RNA–Protein interactions for RNA: ENST00000441778.6

LDB2-202, Transcript of LIM domain binding 2, humanhuman

TSL 1 (best) BASIC

Gene LDB2, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-202ENST00000441778 SIRT1Q96EB6 747 aa10.71□□□□□ -0.69
LDB2-202ENST00000441778 EYA1Q99502 592 aa10.71□□□□□ -0.69
LDB2-202ENST00000441778 GTPBP4Q9BZE4 634 aaKnown RBP10.71□□□□□ -0.69
LDB2-202ENST00000441778 PHAXQ9H814 394 aaKnown RBP10.71□□□□□ -0.69
LDB2-202ENST00000441778 MRVI1Q9Y6F6 885 aa10.71□□□□□ -0.69
LDB2-202ENST00000441778 IGSF1Q8N6C5 1336 aa10.71□□□□□ -0.7
LDB2-202ENST00000441778 FLT4P35916 1363 aa10.7□□□□□ -0.7
LDB2-202ENST00000441778 JAKMIP1Q96N16 626 aaKnown RBP10.7□□□□□ -0.7
LDB2-202ENST00000441778 SBNO1A3KN83 1393 aa10.7□□□□□ -0.7
LDB2-202ENST00000441778 MAP3K5Q99683 1374 aa10.7□□□□□ -0.7
LDB2-202ENST00000441778 GOLGA6L6A8MZA4 724 aa10.7□□□□□ -0.7
LDB2-202ENST00000441778 LIG1P18858 919 aa10.7□□□□□ -0.7
LDB2-202ENST00000441778 ME3Q16798 604 aa10.7□□□□□ -0.7
LDB2-202ENST00000441778 VPS53Q5VIR6 699 aa10.7□□□□□ -0.7
LDB2-202ENST00000441778 LUZP1Q86V48 1076 aa10.7□□□□□ -0.7
LDB2-202ENST00000441778 NECAB1Q8N987 351 aa10.7□□□□□ -0.7
LDB2-202ENST00000441778 FAM200AQ8TCP9 573 aa10.7□□□□□ -0.7
LDB2-202ENST00000441778 DDX54Q8TDD1 881 aaKnown RBP10.7□□□□□ -0.7
LDB2-202ENST00000441778 KIF1BPQ96EK5 621 aa10.7□□□□□ -0.7
LDB2-202ENST00000441778 PDRG1Q9NUG6 133 aa10.7□□□□□ -0.7
LDB2-202ENST00000441778 SRGAP3O43295 1099 aa10.69□□□□□ -0.7
LDB2-202ENST00000441778 TYRO3Q06418 890 aa10.69□□□□□ -0.7
LDB2-202ENST00000441778 LRMPQ12912 555 aa10.69□□□□□ -0.7
LDB2-202ENST00000441778 CAMK4Q16566 473 aa10.69□□□□□ -0.7
LDB2-202ENST00000441778 PRPF40BQ6NWY9 871 aaKnown RBP10.69□□□□□ -0.7
LDB2-202ENST00000441778 ZSWIM6Q9HCJ5 1215 aa10.69□□□□□ -0.7
LDB2-202ENST00000441778 CHMP3Q9Y3E7 222 aa10.69□□□□□ -0.7
LDB2-202ENST00000441778 PLEKHG3A1L390 1219 aa10.69□□□□□ -0.7
LDB2-202ENST00000441778 NBPF7P0C2Y1 421 aaPredicted RBP10.69□□□□□ -0.7
LDB2-202ENST00000441778 NCBP1Q09161 790 aaKnown RBP10.69□□□□□ -0.7
LDB2-202ENST00000441778 COL9A3Q14050 684 aaPredicted RBP10.69□□□□□ -0.7
LDB2-202ENST00000441778 FAM173BQ6P4H8 233 aa10.69□□□□□ -0.7
LDB2-202ENST00000441778 CDC37L1Q7L3B6 337 aa10.69□□□□□ -0.7
LDB2-202ENST00000441778 NUP62CLQ9H1M0 184 aa10.69□□□□□ -0.7
LDB2-202ENST00000441778 USP42Q9H9J4 1324 aaKnown RBP10.69□□□□□ -0.7
LDB2-202ENST00000441778 MAP3K11Q16584 847 aa10.68□□□□□ -0.7
LDB2-202ENST00000441778 FERMT3Q86UX7 667 aa10.68□□□□□ -0.7
LDB2-202ENST00000441778 IL17REQ8NFR9 667 aa10.68□□□□□ -0.7
LDB2-202ENST00000441778 ZSCAN31Q96LW9 406 aaPredicted RBP10.68□□□□□ -0.7
LDB2-202ENST00000441778 SH2B1Q9NRF2 756 aaPredicted RBP10.68□□□□□ -0.7
LDB2-202ENST00000441778 AGLP35573 1532 aa10.68□□□□□ -0.7
LDB2-202ENST00000441778 NWD1Q149M9 1564 aa10.68□□□□□ -0.7
LDB2-202ENST00000441778 GNAT3A8MTJ3 354 aa10.68□□□□□ -0.7
LDB2-202ENST00000441778 HTATSF1O43719 755 aaKnown RBP10.68□□□□□ -0.7
LDB2-202ENST00000441778 CCDC186Q7Z3E2 898 aa10.68□□□□□ -0.7
LDB2-202ENST00000441778 KCNB2Q92953 911 aa10.68□□□□□ -0.7
LDB2-202ENST00000441778 CBX8Q9HC52 389 aa10.68□□□□□ -0.7
LDB2-202ENST00000441778 NRBP1Q9UHY1 535 aa10.68□□□□□ -0.7
LDB2-202ENST00000441778 TPCN1Q9ULQ1 816 aa10.68□□□□□ -0.7
LDB2-202ENST00000441778 TTC21AQ8NDW8 1320 aa10.68□□□□□ -0.7
LDB2-202ENST00000441778 RGPD8O14715 1765 aaPredicted RBP10.68□□□□□ -0.7
LDB2-202ENST00000441778 ANO6Q4KMQ2 910 aa10.67□□□□□ -0.7
LDB2-202ENST00000441778 HDGFL1Q5TGJ6 251 aa10.67□□□□□ -0.7
LDB2-202ENST00000441778 CKAP2LQ8IYA6 745 aa10.67□□□□□ -0.7
LDB2-202ENST00000441778 C16orf45Q96MC5 204 aaPredicted RBP10.67□□□□□ -0.7
LDB2-202ENST00000441778 TM6SF1Q9BZW5 370 aa10.67□□□□□ -0.7
LDB2-202ENST00000441778 CYP46A1Q9Y6A2 500 aa10.67□□□□□ -0.7
LDB2-202ENST00000441778 PIK3C2AO00443 1686 aa10.67□□□□□ -0.7
LDB2-202ENST00000441778 KRT85P78386 507 aa10.67□□□□□ -0.7
LDB2-202ENST00000441778 ELP1O95163 1332 aa10.67□□□□□ -0.7
LDB2-202ENST00000441778 TTC41PQ6P2S7 1318 aa10.67□□□□□ -0.7
LDB2-202ENST00000441778 GLRX3O76003 335 aaKnown RBP10.66□□□□□ -0.7
LDB2-202ENST00000441778 KIF20AO95235 890 aa10.66□□□□□ -0.7
LDB2-202ENST00000441778 NECTIN1Q15223 517 aa10.66□□□□□ -0.7
LDB2-202ENST00000441778 LARP1BQ659C4 914 aaKnown RBP10.66□□□□□ -0.7
LDB2-202ENST00000441778 PLA2G4DQ86XP0 818 aa10.66□□□□□ -0.7
LDB2-202ENST00000441778 DACT1Q9NYF0 836 aa10.66□□□□□ -0.7
LDB2-202ENST00000441778 IGSF3O75054 1194 aa10.66□□□□□ -0.7
LDB2-202ENST00000441778 TNMDQ9H2S6 317 aa10.66□□□□□ -0.7
LDB2-202ENST00000441778 CCDC171Q6TFL3 1326 aa10.66□□□□□ -0.7
LDB2-202ENST00000441778 MARF1Q9Y4F3 1742 aaKnown RBP10.65□□□□□ -0.7
LDB2-202ENST00000441778 AMPHP49418 695 aa10.65□□□□□ -0.7
LDB2-202ENST00000441778 ZNF75DP51815 510 aa10.65□□□□□ -0.7
LDB2-202ENST00000441778 MLECQ14165 292 aa10.65□□□□□ -0.7
LDB2-202ENST00000441778 NAA30Q147X3 362 aaPredicted RBP10.65□□□□□ -0.7
LDB2-202ENST00000441778 TAF7Q15545 349 aaPredicted RBP10.65□□□□□ -0.7
LDB2-202ENST00000441778 ZSCAN25Q6NSZ9 544 aa10.65□□□□□ -0.7
LDB2-202ENST00000441778 RUFY2Q8WXA3 655 aa10.65□□□□□ -0.7
LDB2-202ENST00000441778 SMTNL1A8MU46 457 aa10.65□□□□□ -0.7
LDB2-202ENST00000441778 BEND3Q5T5X7 828 aa10.65□□□□□ -0.7
LDB2-202ENST00000441778 CREB3L3Q68CJ9 461 aa10.65□□□□□ -0.7
LDB2-202ENST00000441778 RBM43Q6ZSC3 357 aaKnown RBP10.65□□□□□ -0.7
LDB2-202ENST00000441778 PPP6R1Q9UPN7 881 aa10.65□□□□□ -0.7
LDB2-202ENST00000441778 RBM8AQ9Y5S9 174 aaKnown RBP10.65□□□□□ -0.7
LDB2-202ENST00000441778 ADAMTS13Q76LX8 1427 aa10.65□□□□□ -0.7
LDB2-202ENST00000441778 OS9Q13438 667 aaPredicted RBP10.64□□□□□ -0.71
LDB2-202ENST00000441778 SYCP1Q15431 976 aa10.64□□□□□ -0.71
LDB2-202ENST00000441778 DRC7Q8IY82 874 aa10.64□□□□□ -0.71
LDB2-202ENST00000441778 TDRD7Q8NHU6 1098 aaKnown RBP10.64□□□□□ -0.71
LDB2-202ENST00000441778 TCEANC2Q96MN5 208 aa10.64□□□□□ -0.71
LDB2-202ENST00000441778 FEZ1Q99689 392 aa10.64□□□□□ -0.71
LDB2-202ENST00000441778 CTNNA3Q9UI47 895 aa10.64□□□□□ -0.71
LDB2-202ENST00000441778 KDM3BQ7LBC6 1761 aa10.64□□□□□ -0.71
LDB2-202ENST00000441778 UBR1Q8IWV7 1749 aa10.64□□□□□ -0.71
LDB2-202ENST00000441778 ADGRL3Q9HAR2 1447 aa10.64□□□□□ -0.71
LDB2-202ENST00000441778 TNNT1P13805 278 aa10.64□□□□□ -0.71
LDB2-202ENST00000441778 CCDC144BQ3MJ40 725 aa10.64□□□□□ -0.71
LDB2-202ENST00000441778 CCDC144CPQ8IYA2 1237 aa10.64□□□□□ -0.71
LDB2-202ENST00000441778 CACTINQ8WUQ7 758 aaKnown RBP10.64□□□□□ -0.71
LDB2-202ENST00000441778 FAM227BQ96M60 508 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms