RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 PALLDQ8WX93 1383 aa12.43□□□□□ -0.42
CUBN-204ENST00000438254 LY75O60449 1722 aa12.42□□□□□ -0.42
CUBN-204ENST00000438254 RREB1Q92766 1687 aa12.42□□□□□ -0.42
CUBN-204ENST00000438254 SNPHO15079 494 aa12.42□□□□□ -0.42
CUBN-204ENST00000438254 PTCD1O75127 700 aaKnown RBP12.42□□□□□ -0.42
CUBN-204ENST00000438254 PYGBP11216 843 aa12.42□□□□□ -0.42
CUBN-204ENST00000438254 TRIM27P14373 513 aa12.42□□□□□ -0.42
CUBN-204ENST00000438254 PDE3AQ14432 1141 aa12.42□□□□□ -0.42
CUBN-204ENST00000438254 G2E3Q7L622 706 aa12.42□□□□□ -0.42
CUBN-204ENST00000438254 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.42□□□□□ -0.42
CUBN-204ENST00000438254 TMEM121BQ9BXQ6 578 aaPredicted RBP12.42□□□□□ -0.42
CUBN-204ENST00000438254 CHMP4AQ9BY43 222 aa12.42□□□□□ -0.42
CUBN-204ENST00000438254 TNNQ9UQP3 1299 aa12.42□□□□□ -0.42
CUBN-204ENST00000438254 ERBB4Q15303 1308 aa12.41□□□□□ -0.42
CUBN-204ENST00000438254 RLBP1P12271 317 aa12.41□□□□□ -0.42
CUBN-204ENST00000438254 COL5A3P25940 1745 aaPredicted RBP12.41□□□□□ -0.42
CUBN-204ENST00000438254 PROSER3Q2NL68 480 aa12.41□□□□□ -0.42
CUBN-204ENST00000438254 ZKSCAN2Q63HK3 967 aa12.41□□□□□ -0.42
CUBN-204ENST00000438254 ATF7IPQ6VMQ6 1270 aa12.41□□□□□ -0.42
CUBN-204ENST00000438254 SMARCC1Q92922 1105 aaPredicted RBP12.41□□□□□ -0.42
CUBN-204ENST00000438254 BCL11BQ9C0K0 894 aaPredicted RBP12.41□□□□□ -0.42
CUBN-204ENST00000438254 DDX21Q9NR30 783 aaKnown RBP eCLIP12.41□□□□□ -0.42
CUBN-204ENST00000438254 CHPF2Q9P2E5 772 aa12.41□□□□□ -0.42
CUBN-204ENST00000438254 DBF4Q9UBU7 674 aaPredicted RBP12.41□□□□□ -0.42
CUBN-204ENST00000438254 ABCC4O15439 1325 aa12.4□□□□□ -0.42
CUBN-204ENST00000438254 PTPRCP08575 1304 aa12.4□□□□□ -0.42
CUBN-204ENST00000438254 EP400Q96L91 3159 aa12.4□□□□□ -0.42
CUBN-204ENST00000438254 EIF2S2P20042 333 aaKnown RBP12.4□□□□□ -0.42
CUBN-204ENST00000438254 DNAJC10Q8IXB1 793 aa12.4□□□□□ -0.42
CUBN-204ENST00000438254 NECTIN2Q92692 538 aa12.4□□□□□ -0.42
CUBN-204ENST00000438254 STK31Q9BXU1 1019 aa12.4□□□□□ -0.42
CUBN-204ENST00000438254 TEX13AQ9BXU3 409 aaPredicted RBP12.4□□□□□ -0.42
CUBN-204ENST00000438254 LOC102724428A0A0B4J2F2 783 aa12.39□□□□□ -0.43
CUBN-204ENST00000438254 NBPF26B4DH59 902 aa12.39□□□□□ -0.43
CUBN-204ENST00000438254 SIK1P57059 783 aa12.39□□□□□ -0.43
CUBN-204ENST00000438254 FLIIQ13045 1269 aa12.39□□□□□ -0.43
CUBN-204ENST00000438254 NBPF14Q5TI25 921 aa12.39□□□□□ -0.43
CUBN-204ENST00000438254 NBPF10Q6P3W6 841 aaKnown RBP12.39□□□□□ -0.43
CUBN-204ENST00000438254 NBPF15Q8N660 670 aa12.39□□□□□ -0.43
CUBN-204ENST00000438254 FRAT1Q92837 279 aaPredicted RBP12.39□□□□□ -0.43
CUBN-204ENST00000438254 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.39□□□□□ -0.43
CUBN-204ENST00000438254 TNS1Q9HBL0 1735 aaKnown RBP12.39□□□□□ -0.43
CUBN-204ENST00000438254 KAT6BQ8WYB5 2073 aa12.39□□□□□ -0.43
CUBN-204ENST00000438254 N4BP2Q86UW6 1770 aaPredicted RBP12.38□□□□□ -0.43
CUBN-204ENST00000438254 IPO8O15397 1037 aaKnown RBP12.38□□□□□ -0.43
CUBN-204ENST00000438254 ANXA1P04083 346 aa12.38□□□□□ -0.43
CUBN-204ENST00000438254 CYP19A1P11511 503 aaPredicted RBP12.38□□□□□ -0.43
CUBN-204ENST00000438254 IRX6P78412 446 aaPredicted RBP12.38□□□□□ -0.43
CUBN-204ENST00000438254 ITPK1Q13572 414 aa12.38□□□□□ -0.43
CUBN-204ENST00000438254 PHAXQ9H814 394 aaKnown RBP12.38□□□□□ -0.43
CUBN-204ENST00000438254 ERICH6BQ5W0A0 696 aa12.37□□□□□ -0.43
CUBN-204ENST00000438254 DZIP1LQ8IYY4 767 aaKnown RBP12.37□□□□□ -0.43
CUBN-204ENST00000438254 PANK1Q8TE04 598 aa12.37□□□□□ -0.43
CUBN-204ENST00000438254 API5Q9BZZ5 524 aaKnown RBP12.37□□□□□ -0.43
CUBN-204ENST00000438254 HYPKQ9NX55 129 aa12.37□□□□□ -0.43
CUBN-204ENST00000438254 GTF3C3Q9Y5Q9 886 aa12.37□□□□□ -0.43
CUBN-204ENST00000438254 PXDNLA1KZ92 1463 aa12.37□□□□□ -0.43
CUBN-204ENST00000438254 ADCY9O60503 1353 aa12.36□□□□□ -0.43
CUBN-204ENST00000438254 A1BGP04217 495 aa12.36□□□□□ -0.43
CUBN-204ENST00000438254 CRBNQ96SW2 442 aa12.36□□□□□ -0.43
CUBN-204ENST00000438254 TAF1LQ8IZX4 1826 aa12.36□□□□□ -0.43
CUBN-204ENST00000438254 MYH14Q7Z406 1995 aaKnown RBP12.36□□□□□ -0.43
CUBN-204ENST00000438254 RGPD3A6NKT7 1758 aaPredicted RBP12.35□□□□□ -0.43
CUBN-204ENST00000438254 RGPD4Q7Z3J3 1758 aa12.35□□□□□ -0.43
CUBN-204ENST00000438254 TRIM37O94972 964 aa12.35□□□□□ -0.43
CUBN-204ENST00000438254 STARD3NLO95772 234 aa12.35□□□□□ -0.43
CUBN-204ENST00000438254 NEFLP07196 543 aa12.35□□□□□ -0.43
CUBN-204ENST00000438254 MS4A1P11836 297 aa12.35□□□□□ -0.43
CUBN-204ENST00000438254 ATP6V1AP38606 617 aa12.35□□□□□ -0.43
CUBN-204ENST00000438254 INTS3Q68E01 1043 aaKnown RBP12.35□□□□□ -0.43
CUBN-204ENST00000438254 INTS5Q6P9B9 1019 aaKnown RBP12.35□□□□□ -0.43
CUBN-204ENST00000438254 TMEM57Q8N5G2 664 aa12.35□□□□□ -0.43
CUBN-204ENST00000438254 EXOC6Q8TAG9 804 aa12.35□□□□□ -0.43
CUBN-204ENST00000438254 CLUAP1Q96AJ1 413 aa12.35□□□□□ -0.43
CUBN-204ENST00000438254 PCDHB8Q9UN66 801 aa12.35□□□□□ -0.43
CUBN-204ENST00000438254 IBTKQ9P2D0 1353 aaPredicted RBP12.34□□□□□ -0.43
CUBN-204ENST00000438254 CANXP27824 592 aaKnown RBP12.34□□□□□ -0.43
CUBN-204ENST00000438254 PIP4K2AP48426 406 aaPredicted RBP12.34□□□□□ -0.43
CUBN-204ENST00000438254 MVPQ14764 893 aaKnown RBP12.34□□□□□ -0.43
CUBN-204ENST00000438254 ZNF467Q7Z7K2 595 aaPredicted RBP12.34□□□□□ -0.43
CUBN-204ENST00000438254 LINC00116Q8NCU8 138 aa12.34□□□□□ -0.43
CUBN-204ENST00000438254 ZBTB1Q9Y2K1 713 aa12.34□□□□□ -0.43
CUBN-204ENST00000438254 ATP10DQ9P241 1426 aa12.34□□□□□ -0.43
CUBN-204ENST00000438254 CNTNAP4Q9C0A0 1308 aa12.34□□□□□ -0.43
CUBN-204ENST00000438254 NUP188Q5SRE5 1749 aa12.34□□□□□ -0.43
CUBN-204ENST00000438254 PLSCR1O15162 318 aa12.33□□□□□ -0.44
CUBN-204ENST00000438254 MYL6BP14649 208 aa12.33□□□□□ -0.44
CUBN-204ENST00000438254 FKBP5Q13451 457 aaPredicted RBP12.33□□□□□ -0.44
CUBN-204ENST00000438254 GSE1Q14687 1217 aa12.33□□□□□ -0.44
CUBN-204ENST00000438254 COPS6Q7L5N1 327 aa12.33□□□□□ -0.44
CUBN-204ENST00000438254 XAGE3Q8WTP9 111 aa12.33□□□□□ -0.44
CUBN-204ENST00000438254 COG6Q9Y2V7 657 aa12.33□□□□□ -0.44
CUBN-204ENST00000438254 PI4KAP2A4QPH2 592 aa12.32□□□□□ -0.44
CUBN-204ENST00000438254 F6X3S4 739 aa12.32□□□□□ -0.44
CUBN-204ENST00000438254 IL6STP40189 918 aaPredicted RBP12.32□□□□□ -0.44
CUBN-204ENST00000438254 CRKLP46109 303 aaKnown RBP12.32□□□□□ -0.44
CUBN-204ENST00000438254 EIF5P55010 431 aaKnown RBP12.32□□□□□ -0.44
CUBN-204ENST00000438254 RC3H1Q5TC82 1133 aaKnown RBP12.32□□□□□ -0.44
CUBN-204ENST00000438254 KSR2Q6VAB6 950 aa12.32□□□□□ -0.44
CUBN-204ENST00000438254 FTSJ3Q8IY81 847 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms