RNA–Protein interactions for RNA: ENST00000440125.5

STRC-203, Transcript of stereocilin, humanhuman

TSL 1 (best)

Gene STRC, Length 4,291 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-203ENST00000440125 CCDC158Q5M9N0 1113 aa13.23□□□□□ -0.29
STRC-203ENST00000440125 DACT1Q9NYF0 836 aa13.23□□□□□ -0.29
STRC-203ENST00000440125 PA2G4Q9UQ80 394 aaKnown RBP13.23□□□□□ -0.29
STRC-203ENST00000440125 YTHDC2Q9H6S0 1430 aaKnown RBP13.23□□□□□ -0.29
STRC-203ENST00000440125 BRPF1P55201 1214 aaPredicted RBP13.23□□□□□ -0.29
STRC-203ENST00000440125 TTC39AQ5SRH9 613 aa13.23□□□□□ -0.29
STRC-203ENST00000440125 ANKRD20A12PQ8NF67 263 aa13.23□□□□□ -0.29
STRC-203ENST00000440125 LRRIQ1Q96JM4 1722 aa13.23□□□□□ -0.29
STRC-203ENST00000440125 SBNO2Q9Y2G9 1366 aa13.22□□□□□ -0.29
STRC-203ENST00000440125 LARP1Q6PKG0 1096 aaKnown RBP13.22□□□□□ -0.29
STRC-203ENST00000440125 PCMTD1Q96MG8 357 aaPredicted RBP13.22□□□□□ -0.29
STRC-203ENST00000440125 CHL1O00533 1208 aa13.22□□□□□ -0.29
STRC-203ENST00000440125 KCNA6P17658 529 aa13.22□□□□□ -0.29
STRC-203ENST00000440125 SYNMO15061 1565 aa13.22□□□□□ -0.29
STRC-203ENST00000440125 GADD45BO75293 160 aaPredicted RBP13.22□□□□□ -0.29
STRC-203ENST00000440125 LRRC2Q9BYS8 371 aa13.22□□□□□ -0.29
STRC-203ENST00000440125 ABCC4O15439 1325 aa13.22□□□□□ -0.29
STRC-203ENST00000440125 PNMA6EA0A0J9YXQ4 647 aa13.22□□□□□ -0.29
STRC-203ENST00000440125 C17orf53Q8N3J3 647 aaPredicted RBP13.22□□□□□ -0.29
STRC-203ENST00000440125 JMYQ8N9B5 988 aa13.22□□□□□ -0.29
STRC-203ENST00000440125 PHAXQ9H814 394 aaKnown RBP13.22□□□□□ -0.29
STRC-203ENST00000440125 CEP126Q9P2H0 1117 aa13.22□□□□□ -0.29
STRC-203ENST00000440125 IPO7O95373 1038 aaKnown RBP13.21□□□□□ -0.29
STRC-203ENST00000440125 ANO6Q4KMQ2 910 aa13.21□□□□□ -0.29
STRC-203ENST00000440125 ANO10Q9NW15 660 aa13.21□□□□□ -0.29
STRC-203ENST00000440125 CCDC66A2RUB6 948 aa13.21□□□□□ -0.29
STRC-203ENST00000440125 CABP4P57796 275 aa13.21□□□□□ -0.29
STRC-203ENST00000440125 NUTM2BA6NNL0 878 aaPredicted RBP13.21□□□□□ -0.3
STRC-203ENST00000440125 NUTM2EB1AL46 878 aaPredicted RBP13.21□□□□□ -0.3
STRC-203ENST00000440125 NUTM2AQ8IVF1 878 aaPredicted RBP13.21□□□□□ -0.3
STRC-203ENST00000440125 FSIP1Q8NA03 581 aa13.21□□□□□ -0.3
STRC-203ENST00000440125 FAM200AQ8TCP9 573 aa13.21□□□□□ -0.3
STRC-203ENST00000440125 EYA1Q99502 592 aa13.21□□□□□ -0.3
STRC-203ENST00000440125 UGGT1Q9NYU2 1555 aa13.2□□□□□ -0.3
STRC-203ENST00000440125 BIN1O00499 593 aa13.2□□□□□ -0.3
STRC-203ENST00000440125 SFPQP23246 707 aaKnown RBP eCLIP13.2□□□□□ -0.3
STRC-203ENST00000440125 KIF18AQ8NI77 898 aa13.2□□□□□ -0.3
STRC-203ENST00000440125 ERICH4A6NGS2 130 aa13.2□□□□□ -0.3
STRC-203ENST00000440125 CFAP100Q494V2 611 aa13.2□□□□□ -0.3
STRC-203ENST00000440125 TBC1D2BQ9UPU7 963 aa13.2□□□□□ -0.3
STRC-203ENST00000440125 SOS1Q07889 1333 aaPredicted RBP13.2□□□□□ -0.3
STRC-203ENST00000440125 NOC3LQ8WTT2 800 aaKnown RBP13.19□□□□□ -0.3
STRC-203ENST00000440125 BRF1Q92994 677 aa13.19□□□□□ -0.3
STRC-203ENST00000440125 PPP1R9BQ96SB3 815 aa13.19□□□□□ -0.3
STRC-203ENST00000440125 FAM173BQ6P4H8 233 aa13.19□□□□□ -0.3
STRC-203ENST00000440125 NEK1Q96PY6 1258 aa13.19□□□□□ -0.3
STRC-203ENST00000440125 U3KPZ7 1027 aaPredicted RBP13.19□□□□□ -0.3
STRC-203ENST00000440125 CCP110O43303 1012 aa13.19□□□□□ -0.3
STRC-203ENST00000440125 CCDC57Q2TAC2 916 aa13.19□□□□□ -0.3
STRC-203ENST00000440125 SIRT2Q8IXJ6 389 aa13.19□□□□□ -0.3
STRC-203ENST00000440125 DNAJC25Q9H1X3 360 aa13.19□□□□□ -0.3
STRC-203ENST00000440125 UBXN4Q92575 508 aa13.19□□□□□ -0.3
STRC-203ENST00000440125 PALD1Q9ULE6 856 aa13.19□□□□□ -0.3
STRC-203ENST00000440125 GPT2Q8TD30 523 aa13.18□□□□□ -0.3
STRC-203ENST00000440125 CNNM1Q9NRU3 951 aa13.18□□□□□ -0.3
STRC-203ENST00000440125 CTNNA3Q9UI47 895 aa13.18□□□□□ -0.3
STRC-203ENST00000440125 MAP3K19Q56UN5 1328 aa13.18□□□□□ -0.3
STRC-203ENST00000440125 PTGS1P23219 599 aa13.18□□□□□ -0.3
STRC-203ENST00000440125 TYRO3Q06418 890 aa13.18□□□□□ -0.3
STRC-203ENST00000440125 HSP90B2PQ58FF3 399 aa13.18□□□□□ -0.3
STRC-203ENST00000440125 CCAR1Q8IX12 1150 aaKnown RBP13.18□□□□□ -0.3
STRC-203ENST00000440125 HYPKQ9NX55 129 aa13.18□□□□□ -0.3
STRC-203ENST00000440125 PHF8Q9UPP1 1060 aa13.18□□□□□ -0.3
STRC-203ENST00000440125 ATP5J2-PTCD1G3V325 749 aa13.18□□□□□ -0.3
STRC-203ENST00000440125 MARCH6O60337 910 aa13.18□□□□□ -0.3
STRC-203ENST00000440125 PTCD1O75127 700 aaKnown RBP13.18□□□□□ -0.3
STRC-203ENST00000440125 C8orf76Q96K31 380 aa13.18□□□□□ -0.3
STRC-203ENST00000440125 CDC42BPBQ9Y5S2 1711 aa13.18□□□□□ -0.3
STRC-203ENST00000440125 TRPM1Q7Z4N2 1603 aa13.17□□□□□ -0.3
STRC-203ENST00000440125 A0A087WZG4 1122 aa13.17□□□□□ -0.3
STRC-203ENST00000440125 BRD1O95696 1058 aa13.17□□□□□ -0.3
STRC-203ENST00000440125 ISM2Q6H9L7 571 aa13.17□□□□□ -0.3
STRC-203ENST00000440125 LUZP1Q86V48 1076 aa13.17□□□□□ -0.3
STRC-203ENST00000440125 VPS37DQ86XT2 251 aa13.17□□□□□ -0.3
STRC-203ENST00000440125 CFAP74Q9C0B2 1584 aa13.17□□□□□ -0.3
STRC-203ENST00000440125 IFIT1P09914 478 aaKnown RBP13.17□□□□□ -0.3
STRC-203ENST00000440125 DDX46Q7L014 1031 aaKnown RBP13.17□□□□□ -0.3
STRC-203ENST00000440125 UBE3BQ7Z3V4 1068 aa13.17□□□□□ -0.3
STRC-203ENST00000440125 RAB11FIP4Q86YS3 637 aa13.17□□□□□ -0.3
STRC-203ENST00000440125 KCNH5Q8NCM2 988 aa13.17□□□□□ -0.3
STRC-203ENST00000440125 HECW2Q9P2P5 1572 aa13.17□□□□□ -0.3
STRC-203ENST00000440125 GOLIM4O00461 696 aa13.17□□□□□ -0.3
STRC-203ENST00000440125 NMIQ13287 307 aaPredicted RBP13.17□□□□□ -0.3
STRC-203ENST00000440125 SART3Q15020 963 aaKnown RBP13.17□□□□□ -0.3
STRC-203ENST00000440125 CTAGE5O15320 804 aa13.16□□□□□ -0.3
STRC-203ENST00000440125 CWF19L2Q2TBE0 894 aaKnown RBP13.16□□□□□ -0.3
STRC-203ENST00000440125 ABCA9Q8IUA7 1624 aa13.16□□□□□ -0.3
STRC-203ENST00000440125 SMTNL1A8MU46 457 aa13.16□□□□□ -0.3
STRC-203ENST00000440125 IGSF3O75054 1194 aa13.16□□□□□ -0.3
STRC-203ENST00000440125 POLR3DP05423 398 aaPredicted RBP13.16□□□□□ -0.3
STRC-203ENST00000440125 IMMTQ16891 758 aaKnown RBP13.16□□□□□ -0.3
STRC-203ENST00000440125 AMOTQ4VCS5 1084 aa13.16□□□□□ -0.3
STRC-203ENST00000440125 TSC1Q92574 1164 aa13.16□□□□□ -0.3
STRC-203ENST00000440125 STRN4Q9NRL3 753 aa13.16□□□□□ -0.3
STRC-203ENST00000440125 MTMR7Q9Y216 660 aa13.16□□□□□ -0.3
STRC-203ENST00000440125 SNX14Q9Y5W7 946 aa13.16□□□□□ -0.3
STRC-203ENST00000440125 URI1O94763 535 aaPredicted RBP13.16□□□□□ -0.3
STRC-203ENST00000440125 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.16□□□□□ -0.3
STRC-203ENST00000440125 RTL1A6NKG5 1358 aa13.16□□□□□ -0.3
STRC-203ENST00000440125 STX1AQ16623 288 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms