RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 ZNF622Q969S3 477 aaKnown RBP eCLIP11.19□□□□□ -0.625e-19■■□□□ 13.6
TOP3B-209ENST00000442653 ZNF219Q9P2Y4 722 aaPredicted RBP11.19□□□□□ -0.62
TOP3B-209ENST00000442653 USP16Q9Y5T5 823 aa11.19□□□□□ -0.62
TOP3B-209ENST00000442653 FER1L6Q2WGJ9 1857 aa11.19□□□□□ -0.62
TOP3B-209ENST00000442653 MCM10Q7L590 875 aa11.18□□□□□ -0.62
TOP3B-209ENST00000442653 SETDB2Q96T68 719 aa11.18□□□□□ -0.62
TOP3B-209ENST00000442653 SLX4Q8IY92 1834 aa11.17□□□□□ -0.62
TOP3B-209ENST00000442653 U2AF1L5P0DN76 240 aaPredicted RBP11.17□□□□□ -0.62
TOP3B-209ENST00000442653 PPP2R1AP30153 589 aa11.17□□□□□ -0.62
TOP3B-209ENST00000442653 U2AF1Q01081 240 aaKnown RBP eCLIP11.17□□□□□ -0.62
TOP3B-209ENST00000442653 PRPF40BQ6NWY9 871 aaKnown RBP11.17□□□□□ -0.62
TOP3B-209ENST00000442653 DZIP3Q86Y13 1208 aaKnown RBP11.17□□□□□ -0.62
TOP3B-209ENST00000442653 CFAP53Q96M91 514 aa11.17□□□□□ -0.62
TOP3B-209ENST00000442653 PDZRN3Q9UPQ7 1066 aa11.17□□□□□ -0.62
TOP3B-209ENST00000442653 DICER1Q9UPY3 1922 aaKnown RBP11.16□□□□□ -0.62
TOP3B-209ENST00000442653 NBPF26B4DH59 902 aa11.16□□□□□ -0.62
TOP3B-209ENST00000442653 SRGNP10124 158 aa11.16□□□□□ -0.62
TOP3B-209ENST00000442653 DCTN1Q14203 1278 aa11.16□□□□□ -0.62
TOP3B-209ENST00000442653 ERFEQ4G0M1 354 aa11.16□□□□□ -0.62
TOP3B-209ENST00000442653 NBPF10Q6P3W6 841 aaKnown RBP11.16□□□□□ -0.62
TOP3B-209ENST00000442653 NBPF15Q8N660 670 aa11.16□□□□□ -0.62
TOP3B-209ENST00000442653 U3KPZ7 1027 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-209ENST00000442653 CACNA1SQ13698 1873 aa11.16□□□□□ -0.62
TOP3B-209ENST00000442653 LTBP3Q9NS15 1303 aa11.15□□□□□ -0.62
TOP3B-209ENST00000442653 NPHP1O15259 732 aa11.15□□□□□ -0.62
TOP3B-209ENST00000442653 SNRPA1P09661 255 aaKnown RBP11.15□□□□□ -0.62
TOP3B-209ENST00000442653 ST5P78524 1137 aa11.15□□□□□ -0.62
TOP3B-209ENST00000442653 COL13A1Q5TAT6 717 aaPredicted RBP11.15□□□□□ -0.62
TOP3B-209ENST00000442653 STYK1Q6J9G0 422 aa11.15□□□□□ -0.62
TOP3B-209ENST00000442653 NPM2Q86SE8 214 aaKnown RBP11.15□□□□□ -0.62
TOP3B-209ENST00000442653 TAOK3Q9H2K8 898 aa11.15□□□□□ -0.62
TOP3B-209ENST00000442653 ARFGEF2Q9Y6D5 1785 aa11.15□□□□□ -0.62
TOP3B-209ENST00000442653 NBPF5PQ86XG9 351 aaPredicted RBP11.14□□□□□ -0.63
TOP3B-209ENST00000442653 C7orf43Q8WVR3 580 aa11.14□□□□□ -0.63
TOP3B-209ENST00000442653 RTF1Q92541 710 aaKnown RBP11.14□□□□□ -0.63
TOP3B-209ENST00000442653 CNKSR1Q969H4 720 aa11.14□□□□□ -0.63
TOP3B-209ENST00000442653 MASTLQ96GX5 879 aa11.14□□□□□ -0.63
TOP3B-209ENST00000442653 NUDCQ9Y266 331 aa11.14□□□□□ -0.63
TOP3B-209ENST00000442653 DDNO94850 711 aaPredicted RBP11.13□□□□□ -0.63
TOP3B-209ENST00000442653 MYCNP04198 464 aaPredicted RBP11.13□□□□□ -0.63
TOP3B-209ENST00000442653 POTEIP0CG38 1075 aa11.13□□□□□ -0.63
TOP3B-209ENST00000442653 POTEJP0CG39 1038 aa11.13□□□□□ -0.63
TOP3B-209ENST00000442653 DPY19L2Q6NUT2 758 aa11.13□□□□□ -0.63
TOP3B-209ENST00000442653 OLFM4Q6UX06 510 aa11.13□□□□□ -0.63
TOP3B-209ENST00000442653 CLEC4GQ6UXB4 293 aa11.13□□□□□ -0.63
TOP3B-209ENST00000442653 MIS18AQ9NYP9 233 aa11.13□□□□□ -0.63
TOP3B-209ENST00000442653 KLRG2A4D1S0 409 aaPredicted RBP11.12□□□□□ -0.63
TOP3B-209ENST00000442653 NIP7Q9Y221 180 aaKnown RBP eCLIP11.12□□□□□ -0.63
TOP3B-209ENST00000442653 ZNF652Q9Y2D9 606 aa11.12□□□□□ -0.63
TOP3B-209ENST00000442653 HTATSF1O43719 755 aaKnown RBP11.11□□□□□ -0.63
TOP3B-209ENST00000442653 NPR1P16066 1061 aa11.11□□□□□ -0.63
TOP3B-209ENST00000442653 TAF7Q15545 349 aaPredicted RBP11.11□□□□□ -0.63
TOP3B-209ENST00000442653 HLFQ16534 295 aa11.11□□□□□ -0.63
TOP3B-209ENST00000442653 SOGA3Q5TF21 947 aa11.11□□□□□ -0.63
TOP3B-209ENST00000442653 LAMB4A4D0S4 1761 aa11.11□□□□□ -0.63
TOP3B-209ENST00000442653 FAM177BA6PVY3 158 aa11.1□□□□□ -0.63
TOP3B-209ENST00000442653 RGL2O15211 777 aa11.1□□□□□ -0.63
TOP3B-209ENST00000442653 CCDC93Q567U6 631 aa11.1□□□□□ -0.63
TOP3B-209ENST00000442653 CHADLQ6NUI6 762 aa11.1□□□□□ -0.63
TOP3B-209ENST00000442653 RNF39Q9H2S5 420 aa11.1□□□□□ -0.63
TOP3B-209ENST00000442653 DLG5Q8TDM6 1919 aa11.09□□□□□ -0.63
TOP3B-209ENST00000442653 KDM3BQ7LBC6 1761 aa11.09□□□□□ -0.63
TOP3B-209ENST00000442653 ABCC12Q96J65 1359 aa11.09□□□□□ -0.63
TOP3B-209ENST00000442653 TPTE2Q6XPS3 522 aa11.09□□□□□ -0.63
TOP3B-209ENST00000442653 L3MBTL3Q96JM7 780 aaPredicted RBP11.09□□□□□ -0.63
TOP3B-209ENST00000442653 THUMPD2Q9BTF0 503 aaKnown RBP11.09□□□□□ -0.63
TOP3B-209ENST00000442653 ZNF277Q9NRM2 450 aaPredicted RBP11.09□□□□□ -0.63
TOP3B-209ENST00000442653 ZNF541Q9H0D2 1346 aa11.09□□□□□ -0.63
TOP3B-209ENST00000442653 HSPA1AP0DMV8 641 aaKnown RBP11.08□□□□□ -0.64
TOP3B-209ENST00000442653 HSPA1BP0DMV9 641 aaKnown RBP11.08□□□□□ -0.64
TOP3B-209ENST00000442653 FKBP4Q02790 459 aaKnown RBP eCLIP11.08□□□□□ -0.64
TOP3B-209ENST00000442653 PLEKHF1Q96S99 279 aa11.08□□□□□ -0.64
TOP3B-209ENST00000442653 SNED1Q8TER0 1413 aa11.08□□□□□ -0.64
TOP3B-209ENST00000442653 EIF4A1P60842 406 aaKnown RBP11.07□□□□□ -0.64
TOP3B-209ENST00000442653 CRY2Q49AN0 593 aa11.07□□□□□ -0.64
TOP3B-209ENST00000442653 TTLL7Q6ZT98 887 aa11.07□□□□□ -0.64
TOP3B-209ENST00000442653 SLC51AQ86UW1 340 aa11.07□□□□□ -0.64
TOP3B-209ENST00000442653 NUTM1Q86Y26 1132 aa11.07□□□□□ -0.64
TOP3B-209ENST00000442653 NGEFQ8N5V2 710 aa11.07□□□□□ -0.64
TOP3B-209ENST00000442653 TAF1DQ9H5J8 278 aaPredicted RBP11.07□□□□□ -0.64
TOP3B-209ENST00000442653 CREBZFQ9NS37 354 aa11.07□□□□□ -0.64
TOP3B-209ENST00000442653 SCN4AP35499 1836 aa11.07□□□□□ -0.64
TOP3B-209ENST00000442653 PASKQ96RG2 1323 aa11.07□□□□□ -0.64
TOP3B-209ENST00000442653 COL4A5P29400 1685 aa11.06□□□□□ -0.64
TOP3B-209ENST00000442653 IQCA1LA6NCM1 817 aa11.06□□□□□ -0.64
TOP3B-209ENST00000442653 CAPN15O75808 1086 aa11.06□□□□□ -0.64
TOP3B-209ENST00000442653 LDHDQ86WU2 507 aa11.06□□□□□ -0.64
TOP3B-209ENST00000442653 RTKN2Q8IZC4 609 aa11.06□□□□□ -0.64
TOP3B-209ENST00000442653 TNS4Q8IZW8 715 aa11.06□□□□□ -0.64
TOP3B-209ENST00000442653 MKRN1Q9UHC7 482 aaKnown RBP11.06□□□□□ -0.64
TOP3B-209ENST00000442653 RRP7AQ9Y3A4 280 aaKnown RBP11.06□□□□□ -0.64
TOP3B-209ENST00000442653 NUP98P52948 1817 aa11.06□□□□□ -0.64
TOP3B-209ENST00000442653 MAP3K15Q6ZN16 1313 aa11.06□□□□□ -0.64
TOP3B-209ENST00000442653 UBN2Q6ZU65 1347 aa11.06□□□□□ -0.64
TOP3B-209ENST00000442653 ERVV-1B6SEH8 477 aa11.05□□□□□ -0.64
TOP3B-209ENST00000442653 MYL6BP14649 208 aa11.05□□□□□ -0.64
TOP3B-209ENST00000442653 GPTP24298 496 aa11.05□□□□□ -0.64
TOP3B-209ENST00000442653 GTF2E1P29083 439 aaPredicted RBP11.05□□□□□ -0.64
TOP3B-209ENST00000442653 NFE2L2Q16236 605 aa11.05□□□□□ -0.64
TOP3B-209ENST00000442653 ZBTB3Q9H5J0 574 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms