RNA–Protein interactions for RNA: ENST00000441744.1

HMGN1P32-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 32, humanhuman

BASIC

Gene HMGN1P32, Length 256 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P32-201ENST00000441744 SLC34A2O95436 690 aa9.52□□□□□ -0.89
HMGN1P32-201ENST00000441744 MAMSTRQ6ZN01 415 aa9.52□□□□□ -0.89
HMGN1P32-201ENST00000441744 DNAJC5GQ8N7S2 189 aa9.52□□□□□ -0.89
HMGN1P32-201ENST00000441744 POLR3GLQ9BT43 218 aa9.52□□□□□ -0.89
HMGN1P32-201ENST00000441744 SCUBE2Q9NQ36 999 aa9.52□□□□□ -0.89
HMGN1P32-201ENST00000441744 CNTNAP4Q9C0A0 1308 aa9.52□□□□□ -0.89
HMGN1P32-201ENST00000441744 PTCD1O75127 700 aaKnown RBP9.51□□□□□ -0.89
HMGN1P32-201ENST00000441744 PRELPP51888 382 aa9.51□□□□□ -0.89
HMGN1P32-201ENST00000441744 SLAIN1Q8ND83 568 aa9.51□□□□□ -0.89
HMGN1P32-201ENST00000441744 RTCBQ9Y3I0 505 aaKnown RBP9.51□□□□□ -0.89
HMGN1P32-201ENST00000441744 KCPQ6ZWJ8 1503 aa9.51□□□□□ -0.89
HMGN1P32-201ENST00000441744 RPS6KA4O75676 772 aa9.5□□□□□ -0.89
HMGN1P32-201ENST00000441744 CHRNA5P30532 468 aa9.5□□□□□ -0.89
HMGN1P32-201ENST00000441744 CRKLP46109 303 aaKnown RBP9.5□□□□□ -0.89
HMGN1P32-201ENST00000441744 CDCA8Q53HL2 280 aa9.5□□□□□ -0.89
HMGN1P32-201ENST00000441744 TRAPPC3LQ5T215 181 aa9.5□□□□□ -0.89
HMGN1P32-201ENST00000441744 ZNF530Q6P9A1 599 aaPredicted RBP9.5□□□□□ -0.89
HMGN1P32-201ENST00000441744 PTCD2Q8WV60 388 aaKnown RBP9.5□□□□□ -0.89
HMGN1P32-201ENST00000441744 SPDYE16A6NNV3 312 aaPredicted RBP9.49□□□□□ -0.89
HMGN1P32-201ENST00000441744 ERVV-2B6SEH9 535 aa9.49□□□□□ -0.89
HMGN1P32-201ENST00000441744 HSPA5P11021 654 aaKnown RBP9.49□□□□□ -0.89
HMGN1P32-201ENST00000441744 TGFB2P61812 414 aa9.49□□□□□ -0.89
HMGN1P32-201ENST00000441744 RC3H1Q5TC82 1133 aaKnown RBP9.49□□□□□ -0.89
HMGN1P32-201ENST00000441744 INTS5Q6P9B9 1019 aaKnown RBP9.49□□□□□ -0.89
HMGN1P32-201ENST00000441744 ARHGAP27Q6ZUM4 889 aa9.49□□□□□ -0.89
HMGN1P32-201ENST00000441744 NFATC2IPQ8NCF5 419 aa9.49□□□□□ -0.89
HMGN1P32-201ENST00000441744 DCAF5Q96JK2 942 aa9.49□□□□□ -0.89
HMGN1P32-201ENST00000441744 PANK3Q9H999 370 aa9.49□□□□□ -0.89
HMGN1P32-201ENST00000441744 FCHSD2O94868 740 aa9.48□□□□□ -0.89
HMGN1P32-201ENST00000441744 C9orf131Q5VYM1 1079 aa9.48□□□□□ -0.89
HMGN1P32-201ENST00000441744 LGR6Q9HBX8 967 aa9.48□□□□□ -0.89
HMGN1P32-201ENST00000441744 USP42Q9H9J4 1324 aaKnown RBP9.48□□□□□ -0.89
HMGN1P32-201ENST00000441744 POLRMTO00411 1230 aaKnown RBP9.47□□□□□ -0.89
HMGN1P32-201ENST00000441744 HOXB3P14651 431 aaPredicted RBP9.47□□□□□ -0.89
HMGN1P32-201ENST00000441744 IL13P35225 146 aa9.47□□□□□ -0.89
HMGN1P32-201ENST00000441744 RFC4P35249 363 aa9.47□□□□□ -0.89
HMGN1P32-201ENST00000441744 MLLT3P42568 568 aaPredicted RBP9.47□□□□□ -0.89
HMGN1P32-201ENST00000441744 CABP4P57796 275 aa9.47□□□□□ -0.89
HMGN1P32-201ENST00000441744 MAP3K9P80192 1104 aa9.47□□□□□ -0.89
HMGN1P32-201ENST00000441744 RASSF7Q02833 373 aa9.47□□□□□ -0.89
HMGN1P32-201ENST00000441744 SLC39A6Q13433 755 aa9.47□□□□□ -0.89
HMGN1P32-201ENST00000441744 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.47□□□□□ -0.89
HMGN1P32-201ENST00000441744 DNAJC10Q8IXB1 793 aa9.47□□□□□ -0.89
HMGN1P32-201ENST00000441744 NLGN1Q8N2Q7 840 aa9.47□□□□□ -0.89
HMGN1P32-201ENST00000441744 OTUD5Q96G74 571 aa9.47□□□□□ -0.89
HMGN1P32-201ENST00000441744 BCL2L12Q9HB09 334 aa9.47□□□□□ -0.89
HMGN1P32-201ENST00000441744 CARMIL3Q8ND23 1372 aa9.47□□□□□ -0.89
HMGN1P32-201ENST00000441744 WDR90Q96KV7 1748 aa9.46□□□□□ -0.89
HMGN1P32-201ENST00000441744 PRKCSHP14314 528 aaPredicted RBP9.46□□□□□ -0.9
HMGN1P32-201ENST00000441744 TM4SF1P30408 202 aa9.46□□□□□ -0.9
HMGN1P32-201ENST00000441744 TRIM26Q12899 539 aaPredicted RBP9.46□□□□□ -0.9
HMGN1P32-201ENST00000441744 PLEKHO1Q53GL0 409 aaPredicted RBP9.46□□□□□ -0.9
HMGN1P32-201ENST00000441744 SULT6B1Q6IMI4 303 aa9.46□□□□□ -0.9
HMGN1P32-201ENST00000441744 CCDC87Q9NVE4 849 aa9.46□□□□□ -0.9
HMGN1P32-201ENST00000441744 ARFGEF1Q9Y6D6 1849 aa9.46□□□□□ -0.9
HMGN1P32-201ENST00000441744 PLEKHG2Q9H7P9 1386 aa9.46□□□□□ -0.9
HMGN1P32-201ENST00000441744 MRC1P22897 1456 aa9.46□□□□□ -0.9
HMGN1P32-201ENST00000441744 SCN11AQ9UI33 1791 aa9.45□□□□□ -0.9
HMGN1P32-201ENST00000441744 TOMM70O94826 608 aa9.45□□□□□ -0.9
HMGN1P32-201ENST00000441744 MTHFSP49914 203 aa9.45□□□□□ -0.9
HMGN1P32-201ENST00000441744 TPRNQ4KMQ1 711 aa9.45□□□□□ -0.9
HMGN1P32-201ENST00000441744 USPL1Q5W0Q7 1092 aa9.45□□□□□ -0.9
HMGN1P32-201ENST00000441744 LHX8Q68G74 356 aa9.45□□□□□ -0.9
HMGN1P32-201ENST00000441744 PARP3Q9Y6F1 533 aa9.45□□□□□ -0.9
HMGN1P32-201ENST00000441744 SOS1Q07889 1333 aaPredicted RBP9.45□□□□□ -0.9
HMGN1P32-201ENST00000441744 APLP1P51693 650 aa9.44□□□□□ -0.9
HMGN1P32-201ENST00000441744 RNF181Q9P0P0 153 aa9.44□□□□□ -0.9
HMGN1P32-201ENST00000441744 ZBTB1Q9Y2K1 713 aa9.44□□□□□ -0.9
HMGN1P32-201ENST00000441744 PCDHGA4Q9Y5G9 962 aa9.44□□□□□ -0.9
HMGN1P32-201ENST00000441744 NRXN2Q9P2S2 1712 aa9.44□□□□□ -0.9
HMGN1P32-201ENST00000441744 AFDNP55196 1824 aaKnown RBP9.43□□□□□ -0.9
HMGN1P32-201ENST00000441744 HSP90AB1P08238 724 aaKnown RBP9.43□□□□□ -0.9
HMGN1P32-201ENST00000441744 HMOX1P09601 288 aa9.43□□□□□ -0.9
HMGN1P32-201ENST00000441744 CYP19A1P11511 503 aaPredicted RBP9.43□□□□□ -0.9
HMGN1P32-201ENST00000441744 NFIXQ14938 502 aa9.43□□□□□ -0.9
HMGN1P32-201ENST00000441744 AMOTQ4VCS5 1084 aa9.43□□□□□ -0.9
HMGN1P32-201ENST00000441744 COL13A1Q5TAT6 717 aaPredicted RBP9.43□□□□□ -0.9
HMGN1P32-201ENST00000441744 MORC1Q86VD1 984 aa9.43□□□□□ -0.9
HMGN1P32-201ENST00000441744 RRAGCQ9HB90 399 aa9.43□□□□□ -0.9
HMGN1P32-201ENST00000441744 PIM2Q9P1W9 311 aa9.43□□□□□ -0.9
HMGN1P32-201ENST00000441744 SBF1O95248 1867 aa9.42□□□□□ -0.9
HMGN1P32-201ENST00000441744 COL15A1P39059 1388 aa9.42□□□□□ -0.9
HMGN1P32-201ENST00000441744 RNMTO43148 476 aaKnown RBP9.42□□□□□ -0.9
HMGN1P32-201ENST00000441744 EVI5O60447 810 aa9.42□□□□□ -0.9
HMGN1P32-201ENST00000441744 HMGB2P26583 209 aaKnown RBP9.42□□□□□ -0.9
HMGN1P32-201ENST00000441744 DALRD3Q5D0E6 543 aaKnown RBP9.42□□□□□ -0.9
HMGN1P32-201ENST00000441744 C1orf141Q5JVX7 400 aa9.42□□□□□ -0.9
HMGN1P32-201ENST00000441744 PCGF6Q9BYE7 350 aa9.42□□□□□ -0.9
HMGN1P32-201ENST00000441744 SLC52A2Q9HAB3 445 aa9.42□□□□□ -0.9
HMGN1P32-201ENST00000441744 POTECB2RU33 542 aa9.41□□□□□ -0.9
HMGN1P32-201ENST00000441744 NFKBIEO00221 500 aa9.41□□□□□ -0.9
HMGN1P32-201ENST00000441744 EIF4G2P78344 907 aaKnown RBP eCLIP9.41□□□□□ -0.9
HMGN1P32-201ENST00000441744 MTHFSDQ2M296 383 aaKnown RBP9.41□□□□□ -0.9
HMGN1P32-201ENST00000441744 CCDC24Q8N4L8 307 aa9.41□□□□□ -0.9
HMGN1P32-201ENST00000441744 RBM46Q8TBY0 533 aaKnown RBP9.41□□□□□ -0.9
HMGN1P32-201ENST00000441744 COL11A2P13942 1736 aaPredicted RBP9.41□□□□□ -0.9
HMGN1P32-201ENST00000441744 COL3A1P02461 1466 aaPredicted RBP9.4□□□□□ -0.9
HMGN1P32-201ENST00000441744 UBR2Q8IWV8 1755 aa9.4□□□□□ -0.9
HMGN1P32-201ENST00000441744 DLEC1Q9Y238 1755 aa9.4□□□□□ -0.9
HMGN1P32-201ENST00000441744 TBC1D12O60347 775 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms