RNA–Protein interactions for RNA: ENST00000437111.1

SHQ1P1-201, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor pseudogene 1, humanhuman

BASIC

Gene SHQ1P1, Length 1,544 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1P1-201ENST00000437111 ITGB4P16144 1822 aa8.03□□□□□ -1.12
SHQ1P1-201ENST00000437111 GYS1P13807 737 aa8.02□□□□□ -1.13
SHQ1P1-201ENST00000437111 VEGFAP15692 232 aaPredicted RBP8.02□□□□□ -1.13
SHQ1P1-201ENST00000437111 DALRD3Q5D0E6 543 aaKnown RBP8.02□□□□□ -1.13
SHQ1P1-201ENST00000437111 FTSJ3Q8IY81 847 aaKnown RBP8.02□□□□□ -1.13
SHQ1P1-201ENST00000437111 CLUAP1Q96AJ1 413 aa8.02□□□□□ -1.13
SHQ1P1-201ENST00000437111 IPO9Q96P70 1041 aaKnown RBP8.02□□□□□ -1.13
SHQ1P1-201ENST00000437111 TSPYL2Q9H2G4 693 aaPredicted RBP8.02□□□□□ -1.13
SHQ1P1-201ENST00000437111 C4AP0C0L4 1744 aa8.01□□□□□ -1.13
SHQ1P1-201ENST00000437111 SBF1O95248 1867 aa8.01□□□□□ -1.13
SHQ1P1-201ENST00000437111 PDE4AP27815 886 aa8.01□□□□□ -1.13
SHQ1P1-201ENST00000437111 ATP6V1AP38606 617 aa8.01□□□□□ -1.13
SHQ1P1-201ENST00000437111 TMPOP42166 694 aaKnown RBP8.01□□□□□ -1.13
SHQ1P1-201ENST00000437111 RASSF7Q02833 373 aa8.01□□□□□ -1.13
SHQ1P1-201ENST00000437111 TRAPPC3LQ5T215 181 aa8.01□□□□□ -1.13
SHQ1P1-201ENST00000437111 ZKSCAN2Q63HK3 967 aa8.01□□□□□ -1.13
SHQ1P1-201ENST00000437111 SP7Q8TDD2 431 aaPredicted RBP8.01□□□□□ -1.13
SHQ1P1-201ENST00000437111 MKRN1Q9UHC7 482 aaKnown RBP8.01□□□□□ -1.13
SHQ1P1-201ENST00000437111 ASAP1Q9ULH1 1129 aa8.01□□□□□ -1.13
SHQ1P1-201ENST00000437111 RRP7AQ9Y3A4 280 aaKnown RBP8.01□□□□□ -1.13
SHQ1P1-201ENST00000437111 PARP3Q9Y6F1 533 aa8.01□□□□□ -1.13
SHQ1P1-201ENST00000437111 RTL1A6NKG5 1358 aa8.01□□□□□ -1.13
SHQ1P1-201ENST00000437111 ZC3H4Q9UPT8 1303 aaKnown RBP8□□□□□ -1.13
SHQ1P1-201ENST00000437111 GLTPD2A6NH11 291 aa8□□□□□ -1.13
SHQ1P1-201ENST00000437111 IPO8O15397 1037 aaKnown RBP8□□□□□ -1.13
SHQ1P1-201ENST00000437111 RARSP54136 660 aaKnown RBP8□□□□□ -1.13
SHQ1P1-201ENST00000437111 RRS1Q15050 365 aaKnown RBP8□□□□□ -1.13
SHQ1P1-201ENST00000437111 NKX1-1Q15270 411 aaPredicted RBP8□□□□□ -1.13
SHQ1P1-201ENST00000437111 FRAT1Q92837 279 aaPredicted RBP8□□□□□ -1.13
SHQ1P1-201ENST00000437111 ARHGEF1Q92888 912 aaKnown RBP8□□□□□ -1.13
SHQ1P1-201ENST00000437111 BACH2Q9BYV9 841 aa8□□□□□ -1.13
SHQ1P1-201ENST00000437111 RTCBQ9Y3I0 505 aaKnown RBP8□□□□□ -1.13
SHQ1P1-201ENST00000437111 KDM6AO15550 1401 aaPredicted RBP8□□□□□ -1.13
SHQ1P1-201ENST00000437111 POTECB2RU33 542 aa7.99□□□□□ -1.13
SHQ1P1-201ENST00000437111 BCAR3O75815 825 aa7.99□□□□□ -1.13
SHQ1P1-201ENST00000437111 CHRNA5P30532 468 aa7.99□□□□□ -1.13
SHQ1P1-201ENST00000437111 C20orf194Q5TEA3 1177 aa7.99□□□□□ -1.13
SHQ1P1-201ENST00000437111 FAM212AQ96EL1 285 aa7.99□□□□□ -1.13
SHQ1P1-201ENST00000437111 DAXXQ9UER7 740 aaPredicted RBP7.99□□□□□ -1.13
SHQ1P1-201ENST00000437111 CACNA1FO60840 1977 aa7.99□□□□□ -1.13
SHQ1P1-201ENST00000437111 CTCFP49711 727 aaPredicted RBP7.98□□□□□ -1.13
SHQ1P1-201ENST00000437111 RIPK4P57078 832 aa7.98□□□□□ -1.13
SHQ1P1-201ENST00000437111 ALDH1L2Q3SY69 923 aa7.98□□□□□ -1.13
SHQ1P1-201ENST00000437111 ABHD8Q96I13 439 aa7.98□□□□□ -1.13
SHQ1P1-201ENST00000437111 PLEKHF1Q96S99 279 aa7.98□□□□□ -1.13
SHQ1P1-201ENST00000437111 ATG3Q9NT62 314 aa7.98□□□□□ -1.13
SHQ1P1-201ENST00000437111 SMC4Q9NTJ3 1288 aa7.98□□□□□ -1.13
SHQ1P1-201ENST00000437111 TMOD3Q9NYL9 352 aa7.98□□□□□ -1.13
SHQ1P1-201ENST00000437111 DDX19BQ9UMR2 479 aa7.98□□□□□ -1.13
SHQ1P1-201ENST00000437111 KDRP35968 1356 aa7.98□□□□□ -1.13
SHQ1P1-201ENST00000437111 CNTNAP1P78357 1384 aa7.98□□□□□ -1.13
SHQ1P1-201ENST00000437111 CD44P16070 742 aaKnown RBP7.98□□□□□ -1.13
SHQ1P1-201ENST00000437111 RFC4P35249 363 aa7.98□□□□□ -1.13
SHQ1P1-201ENST00000437111 GNAI1P63096 354 aa7.98□□□□□ -1.13
SHQ1P1-201ENST00000437111 HSP90AB2PQ58FF8 381 aa7.98□□□□□ -1.13
SHQ1P1-201ENST00000437111 RTL5Q5HYW3 569 aaPredicted RBP7.98□□□□□ -1.13
SHQ1P1-201ENST00000437111 SLC4A9Q96Q91 983 aa7.98□□□□□ -1.13
SHQ1P1-201ENST00000437111 RWDD1Q9H446 243 aaPredicted RBP7.98□□□□□ -1.13
SHQ1P1-201ENST00000437111 PPM1GO15355 546 aaPredicted RBP7.97□□□□□ -1.13
SHQ1P1-201ENST00000437111 RPS6KA4O75676 772 aa7.97□□□□□ -1.13
SHQ1P1-201ENST00000437111 LMNB1P20700 586 aa7.97□□□□□ -1.13
SHQ1P1-201ENST00000437111 PRKAR2BP31323 418 aa7.97□□□□□ -1.13
SHQ1P1-201ENST00000437111 LBX1P52954 281 aa7.97□□□□□ -1.13
SHQ1P1-201ENST00000437111 MLLT1Q03111 559 aaPredicted RBP7.97□□□□□ -1.13
SHQ1P1-201ENST00000437111 DDR1Q08345 913 aa7.97□□□□□ -1.13
SHQ1P1-201ENST00000437111 GSE1Q14687 1217 aa7.97□□□□□ -1.13
SHQ1P1-201ENST00000437111 MVPQ14764 893 aaKnown RBP7.97□□□□□ -1.13
SHQ1P1-201ENST00000437111 NFE2L2Q16236 605 aa7.97□□□□□ -1.13
SHQ1P1-201ENST00000437111 RC3H1Q5TC82 1133 aaKnown RBP7.97□□□□□ -1.13
SHQ1P1-201ENST00000437111 DZIP1LQ8IYY4 767 aaKnown RBP7.97□□□□□ -1.13
SHQ1P1-201ENST00000437111 RSPH6AQ9H0K4 717 aa7.97□□□□□ -1.13
SHQ1P1-201ENST00000437111 UPF2Q9HAU5 1272 aaKnown RBP7.97□□□□□ -1.13
SHQ1P1-201ENST00000437111 POLKQ9UBT6 870 aa7.97□□□□□ -1.13
SHQ1P1-201ENST00000437111 KIF24Q5T7B8 1368 aa7.96□□□□□ -1.13
SHQ1P1-201ENST00000437111 RGS19P49795 217 aa7.96□□□□□ -1.14
SHQ1P1-201ENST00000437111 NPM2Q86SE8 214 aaKnown RBP7.96□□□□□ -1.14
SHQ1P1-201ENST00000437111 AIDAQ96BJ3 306 aa7.96□□□□□ -1.14
SHQ1P1-201ENST00000437111 IFT57Q9NWB7 429 aa7.96□□□□□ -1.14
SHQ1P1-201ENST00000437111 WBP1LQ9NX94 342 aa7.96□□□□□ -1.14
SHQ1P1-201ENST00000437111 COG6Q9Y2V7 657 aa7.96□□□□□ -1.14
SHQ1P1-201ENST00000437111 CNTNAP4Q9C0A0 1308 aa7.96□□□□□ -1.14
SHQ1P1-201ENST00000437111 POTEIP0CG38 1075 aa7.95□□□□□ -1.14
SHQ1P1-201ENST00000437111 POTEJP0CG39 1038 aa7.95□□□□□ -1.14
SHQ1P1-201ENST00000437111 HSPA8P11142 646 aaKnown RBP7.95□□□□□ -1.14
SHQ1P1-201ENST00000437111 VEGFBP49765 207 aa7.95□□□□□ -1.14
SHQ1P1-201ENST00000437111 SRP68Q9UHB9 627 aaKnown RBP7.95□□□□□ -1.14
SHQ1P1-201ENST00000437111 SPG7Q9UQ90 795 aa7.95□□□□□ -1.14
SHQ1P1-201ENST00000437111 NCAPD2Q15021 1401 aa7.94□□□□□ -1.14
SHQ1P1-201ENST00000437111 POLRMTO00411 1230 aaKnown RBP7.94□□□□□ -1.14
SHQ1P1-201ENST00000437111 ECM2O94769 699 aaPredicted RBP7.94□□□□□ -1.14
SHQ1P1-201ENST00000437111 EXOSC9Q06265 439 aaKnown RBP7.94□□□□□ -1.14
SHQ1P1-201ENST00000437111 ATF7IPQ6VMQ6 1270 aa7.94□□□□□ -1.14
SHQ1P1-201ENST00000437111 PANK1Q8TE04 598 aa7.94□□□□□ -1.14
SHQ1P1-201ENST00000437111 TRIM35Q9UPQ4 493 aa7.94□□□□□ -1.14
SHQ1P1-201ENST00000437111 TIAM2Q8IVF5 1701 aa7.94□□□□□ -1.14
SHQ1P1-201ENST00000437111 FLT4P35916 1363 aa7.94□□□□□ -1.14
SHQ1P1-201ENST00000437111 COL5A3P25940 1745 aaPredicted RBP7.93□□□□□ -1.14
SHQ1P1-201ENST00000437111 CCDC85CA6NKD9 419 aa7.93□□□□□ -1.14
SHQ1P1-201ENST00000437111 NFKBIEO00221 500 aa7.93□□□□□ -1.14
SHQ1P1-201ENST00000437111 EIF5BO60841 1220 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms