RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 ABT1Q9ULW3 272 aaKnown RBP22.53■■□□□ 1.2
HMGN1P19-201ENST00000436976 SRGNP10124 158 aa22.52■■□□□ 1.2
HMGN1P19-201ENST00000436976 STYK1Q6J9G0 422 aa22.52■■□□□ 1.2
HMGN1P19-201ENST00000436976 TSKSQ9UJT2 592 aa22.52■■□□□ 1.2
HMGN1P19-201ENST00000436976 SULT6B1Q6IMI4 303 aa22.51■■□□□ 1.19
HMGN1P19-201ENST00000436976 C7orf43Q8WVR3 580 aa22.51■■□□□ 1.19
HMGN1P19-201ENST00000436976 RNF123Q5XPI4 1314 aa22.51■■□□□ 1.19
HMGN1P19-201ENST00000436976 FMR1Q06787 632 aaKnown RBP eCLIP22.5■■□□□ 1.19
HMGN1P19-201ENST00000436976 AKAP4Q5JQC9 854 aa22.5■■□□□ 1.19
HMGN1P19-201ENST00000436976 SOGA3Q5TF21 947 aa22.5■■□□□ 1.19
HMGN1P19-201ENST00000436976 VSIG10Q8N0Z9 540 aa22.5■■□□□ 1.19
HMGN1P19-201ENST00000436976 CAPNS2Q96L46 248 aa22.5■■□□□ 1.19
HMGN1P19-201ENST00000436976 DDX21Q9NR30 783 aaKnown RBP eCLIP22.49■■□□□ 1.19
HMGN1P19-201ENST00000436976 RNMTO43148 476 aaKnown RBP22.48■■□□□ 1.19
HMGN1P19-201ENST00000436976 CYP4F22Q6NT55 531 aa22.48■■□□□ 1.19
HMGN1P19-201ENST00000436976 MASTLQ96GX5 879 aa22.48■■□□□ 1.19
HMGN1P19-201ENST00000436976 ZNF277Q9NRM2 450 aaPredicted RBP22.48■■□□□ 1.19
HMGN1P19-201ENST00000436976 PNMA8AQ86V59 439 aaPredicted RBP22.47■■□□□ 1.19
HMGN1P19-201ENST00000436976 CFAP44Q96MT7 982 aa22.47■■□□□ 1.19
HMGN1P19-201ENST00000436976 MCOLN1Q9GZU1 580 aa22.47■■□□□ 1.19
HMGN1P19-201ENST00000436976 TBC1D2BQ9UPU7 963 aa22.47■■□□□ 1.19
HMGN1P19-201ENST00000436976 SIPA1L3O60292 1781 aaPredicted RBP22.46■■□□□ 1.19
HMGN1P19-201ENST00000436976 A0A087WZG4 1122 aa22.46■■□□□ 1.19
HMGN1P19-201ENST00000436976 CCDC93Q567U6 631 aa22.46■■□□□ 1.19
HMGN1P19-201ENST00000436976 OLFM4Q6UX06 510 aa22.46■■□□□ 1.19
HMGN1P19-201ENST00000436976 CNBD1Q8NA66 436 aa22.46■■□□□ 1.19
HMGN1P19-201ENST00000436976 GPR101Q96P66 508 aaPredicted RBP22.46■■□□□ 1.19
HMGN1P19-201ENST00000436976 BEGAINQ9BUH8 593 aa22.46■■□□□ 1.19
HMGN1P19-201ENST00000436976 FKBP4Q02790 459 aaKnown RBP eCLIP22.45■■□□□ 1.18
HMGN1P19-201ENST00000436976 GRM1Q13255 1194 aa22.45■■□□□ 1.18
HMGN1P19-201ENST00000436976 PAXIP1Q6ZW49 1069 aaPredicted RBP22.44■■□□□ 1.18
HMGN1P19-201ENST00000436976 COL4A5P29400 1685 aa22.43■■□□□ 1.18
HMGN1P19-201ENST00000436976 FZD9O00144 591 aa22.43■■□□□ 1.18
HMGN1P19-201ENST00000436976 ECE1P42892 770 aa22.43■■□□□ 1.18
HMGN1P19-201ENST00000436976 AOC2O75106 756 aa22.42■■□□□ 1.18
HMGN1P19-201ENST00000436976 ST5P78524 1137 aa22.42■■□□□ 1.18
HMGN1P19-201ENST00000436976 CST9Q5W186 159 aa22.42■■□□□ 1.18
HMGN1P19-201ENST00000436976 CAMTA2O94983 1202 aa22.41■■□□□ 1.18
HMGN1P19-201ENST00000436976 STARD3NLO95772 234 aa22.41■■□□□ 1.18
HMGN1P19-201ENST00000436976 IL13P35225 146 aa22.41■■□□□ 1.18
HMGN1P19-201ENST00000436976 SETDB2Q96T68 719 aa22.41■■□□□ 1.18
HMGN1P19-201ENST00000436976 ZNF330Q9Y3S2 320 aaPredicted RBP22.41■■□□□ 1.18
HMGN1P19-201ENST00000436976 GPC2Q8N158 579 aa22.4■■□□□ 1.18
HMGN1P19-201ENST00000436976 SNED1Q8TER0 1413 aa22.4■■□□□ 1.18
HMGN1P19-201ENST00000436976 NPHP1O15259 732 aa22.39■■□□□ 1.17
HMGN1P19-201ENST00000436976 IARSP41252 1262 aaKnown RBP22.39■■□□□ 1.17
HMGN1P19-201ENST00000436976 TLL2Q9Y6L7 1015 aa22.39■■□□□ 1.17
HMGN1P19-201ENST00000436976 TRAF5O00463 557 aa22.38■■□□□ 1.17
HMGN1P19-201ENST00000436976 IL6STP40189 918 aaPredicted RBP22.38■■□□□ 1.17
HMGN1P19-201ENST00000436976 ZNF496Q96IT1 587 aaPredicted RBP22.38■■□□□ 1.17
HMGN1P19-201ENST00000436976 MAP2K2P36507 400 aa22.37■■□□□ 1.17
HMGN1P19-201ENST00000436976 HEG1Q9ULI3 1381 aa22.37■■□□□ 1.17
HMGN1P19-201ENST00000436976 NPR1P16066 1061 aa22.36■■□□□ 1.17
HMGN1P19-201ENST00000436976 DGKZQ13574 1117 aa22.36■■□□□ 1.17
HMGN1P19-201ENST00000436976 SYNE4Q8N205 404 aa22.36■■□□□ 1.17
HMGN1P19-201ENST00000436976 KLRG2A4D1S0 409 aaPredicted RBP22.35■■□□□ 1.17
HMGN1P19-201ENST00000436976 A1BGP04217 495 aa22.35■■□□□ 1.17
HMGN1P19-201ENST00000436976 EPS15P42566 896 aa22.35■■□□□ 1.17
HMGN1P19-201ENST00000436976 MTHFSDQ2M296 383 aaKnown RBP22.35■■□□□ 1.17
HMGN1P19-201ENST00000436976 RTKN2Q8IZC4 609 aa22.35■■□□□ 1.17
HMGN1P19-201ENST00000436976 SCNN1DP51172 638 aa22.34■■□□□ 1.17
HMGN1P19-201ENST00000436976 TTC5Q8N0Z6 440 aa22.34■■□□□ 1.17
HMGN1P19-201ENST00000436976 GJA3Q9Y6H8 435 aa22.33■■□□□ 1.17
HMGN1P19-201ENST00000436976 CA12O43570 354 aa22.32■■□□□ 1.16
HMGN1P19-201ENST00000436976 HMOX1P09601 288 aa22.32■■□□□ 1.16
HMGN1P19-201ENST00000436976 POLR3GLQ9BT43 218 aa22.32■■□□□ 1.16
HMGN1P19-201ENST00000436976 SAPCD2Q86UD0 394 aa22.31■■□□□ 1.16
HMGN1P19-201ENST00000436976 NBPF5PQ86XG9 351 aaPredicted RBP22.31■■□□□ 1.16
HMGN1P19-201ENST00000436976 LMOD1P29536 600 aaPredicted RBP22.3■■□□□ 1.16
HMGN1P19-201ENST00000436976 ZNF790Q6PG37 636 aa22.3■■□□□ 1.16
HMGN1P19-201ENST00000436976 DZIP3Q86Y13 1208 aaKnown RBP22.3■■□□□ 1.16
HMGN1P19-201ENST00000436976 BRPF1P55201 1214 aaPredicted RBP22.29■■□□□ 1.16
HMGN1P19-201ENST00000436976 MORC1Q86VD1 984 aa22.29■■□□□ 1.16
HMGN1P19-201ENST00000436976 PSMD1Q99460 953 aa22.29■■□□□ 1.16
HMGN1P19-201ENST00000436976 TEX13AQ9BXU3 409 aaPredicted RBP22.29■■□□□ 1.16
HMGN1P19-201ENST00000436976 PANK3Q9H999 370 aa22.29■■□□□ 1.16
HMGN1P19-201ENST00000436976 EIF6P56537 245 aaKnown RBP22.28■■□□□ 1.16
HMGN1P19-201ENST00000436976 SOX10P56693 466 aa22.28■■□□□ 1.16
HMGN1P19-201ENST00000436976 JDP2Q8WYK2 163 aa22.28■■□□□ 1.16
HMGN1P19-201ENST00000436976 AKAP11Q9UKA4 1901 aa22.27■■□□□ 1.16
HMGN1P19-201ENST00000436976 PIP4K2AP48426 406 aaPredicted RBP22.27■■□□□ 1.16
HMGN1P19-201ENST00000436976 CIAPIN1Q6FI81 312 aa22.27■■□□□ 1.16
HMGN1P19-201ENST00000436976 USP50Q70EL3 339 aaPredicted RBP22.27■■□□□ 1.16
HMGN1P19-201ENST00000436976 ZIC5Q96T25 663 aa22.26■■□□□ 1.15
HMGN1P19-201ENST00000436976 POLR2AP24928 1970 aaKnown RBP22.26■■□□□ 1.15
HMGN1P19-201ENST00000436976 CELF2O95319 508 aaKnown RBP22.25■■□□□ 1.15
HMGN1P19-201ENST00000436976 PRPF38BQ5VTL8 546 aaKnown RBP22.25■■□□□ 1.15
HMGN1P19-201ENST00000436976 ALDH1B1P30837 517 aa22.24■■□□□ 1.15
HMGN1P19-201ENST00000436976 CLEC4GQ6UXB4 293 aa22.24■■□□□ 1.15
HMGN1P19-201ENST00000436976 NPM2Q86SE8 214 aaKnown RBP22.24■■□□□ 1.15
HMGN1P19-201ENST00000436976 SLC51AQ86UW1 340 aa22.24■■□□□ 1.15
HMGN1P19-201ENST00000436976 IL17REQ8NFR9 667 aa22.24■■□□□ 1.15
HMGN1P19-201ENST00000436976 HHIPL1Q96JK4 782 aa22.24■■□□□ 1.15
HMGN1P19-201ENST00000436976 NUP98P52948 1817 aa22.24■■□□□ 1.15
HMGN1P19-201ENST00000436976 KCNQ3O43525 872 aa22.22■■□□□ 1.15
HMGN1P19-201ENST00000436976 TPTE2Q6XPS3 522 aa22.22■■□□□ 1.15
HMGN1P19-201ENST00000436976 FMNL2Q96PY5 1086 aa22.22■■□□□ 1.15
HMGN1P19-201ENST00000436976 GLIS2Q9BZE0 524 aaPredicted RBP22.22■■□□□ 1.15
HMGN1P19-201ENST00000436976 FAM177BA6PVY3 158 aa22.21■■□□□ 1.15
HMGN1P19-201ENST00000436976 TEFQ10587 303 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms