□□□□ -0.62
TOP3B-209ENST00000442653 U2AF1L5P0DN76 240 aaPredicted RBP11.17□□□□□ -0.62
TOP3B-209ENST00000442653 PPP2R1AP30153 589 aa11.17□□□□□ -0.62
TOP3B-209ENST00000442653 U2AF1Q01081 240 aaKnown RBP eCLIP11.17□□□□□ -0.62
TOP3B-209ENST00000442653 PRPF40BQ6NWY9 871 aaKnown RBP11.17□□□□□ -0.62
TOP3B-209ENST00000442653 DZIP3Q86Y13 1208 aaKnown RBP11.17□□□□□ -0.62
TOP3B-209ENST00000442653 CFAP53Q96M91 514 aa11.17□□□□□ -0.62
TOP3B-209ENST00000442653 PDZRN3Q9UPQ7 1066 aa11.17□□□□□ -0.62
TOP3B-209ENST00000442653 DICER1Q9UPY3 1922 aaKnown RBP11.16□□□□□ -0.62
TOP3B-209ENST00000442653 NBPF26B4DH59 902 aa11.16□□□□□ -0.62
TOP3B-209ENST00000442653 SRGNP10124 158 aa11.16□□□□□ -0.62
TOP3B-209ENST00000442653 DCTN1Q14203 1278 aa11.16□□□□□ -0.62
TOP3B-209ENST00000442653 ERFEQ4G0M1 354 aa11.16□□□□□ -0.62
TOP3B-209ENST00000442653 NBPF10Q6P3W6 841 aaKnown RBP11.16□□□□□ -0.62
TOP3B-209ENST00000442653 NBPF15Q8N660 670 aa11.16□□□□□ -0.62
TOP3B-209ENST00000442653 U3KPZ7 1027 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-209ENST00000442653 CACNA1SQ13698 1873 aa11.16□□□□□ -0.62
TOP3B-209ENST00000442653 LTBP3Q9NS15 1303 aa11.15□□□□□ -0.62
TOP3B-209ENST00000442653 NPHP1O15259 732 aa11.15□□□□□ -0.62
TOP3B-209ENST00000442653 SNRPA1P09661 255 aaKnown RBP11.15□□□□□ -0.62
TOP3B-209ENST00000442653 ST5P78524 1137 aa11.15□□□□□ -0.62
TOP3B-209ENST00000442653 COL13A1Q5TAT6 717 aaPredicted RBP11.15□□□□□ -0.62
TOP3B-209ENST00000442653 STYK1Q6J9G0 422 aa11.15□□□□□ -0.62
TOP3B-209ENST00000442653 NPM2Q86SE8 214 aaKnown RBP11.15□□□□□ -0.62
TOP3B-209ENST00000442653 TAOK3Q9H2K8 898 aa11.15□□□□□ -0.62
TOP3B-209ENST00000442653 ARFGEF2Q9Y6D5 1785 aa11.15□□□□□ -0.62
TOP3B-209ENST00000442653 NBPF5PQ86XG9 351 aaPredicted RBP11.14□□□□□ -0.63
TOP3B-209ENST00000442653 C7orf43Q8WVR3 580 aa11.14□□□□□ -0.63
TOP3B-209ENST00000442653 RTF1Q92541 710 aaKnown RBP11.14□□□□□ -0.63
TOP3B-209ENST00000442653 CNKSR1Q969H4 720 aa11.14□□□□□ -0.63
TOP3B-209ENST00000442653 MASTLQ96GX5 879 aa11.14□□□□□ -0.63
TOP3B-209ENST00000442653 NUDCQ9Y266 331 aa11.14□□□□□ -0.63
TOP3B-209ENST00000442653 DDNO94850 711 aaPredicted RBP11.13□□□□□ -0.63
TOP3B-209ENST00000442653 MYCNP04198 464 aaPredicted RBP11.13□□□□□ -0.63
TOP3B-209ENST00000442653 POTEIP0CG38 1075 aa11.13□□□□□ -0.63
TOP3B-209ENST00000442653 POTEJP0CG39 1038 aa11.13□□□□□ -0.63
TOP3B-209ENST00000442653 DPY19L2Q6NUT2 758 aa11.13□□□□□ -0.63
TOP3B-209ENST00000442653 OLFM4Q6UX06 510 aa11.13□□□□□ -0.63
TOP3B-209ENST00000442653 CLEC4GQ6UXB4 293 aa11.13□□□□□ -0.63
TOP3B-209ENST00000442653 MIS18AQ9NYP9 233 aa11.13□□□□□ -0.63
TOP3B-209ENST00000442653 KLRG2A4D1S0 409 aaPredicted RBP11.12□□□□□ -0.63
TOP3B-209ENST00000442653 NIP7Q9Y221 180 aaKnown RBP eCLIP11.12□□□□□ -0.63
TOP3B-209ENST00000442653 ZNF652Q9Y2D9 606 aa11.12□□□□□ -0.63
TOP3B-209ENST00000442653 HTATSF1O43719 755 aaKnown RBP11.11□□□□□ -0.63
TOP3B-209ENST00000442653 NPR1P16066 1061 aa11.11□□□□□ -0.63
TOP3B-209ENST00000442653 TAF7Q15545 349 aaPredicted RBP11.11□□□□□ -0.63
TOP3B-209ENST00000442653 HLFQ16534 295 aa11.11□□□□□ -0.63
TOP3B-209ENST00000442653 SOGA3Q5TF21 947 aa11.11□□□□□ -0.63
TOP3B-209ENST00000442653 LAMB4A4D0S4 1761 aa11.11□□□□□ -0.63
TOP3B-209ENST00000442653 FAM177BA6PVY3 158 aa11.1□□□□□ -0.63
TOP3B-209ENST00000442653 RGL2O15211 777 aa11.1□□□□□ -0.63
TOP3B-209ENST00000442653 CCDC93Q567U6 631 aa11.1□□□□□ -0.63
TOP3B-209ENST00000442653 CHADLQ6NUI6 762 aa11.1□□□□□ -0.63
TOP3B-209ENST00000442653 RNF39Q9H2S5 420 aa11.1□□□□□ -0.63
TOP3B-209ENST00000442653 DLG5Q8TDM6 1919 aa11.09□□□□□ -0.63
TOP3B-209ENST00000442653 KDM3BQ7LBC6 1761 aa11.09□□□□□ -0.63
TOP3B-209ENST00000442653 ABCC12Q96J65 1359 aa11.09□□□□□ -0.63
TOP3B-209ENST00000442653 TPTE2Q6XPS3 522 aa11.09□□□□□ -0.63
TOP3B-209ENST00000442653 L3MBTL3Q96JM7 780 aaPredicted RBP11.09□□□□□ -0.63
TOP3B-209ENST00000442653 THUMPD2Q9BTF0 503 aaKnown RBP11.09□□□□□ -0.63
TOP3B-209ENST00000442653 ZNF277Q9NRM2 450 aaPredicted RBP11.09□□□□□ -0.63
TOP3B-209ENST00000442653 ZNF541Q9H0D2 1346 aa11.09□□□□□ -0.63
TOP3B-209ENST00000442653 HSPA1AP0DMV8 641 aaKnown RBP11.08□□□□□ -0.64
TOP3B-209ENST00000442653 HSPA1BP0DMV9 641 aaKnown RBP11.08□□□□□ -0.64
TOP3B-209ENST00000442653 FKBP4Q02790 459 aaKnown RBP eCLIP11.08□□□□□ -0.64
TOP3B-209ENST00000442653 PLEKHF1Q96S99 279 aa11.08□□□□□ -0.64
TOP3B-209ENST00000442653 SNED1Q8TER0 1413 aa11.08□□□□□ -0.64
TOP3B-209ENST00000442653 EIF4A1P60842 406 aaKnown RBP11.07□□□□□ -0.64
TOP3B-209ENST00000442653 CRY2Q49AN0 593 aa11.07□□□□□ -0.64
TOP3B-209ENST00000442653 TTLL7Q6ZT98 887 aa11.07□□□□□ -0.64
TOP3B-209ENST00000442653 SLC51AQ86UW1 340 aa11.07□□□□□ -0.64
TOP3B-209ENST00000442653 NUTM1Q86Y26 1132 aa11.07□□□□□ -0.64
TOP3B-209ENST00000442653 NGEFQ8N5V2 710 aa11.07□□□□□ -0.64
TOP3B-209ENST00000442653 TAF1DQ9H5J8 278 aaPredicted RBP11.07□□□□□ -0.64
TOP3B-209ENST00000442653 CREBZFQ9NS37 354 aa11.07□□□□□ -0.64
TOP3B-209ENST00000442653 SCN4AP35499 1836 aa11.07□□□□□ -0.64
TOP3B-209ENST00000442653 PASKQ96RG2 1323 aa11.07□□□□□ -0.64
TOP3B-209ENST00000442653 COL4A5P29400 1685 aa11.06□□□□□ -0.64
TOP3B-209ENST00000442653 IQCA1LA6NCM1 817 aa11.06□□□□□ -0.64
TOP3B-209ENST00000442653 CAPN15O75808 1086 aa11.06□□□□□ -0.64
TOP3B-209ENST00000442653 LDHDQ86WU2 507 aa11.06□□□□□ -0.64
TOP3B-209ENST00000442653 RTKN2Q8IZC4 609 aa11.06□□□□□ -0.64
TOP3B-209ENST00000442653 TNS4Q8IZW8 715 aa11.06□□□□□ -0.64
TOP3B-209ENST00000442653 MKRN1Q9UHC7 482 aaKnown RBP11.06□□□□□ -0.64
TOP3B-209ENST00000442653 RRP7AQ9Y3A4 280 aaKnown RBP11.06□□□□□ -0.64
TOP3B-209ENST00000442653 NUP98P52948 1817 aa11.06□□□□□ -0.64
TOP3B-209ENST00000442653 MAP3K15Q6ZN16 1313 aa11.06□□□□□ -0.64
TOP3B-209ENST00000442653 UBN2Q6ZU65 1347 aa11.06□□□□□ -0.64
TOP3B-209ENST00000442653 ERVV-1B6SEH8 477 aa11.05□□□□□ -0.64
TOP3B-209ENST00000442653 MYL6BP14649 208 aa11.05□□□□□ -0.64
TOP3B-209ENST00000442653 GPTP24298 496 aa11.05□□□□□ -0.64
TOP3B-209ENST00000442653 GTF2E1P29083 439 aaPredicted RBP11.05□□□□□ -0.64
TOP3B-209ENST00000442653 NFE2L2Q16236 605 aa11.05□□□□□ -0.64
TOP3B-209ENST00000442653 ZBTB3Q9H5J0 574 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms