RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 COL6A1P12109 1028 aa4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 RFC5P40937 340 aa4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 TERF1P54274 439 aa4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 RBL2Q08999 1139 aa4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 TRIM32Q13049 653 aa4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 KCTD2Q14681 263 aa4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 GJC2Q5T442 439 aaPredicted RBP4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 PHLDB3Q6NSJ2 640 aa4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 RSBN1LQ6PCB5 846 aaPredicted RBP4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 FBXO33Q7Z6M2 555 aa4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 ZSCAN30Q86W11 494 aa4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 PAF1Q8N7H5 531 aa4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 SVIPQ8NHG7 77 aa4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 PRR7Q8TB68 274 aa4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 RSPH1Q8WYR4 309 aa4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 ZNF830Q96NB3 372 aaPredicted RBP4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 MRPL42Q9Y6G3 142 aaKnown RBP4.91□□□□□ -1.62
R3HDM1-209ENST00000441871 PALM3A6NDB9 673 aaPredicted RBP4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 DGAT1O75907 488 aa4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 PDGFRBP09619 1106 aa4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 CCNYL3P0C7X3 344 aa4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 USP5P45974 858 aa4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 TDO2P48775 406 aa4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 CALD1Q05682 793 aaKnown RBP4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 CCSAPQ6IQ19 270 aaPredicted RBP4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 MTMR14Q8NCE2 650 aa4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 PPM1EQ8WY54 764 aa4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 RUNDC1Q96C34 613 aa4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 MPHOSPH6Q99547 160 aaKnown RBP4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 CAPN10Q9HC96 672 aa4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 PRM3Q9NNZ6 103 aa4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 AVENQ9NQS1 362 aaPredicted RBP4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 CWC25Q9NXE8 425 aaPredicted RBP4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 BIN2Q9UBW5 565 aaPredicted RBP4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 NOL7Q9UMY1 257 aaKnown RBP4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 PCDHGC3Q9UN70 934 aa4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 SYNRGQ9UMZ2 1314 aa4.9□□□□□ -1.63
R3HDM1-209ENST00000441871 IFRD1O00458 451 aaPredicted RBP4.89□□□□□ -1.63
R3HDM1-209ENST00000441871 SPTLC1O15269 473 aa4.89□□□□□ -1.63
R3HDM1-209ENST00000441871 GDF9O60383 454 aa4.89□□□□□ -1.63
R3HDM1-209ENST00000441871 CTHP32929 405 aa4.89□□□□□ -1.63
R3HDM1-209ENST00000441871 PTPRNQ16849 979 aa4.89□□□□□ -1.63
R3HDM1-209ENST00000441871 TMEM259Q4ZIN3 620 aa4.89□□□□□ -1.63
R3HDM1-209ENST00000441871 SOGA3Q5TF21 947 aa4.89□□□□□ -1.63
R3HDM1-209ENST00000441871 CC2D1AQ6P1N0 951 aaPredicted RBP4.89□□□□□ -1.63
R3HDM1-209ENST00000441871 PRPF38AQ8NAV1 312 aaKnown RBP4.89□□□□□ -1.63
R3HDM1-209ENST00000441871 LSM14AQ8ND56 463 aaKnown RBP4.89□□□□□ -1.63
R3HDM1-209ENST00000441871 EMID1Q96A84 441 aaPredicted RBP4.89□□□□□ -1.63
R3HDM1-209ENST00000441871 LRRC27Q9C0I9 530 aa4.89□□□□□ -1.63
R3HDM1-209ENST00000441871 OSBPL2Q9H1P3 480 aa4.89□□□□□ -1.63
R3HDM1-209ENST00000441871 ISY1Q9ULR0 285 aaKnown RBP4.89□□□□□ -1.63
R3HDM1-209ENST00000441871 TTF2Q9UNY4 1162 aaKnown RBP4.89□□□□□ -1.63
R3HDM1-209ENST00000441871 PLIN1O60240 522 aa4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 HIP1RO75146 1068 aa4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 FOSP01100 380 aaPredicted RBP4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 FAM163BP0C2L3 166 aa4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 PDE6BP35913 854 aa4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 ANP32AP39687 249 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 PEX19P40855 299 aa4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 CLK2P49760 499 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 WNT7BP56706 349 aa4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 PSMC1P62191 440 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 ZKSCAN8Q15776 578 aaPredicted RBP4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 UVSSAQ2YD98 709 aa4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 ODR4Q5SWX8 454 aa4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 PRPF38BQ5VTL8 546 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 DESI1Q6ICB0 168 aa4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 SLC39A13Q96H72 371 aa4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 CEP89Q96ST8 783 aa4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 APBA2Q99767 749 aa4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 MUC3BQ9H195 1237 aa4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 MKRN1Q9UHC7 482 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 PRDM4Q9UKN5 801 aa4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 AKAP2Q9Y2D5 859 aa4.88□□□□□ -1.63
R3HDM1-209ENST00000441871 WNT7AO00755 349 aa4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 HMMRO75330 724 aa4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 DNAJA1P31689 397 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 FLT3P36888 993 aa4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 AMPD3Q01432 767 aa4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 PSMD2Q13200 908 aa4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 VPS72Q15906 364 aa4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 NFE2L2Q16236 605 aa4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 RGL3Q3MIN7 710 aa4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 CCDC92Q53HC0 331 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 MYSM1Q5VVJ2 828 aa4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 TRIM67Q6ZTA4 783 aa4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 EHBP1Q8NDI1 1231 aa4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 NGDNQ8NEJ9 315 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 AGBL1Q96MI9 1066 aa4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 FRMD6Q96NE9 622 aa4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 GMLQ99445 158 aa4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 ARPC5LQ9BPX5 153 aa4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 RAI14Q9P0K7 980 aa4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 TFIP11Q9UBB9 837 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-209ENST00000441871 PPP1R12AO14974 1030 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-209ENST00000441871 NPHP1O15259 732 aa4.86□□□□□ -1.63
R3HDM1-209ENST00000441871 HSP90AB1P08238 724 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms