RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 CCDC24Q8N4L8 307 aa19■□□□□ 0.63
PTPRN-206ENST00000442029 NBPF15Q8N660 670 aa19■□□□□ 0.63
PTPRN-206ENST00000442029 DICER1Q9UPY3 1922 aaKnown RBP19■□□□□ 0.63
PTPRN-206ENST00000442029 NBPF5PQ86XG9 351 aaPredicted RBP18.99■□□□□ 0.63
PTPRN-206ENST00000442029 TSPYL4Q9UJ04 414 aa18.99■□□□□ 0.63
PTPRN-206ENST00000442029 TIAM2Q8IVF5 1701 aa18.99■□□□□ 0.63
PTPRN-206ENST00000442029 FER1L6Q2WGJ9 1857 aa18.99■□□□□ 0.63
PTPRN-206ENST00000442029 TMPOP42166 694 aaKnown RBP18.98■□□□□ 0.63
PTPRN-206ENST00000442029 NGEFQ8N5V2 710 aa18.98■□□□□ 0.63
PTPRN-206ENST00000442029 NIP7Q9Y221 180 aaKnown RBP eCLIP18.98■□□□□ 0.63
PTPRN-206ENST00000442029 TNRC6CQ9HCJ0 1690 aaKnown RBP18.98■□□□□ 0.63
PTPRN-206ENST00000442029 SLX4Q8IY92 1834 aa18.97■□□□□ 0.63
PTPRN-206ENST00000442029 NEUROD2Q15784 382 aa18.97■□□□□ 0.63
PTPRN-206ENST00000442029 CCDC146Q8IYE0 955 aa18.97■□□□□ 0.63
PTPRN-206ENST00000442029 RRP7AQ9Y3A4 280 aaKnown RBP18.97■□□□□ 0.63
PTPRN-206ENST00000442029 RGL2O15211 777 aa18.96■□□□□ 0.63
PTPRN-206ENST00000442029 RASSF7Q02833 373 aa18.96■□□□□ 0.63
PTPRN-206ENST00000442029 KIF6Q6ZMV9 814 aa18.96■□□□□ 0.63
PTPRN-206ENST00000442029 KDM2BQ8NHM5 1336 aa18.96■□□□□ 0.63
PTPRN-206ENST00000442029 KIF3CO14782 793 aa18.95■□□□□ 0.62
PTPRN-206ENST00000442029 MYL6BP14649 208 aa18.95■□□□□ 0.62
PTPRN-206ENST00000442029 GTF2E1P29083 439 aaPredicted RBP18.95■□□□□ 0.62
PTPRN-206ENST00000442029 TPTE2Q6XPS3 522 aa18.95■□□□□ 0.62
PTPRN-206ENST00000442029 CNKSR1Q969H4 720 aa18.95■□□□□ 0.62
PTPRN-206ENST00000442029 RUNDC1Q96C34 613 aa18.95■□□□□ 0.62
PTPRN-206ENST00000442029 ZNF219Q9P2Y4 722 aaPredicted RBP18.95■□□□□ 0.62
PTPRN-206ENST00000442029 FAM177BA6PVY3 158 aa18.94■□□□□ 0.62
PTPRN-206ENST00000442029 LMNB1P20700 586 aa18.94■□□□□ 0.62
PTPRN-206ENST00000442029 MASTLQ96GX5 879 aa18.94■□□□□ 0.62
PTPRN-206ENST00000442029 PRKRIP1Q9H875 184 aaPredicted RBP18.94■□□□□ 0.62
PTPRN-206ENST00000442029 BABAM1Q9NWV8 329 aa18.94■□□□□ 0.62
PTPRN-206ENST00000442029 HLFQ16534 295 aa18.93■□□□□ 0.62
PTPRN-206ENST00000442029 STYK1Q6J9G0 422 aa18.93■□□□□ 0.62
PTPRN-206ENST00000442029 C16orf71Q8IYS4 520 aaPredicted RBP18.93■□□□□ 0.62
PTPRN-206ENST00000442029 ERBB4Q15303 1308 aa18.93■□□□□ 0.62
PTPRN-206ENST00000442029 ERVV-1B6SEH8 477 aa18.92■□□□□ 0.62
PTPRN-206ENST00000442029 C21orf2O43822 256 aa18.92■□□□□ 0.62
PTPRN-206ENST00000442029 EIF2S2P20042 333 aaKnown RBP18.92■□□□□ 0.62
PTPRN-206ENST00000442029 ZEB1P37275 1124 aaPredicted RBP18.92■□□□□ 0.62
PTPRN-206ENST00000442029 NMRK2Q9NPI5 230 aa18.92■□□□□ 0.62
PTPRN-206ENST00000442029 MAP3K15Q6ZN16 1313 aa18.92■□□□□ 0.62
PTPRN-206ENST00000442029 ZC3H4Q9UPT8 1303 aaKnown RBP18.92■□□□□ 0.62
PTPRN-206ENST00000442029 ANKRD36CQ5JPF3 1778 aa18.91■□□□□ 0.62
PTPRN-206ENST00000442029 SRGNP10124 158 aa18.91■□□□□ 0.62
PTPRN-206ENST00000442029 NYXQ9GZU5 481 aa18.91■□□□□ 0.62
PTPRN-206ENST00000442029 ADAMTS8Q9UP79 889 aa18.91■□□□□ 0.62
PTPRN-206ENST00000442029 LAS1LQ9Y4W2 734 aaKnown RBP18.91■□□□□ 0.62
PTPRN-206ENST00000442029 TOMM70O94826 608 aa18.9■□□□□ 0.62
PTPRN-206ENST00000442029 SOGA3Q5TF21 947 aa18.9■□□□□ 0.62
PTPRN-206ENST00000442029 TTLL7Q6ZT98 887 aa18.9■□□□□ 0.62
PTPRN-206ENST00000442029 ZBTB3Q9H5J0 574 aa18.9■□□□□ 0.62
PTPRN-206ENST00000442029 NFKBIEO00221 500 aa18.89■□□□□ 0.61
PTPRN-206ENST00000442029 HSPA6P17066 643 aa18.89■□□□□ 0.61
PTPRN-206ENST00000442029 PRPF40BQ6NWY9 871 aaKnown RBP18.89■□□□□ 0.61
PTPRN-206ENST00000442029 NPR1P16066 1061 aa18.88■□□□□ 0.61
PTPRN-206ENST00000442029 TAOK3Q9H2K8 898 aa18.87■□□□□ 0.61
PTPRN-206ENST00000442029 RRAGCQ9HB90 399 aa18.87■□□□□ 0.61
PTPRN-206ENST00000442029 GPTP24298 496 aa18.86■□□□□ 0.61
PTPRN-206ENST00000442029 TRIM35Q9UPQ4 493 aa18.86■□□□□ 0.61
PTPRN-206ENST00000442029 GIGYF2Q6Y7W6 1299 aaKnown RBP18.85■□□□□ 0.61
PTPRN-206ENST00000442029 NUTM1Q86Y26 1132 aa18.85■□□□□ 0.61
PTPRN-206ENST00000442029 NECTIN2Q92692 538 aa18.85■□□□□ 0.61
PTPRN-206ENST00000442029 IBTKQ9P2D0 1353 aaPredicted RBP18.84■□□□□ 0.61
PTPRN-206ENST00000442029 LTBP3Q9NS15 1303 aa18.84■□□□□ 0.61
PTPRN-206ENST00000442029 GLTPD2A6NH11 291 aa18.84■□□□□ 0.61
PTPRN-206ENST00000442029 CHL1O00533 1208 aa18.84■□□□□ 0.61
PTPRN-206ENST00000442029 ALDH1B1P30837 517 aa18.84■□□□□ 0.61
PTPRN-206ENST00000442029 PRELPP51888 382 aa18.84■□□□□ 0.61
PTPRN-206ENST00000442029 ERFEQ4G0M1 354 aa18.84■□□□□ 0.61
PTPRN-206ENST00000442029 CCDC93Q567U6 631 aa18.84■□□□□ 0.61
PTPRN-206ENST00000442029 DPY19L2Q6NUT2 758 aa18.84■□□□□ 0.61
PTPRN-206ENST00000442029 RBM46Q8TBY0 533 aaKnown RBP18.84■□□□□ 0.61
PTPRN-206ENST00000442029 KLRG2A4D1S0 409 aaPredicted RBP18.83■□□□□ 0.6
PTPRN-206ENST00000442029 ANXA1P04083 346 aa18.83■□□□□ 0.6
PTPRN-206ENST00000442029 PDIA6Q15084 440 aa18.83■□□□□ 0.6
PTPRN-206ENST00000442029 PPP1R42Q7Z4L9 355 aa18.83■□□□□ 0.6
PTPRN-206ENST00000442029 ABCC12Q96J65 1359 aa18.82■□□□□ 0.6
PTPRN-206ENST00000442029 UBN2Q6ZU65 1347 aa18.82■□□□□ 0.6
PTPRN-206ENST00000442029 AIMP1Q12904 312 aaKnown RBP18.82■□□□□ 0.6
PTPRN-206ENST00000442029 PROSER3Q2NL68 480 aa18.82■□□□□ 0.6
PTPRN-206ENST00000442029 PARP10Q53GL7 1025 aa18.82■□□□□ 0.6
PTPRN-206ENST00000442029 ZNF34Q8IZ26 560 aa18.82■□□□□ 0.6
PTPRN-206ENST00000442029 RPGRQ92834 1020 aaKnown RBP18.82■□□□□ 0.6
PTPRN-206ENST00000442029 WDR90Q96KV7 1748 aa18.82■□□□□ 0.6
PTPRN-206ENST00000442029 LAMB2P55268 1798 aa18.81■□□□□ 0.6
PTPRN-206ENST00000442029 HSP90AB3PQ58FF7 597 aa18.81■□□□□ 0.6
PTPRN-206ENST00000442029 SUSD4Q5VX71 490 aa18.81■□□□□ 0.6
PTPRN-206ENST00000442029 APAF1O14727 1248 aa18.8■□□□□ 0.6
PTPRN-206ENST00000442029 VEGFAP15692 232 aaPredicted RBP18.8■□□□□ 0.6
PTPRN-206ENST00000442029 APLP1P51693 650 aa18.8■□□□□ 0.6
PTPRN-206ENST00000442029 CALD1Q05682 793 aaKnown RBP18.8■□□□□ 0.6
PTPRN-206ENST00000442029 KRT24Q2M2I5 525 aa18.8■□□□□ 0.6
PTPRN-206ENST00000442029 HDGFL1Q5TGJ6 251 aa18.8■□□□□ 0.6
PTPRN-206ENST00000442029 COPS6Q7L5N1 327 aa18.8■□□□□ 0.6
PTPRN-206ENST00000442029 CFAP44Q96MT7 982 aa18.8■□□□□ 0.6
PTPRN-206ENST00000442029 DDX21Q9NR30 783 aaKnown RBP eCLIP18.8■□□□□ 0.6
PTPRN-206ENST00000442029 RIC1Q4ADV7 1423 aa18.8■□□□□ 0.6
PTPRN-206ENST00000442029 HOXB7P09629 217 aa18.79■□□□□ 0.6
PTPRN-206ENST00000442029 FSTL1Q12841 308 aa18.79■□□□□ 0.6
PTPRN-206ENST00000442029 LRP10Q7Z4F1 713 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms