RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 EPHX2P34913 555 aa17.17■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 PAXIP1Q6ZW49 1069 aaPredicted RBP17.17■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 ANKRD31Q8N7Z5 1873 aa17.17■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 HACL1Q9UJ83 578 aa17.17■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 THSD7BQ9C0I4 1608 aa17.17■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 COL11A2P13942 1736 aaPredicted RBP17.16■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 EIF4A2Q14240 407 aaKnown RBP17.16■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 ZNF530Q6P9A1 599 aaPredicted RBP17.16■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 SSUH2Q9Y2M2 353 aa17.16■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 COL15A1P39059 1388 aa17.15■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 AOC2O75106 756 aa17.15■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 CYP19A1P11511 503 aaPredicted RBP17.15■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 MTHFSP49914 203 aa17.15■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 CARD14Q9BXL6 1004 aa17.15■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 DDX21Q9NR30 783 aaKnown RBP eCLIP17.15■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 ZBTB1Q9Y2K1 713 aa17.15■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 LTBP1Q14766 1721 aa17.15■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 ANKRD26Q9UPS8 1709 aa17.15■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 SPDYE2BA6NHP3 402 aa17.14■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 SPDYE6P0CI01 402 aa17.14■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 DGKZQ13574 1117 aa17.14■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 SPDYE2Q495Y8 402 aa17.14■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 POLKQ9UBT6 870 aa17.14■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 CASP8AP2Q9UKL3 1982 aa17.14■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 RNF123Q5XPI4 1314 aa17.14■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 SLX4Q8IY92 1834 aa17.14■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 PLEKHO1Q53GL0 409 aaPredicted RBP17.13■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 SPOCK2Q92563 424 aa17.13■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 BRIP1Q9BX63 1249 aa17.13■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 PDE6BP35913 854 aa17.12■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 SOX10P56693 466 aa17.12■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 TBC1D9BQ66K14 1250 aa17.12■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 PRR5LQ6MZQ0 368 aa17.12■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 PRPF40BQ6NWY9 871 aaKnown RBP17.12■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 ECE1P42892 770 aa17.11■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 PNMA8AQ86V59 439 aaPredicted RBP17.11■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 PRPF38BQ5VTL8 546 aaKnown RBP17.1■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 CST9Q5W186 159 aa17.1■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 ZNF277Q9NRM2 450 aaPredicted RBP17.1■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 CACNA1SQ13698 1873 aa17.1■□□□□ 0.33
SMAD9-IT1-201ENST00000437983 TRAF5O00463 557 aa17.08■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 CANXP27824 592 aaKnown RBP17.08■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 SLC39A6Q13433 755 aa17.08■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 OLFM4Q6UX06 510 aa17.08■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 C7orf43Q8WVR3 580 aa17.08■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 CNKSR1Q969H4 720 aa17.08■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 PDZRN3Q9UPQ7 1066 aa17.08■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 SRGNP10124 158 aa17.07■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 MAP2K2P36507 400 aa17.07■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 C1orf141Q5JVX7 400 aa17.07■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 STYK1Q6J9G0 422 aa17.07■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 TLL2Q9Y6L7 1015 aa17.07■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 AMOTQ4VCS5 1084 aa17.06■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 SOGA3Q5TF21 947 aa17.06■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 AEBP1Q8IUX7 1158 aa17.06■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 TNNT2P45379 298 aaPredicted RBP17.05■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 FZD9O00144 591 aa17.04■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 FKBP4Q02790 459 aaKnown RBP eCLIP17.04■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 CCDC93Q567U6 631 aa17.04■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 MASTLQ96GX5 879 aa17.04■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 CA12O43570 354 aa17.03■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 EIF5P55010 431 aaKnown RBP17.03■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 LGR6Q9HBX8 967 aa17.03■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 CIAPIN1Q6FI81 312 aa17.02■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 GPC2Q8N158 579 aa17.02■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 SLC52A2Q9HAB3 445 aa17.02■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 TBC1D2BQ9UPU7 963 aa17.02■□□□□ 0.32
SMAD9-IT1-201ENST00000437983 ARFGEF2Q9Y6D5 1785 aa17.02■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 EPS15P42566 896 aa17.01■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 BRPF1P55201 1214 aaPredicted RBP17.01■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 CNBD1Q8NA66 436 aa17.01■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 ZIC5Q96T25 663 aa17.01■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 GJA3Q9Y6H8 435 aa17.01■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 SCN11AQ9UI33 1791 aa17■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 IARSP41252 1262 aaKnown RBP17■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 SAPCD2Q86UD0 394 aa17■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 TRPM7Q96QT4 1865 aa16.99■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 NPHP1O15259 732 aa16.99■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 SYNE4Q8N205 404 aa16.99■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 PLCD3Q8N3E9 789 aa16.99■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 A0A087WZG4 1122 aa16.98■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 ECM2O94769 699 aaPredicted RBP16.98■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 SCNN1DP51172 638 aa16.98■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 SETDB2Q96T68 719 aa16.98■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 ZNF330Q9Y3S2 320 aaPredicted RBP16.98■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 ST5P78524 1137 aa16.97■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 COL4A5P29400 1685 aa16.97■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 SCN7AQ01118 1682 aa16.97■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 CELF2O95319 508 aaKnown RBP16.96■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 LMOD1P29536 600 aaPredicted RBP16.96■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 VSIG10Q8N0Z9 540 aa16.96■□□□□ 0.31
SMAD9-IT1-201ENST00000437983 RNMTO43148 476 aaKnown RBP16.95■□□□□ 0.3
SMAD9-IT1-201ENST00000437983 SULT6B1Q6IMI4 303 aa16.95■□□□□ 0.3
SMAD9-IT1-201ENST00000437983 RTKN2Q8IZC4 609 aa16.95■□□□□ 0.3
SMAD9-IT1-201ENST00000437983 CAMTA2O94983 1202 aa16.94■□□□□ 0.3
SMAD9-IT1-201ENST00000437983 NPR1P16066 1061 aa16.94■□□□□ 0.3
SMAD9-IT1-201ENST00000437983 AKAP4Q5JQC9 854 aa16.94■□□□□ 0.3
SMAD9-IT1-201ENST00000437983 STARD3NLO95772 234 aa16.93■□□□□ 0.3
SMAD9-IT1-201ENST00000437983 EIF6P56537 245 aaKnown RBP16.93■□□□□ 0.3
SMAD9-IT1-201ENST00000437983 USP50Q70EL3 339 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms