RNA–Protein interactions for RNA: ENST00000436442.2

RPP21-223, Transcript of ribonuclease P/MRP subunit p21, human

TSL 1 (best) BASIC

Gene RPP21, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPP21-223	ENST00000436442	CNKSR1	Q969H4	720 aa		13.64	□□□□□ -0.23
RPP21-223	ENST00000436442	SNED1	Q8TER0	1413 aa		13.64	□□□□□ -0.23
RPP21-223	ENST00000436442	CNTROB	Q8N137	903 aa		13.63	□□□□□ -0.23
RPP21-223	ENST00000436442	HACL1	Q9UJ83	578 aa		13.63	□□□□□ -0.23
RPP21-223	ENST00000436442		A0A087WZG4	1122 aa		13.62	□□□□□ -0.23
RPP21-223	ENST00000436442	KLRG2	A4D1S0	409 aa	Predicted RBP	13.62	□□□□□ -0.23
RPP21-223	ENST00000436442	EPHX2	P34913	555 aa		13.62	□□□□□ -0.23
RPP21-223	ENST00000436442	SOGA3	Q5TF21	947 aa		13.62	□□□□□ -0.23
RPP21-223	ENST00000436442	MAP1S	Q66K74	1059 aa	Predicted RBP	13.62	□□□□□ -0.23
RPP21-223	ENST00000436442	MASTL	Q96GX5	879 aa		13.62	□□□□□ -0.23
RPP21-223	ENST00000436442	CASP8AP2	Q9UKL3	1982 aa		13.62	□□□□□ -0.23
RPP21-223	ENST00000436442	COL4A5	P29400	1685 aa		13.61	□□□□□ -0.23
RPP21-223	ENST00000436442	FZD9	O00144	591 aa		13.61	□□□□□ -0.23
RPP21-223	ENST00000436442	CAMTA2	O94983	1202 aa		13.61	□□□□□ -0.23
RPP21-223	ENST00000436442	EAPP	Q56P03	285 aa	Predicted RBP	13.61	□□□□□ -0.23
RPP21-223	ENST00000436442	TBC1D2B	Q9UPU7	963 aa		13.61	□□□□□ -0.23
RPP21-223	ENST00000436442	CCDC85C	A6NKD9	419 aa		13.6	□□□□□ -0.23
RPP21-223	ENST00000436442	IL6ST	P40189	918 aa	Predicted RBP	13.6	□□□□□ -0.23
RPP21-223	ENST00000436442	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
RPP21-223	ENST00000436442	FMR1	Q06787	632 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
RPP21-223	ENST00000436442	PNMA8A	Q86V59	439 aa	Predicted RBP	13.6	□□□□□ -0.23
RPP21-223	ENST00000436442	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
RPP21-223	ENST00000436442	RNF123	Q5XPI4	1314 aa		13.6	□□□□□ -0.23
RPP21-223	ENST00000436442	STARD3NL	O95772	234 aa		13.59	□□□□□ -0.23
RPP21-223	ENST00000436442	CCDC93	Q567U6	631 aa		13.59	□□□□□ -0.23
RPP21-223	ENST00000436442	OLFM4	Q6UX06	510 aa		13.59	□□□□□ -0.23
RPP21-223	ENST00000436442	CNBD1	Q8NA66	436 aa		13.59	□□□□□ -0.23
RPP21-223	ENST00000436442	ZNF496	Q96IT1	587 aa	Predicted RBP	13.59	□□□□□ -0.23
RPP21-223	ENST00000436442	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.59	□□□□□ -0.23
RPP21-223	ENST00000436442	HEG1	Q9ULI3	1381 aa		13.58	□□□□□ -0.23
RPP21-223	ENST00000436442	MTHFSD	Q2M296	383 aa	Known RBP	13.58	□□□□□ -0.24
RPP21-223	ENST00000436442	CST9	Q5W186	159 aa		13.58	□□□□□ -0.24
RPP21-223	ENST00000436442	CAPNS2	Q96L46	248 aa		13.58	□□□□□ -0.24
RPP21-223	ENST00000436442	SETDB2	Q96T68	719 aa		13.58	□□□□□ -0.24
RPP21-223	ENST00000436442	CLEC11A	Q9Y240	323 aa		13.58	□□□□□ -0.24
RPP21-223	ENST00000436442	GPC2	Q8N158	579 aa		13.57	□□□□□ -0.24
RPP21-223	ENST00000436442	GPR101	Q96P66	508 aa	Predicted RBP	13.57	□□□□□ -0.24
RPP21-223	ENST00000436442	NPR1	P16066	1061 aa		13.56	□□□□□ -0.24
RPP21-223	ENST00000436442	CYP4F22	Q6NT55	531 aa		13.56	□□□□□ -0.24
RPP21-223	ENST00000436442	PANK3	Q9H999	370 aa		13.56	□□□□□ -0.24
RPP21-223	ENST00000436442	ABT1	Q9ULW3	272 aa	Known RBP	13.56	□□□□□ -0.24
RPP21-223	ENST00000436442	A1BG	P04217	495 aa		13.55	□□□□□ -0.24
RPP21-223	ENST00000436442	ST5	P78524	1137 aa		13.55	□□□□□ -0.24
RPP21-223	ENST00000436442	ZNF790	Q6PG37	636 aa		13.55	□□□□□ -0.24
RPP21-223	ENST00000436442	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.55	□□□□□ -0.24
RPP21-223	ENST00000436442	MCOLN1	Q9GZU1	580 aa		13.55	□□□□□ -0.24
RPP21-223	ENST00000436442	TLL2	Q9Y6L7	1015 aa		13.55	□□□□□ -0.24
RPP21-223	ENST00000436442	MAP2K2	P36507	400 aa		13.54	□□□□□ -0.24
RPP21-223	ENST00000436442	IARS	P41252	1262 aa	Known RBP	13.54	□□□□□ -0.24
RPP21-223	ENST00000436442	ECE1	P42892	770 aa		13.54	□□□□□ -0.24
RPP21-223	ENST00000436442	SCNN1D	P51172	638 aa		13.54	□□□□□ -0.24
RPP21-223	ENST00000436442	MORC1	Q86VD1	984 aa		13.54	□□□□□ -0.24
RPP21-223	ENST00000436442	RTKN2	Q8IZC4	609 aa		13.54	□□□□□ -0.24
RPP21-223	ENST00000436442	IL17RE	Q8NFR9	667 aa		13.54	□□□□□ -0.24
RPP21-223	ENST00000436442	TSKS	Q9UJT2	592 aa		13.54	□□□□□ -0.24
RPP21-223	ENST00000436442	AOC2	O75106	756 aa		13.53	□□□□□ -0.24
RPP21-223	ENST00000436442	HMOX1	P09601	288 aa		13.53	□□□□□ -0.24
RPP21-223	ENST00000436442	CLEC4G	Q6UXB4	293 aa		13.53	□□□□□ -0.24
RPP21-223	ENST00000436442	SYNE4	Q8N205	404 aa		13.53	□□□□□ -0.24
RPP21-223	ENST00000436442	PSMD1	Q99460	953 aa		13.53	□□□□□ -0.24
RPP21-223	ENST00000436442	TRAF5	O00463	557 aa		13.52	□□□□□ -0.25
RPP21-223	ENST00000436442	EPS15	P42566	896 aa		13.52	□□□□□ -0.25
RPP21-223	ENST00000436442	TTC5	Q8N0Z6	440 aa		13.52	□□□□□ -0.25
RPP21-223	ENST00000436442	SAPCD2	Q86UD0	394 aa		13.51	□□□□□ -0.25
RPP21-223	ENST00000436442	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.51	□□□□□ -0.25
RPP21-223	ENST00000436442	DZIP3	Q86Y13	1208 aa	Known RBP	13.51	□□□□□ -0.25
RPP21-223	ENST00000436442	BEGAIN	Q9BUH8	593 aa		13.51	□□□□□ -0.25
RPP21-223	ENST00000436442	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.51	□□□□□ -0.25
RPP21-223	ENST00000436442	CEMIP	Q8WUJ3	1361 aa		13.5	□□□□□ -0.25
RPP21-223	ENST00000436442	RGL2	O15211	777 aa		13.5	□□□□□ -0.25
RPP21-223	ENST00000436442	KCNQ3	O43525	872 aa		13.5	□□□□□ -0.25
RPP21-223	ENST00000436442	CA12	O43570	354 aa		13.5	□□□□□ -0.25
RPP21-223	ENST00000436442	CRY2	Q49AN0	593 aa		13.5	□□□□□ -0.25
RPP21-223	ENST00000436442	USP50	Q70EL3	339 aa	Predicted RBP	13.5	□□□□□ -0.25
RPP21-223	ENST00000436442	HHIPL1	Q96JK4	782 aa		13.5	□□□□□ -0.25
RPP21-223	ENST00000436442	USP16	Q9Y5T5	823 aa		13.5	□□□□□ -0.25
RPP21-223	ENST00000436442	BRPF1	P55201	1214 aa	Predicted RBP	13.49	□□□□□ -0.25
RPP21-223	ENST00000436442	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.49	□□□□□ -0.25
RPP21-223	ENST00000436442	FMNL2	Q96PY5	1086 aa		13.49	□□□□□ -0.25
RPP21-223	ENST00000436442	ALDH1B1	P30837	517 aa		13.48	□□□□□ -0.25
RPP21-223	ENST00000436442	PIP4K2A	P48426	406 aa	Predicted RBP	13.48	□□□□□ -0.25
RPP21-223	ENST00000436442	SLC51A	Q86UW1	340 aa		13.48	□□□□□ -0.25
RPP21-223	ENST00000436442	PGAP2	Q9UHJ9	254 aa		13.48	□□□□□ -0.25
RPP21-223	ENST00000436442	COL3A1	P02461	1466 aa	Predicted RBP	13.48	□□□□□ -0.25
RPP21-223	ENST00000436442	PRAMEF22	A3QJZ6	481 aa		13.47	□□□□□ -0.25
RPP21-223	ENST00000436442	NBPF26	B4DH59	902 aa		13.47	□□□□□ -0.25
RPP21-223	ENST00000436442	NPHP1	O15259	732 aa		13.47	□□□□□ -0.25
RPP21-223	ENST00000436442	GRM1	Q13255	1194 aa		13.47	□□□□□ -0.25
RPP21-223	ENST00000436442	DGKZ	Q13574	1117 aa		13.47	□□□□□ -0.25
RPP21-223	ENST00000436442	NBPF10	Q6P3W6	841 aa	Known RBP	13.47	□□□□□ -0.25
RPP21-223	ENST00000436442	TPTE2	Q6XPS3	522 aa		13.47	□□□□□ -0.25
RPP21-223	ENST00000436442	NBPF15	Q8N660	670 aa		13.47	□□□□□ -0.25
RPP21-223	ENST00000436442	JDP2	Q8WYK2	163 aa		13.47	□□□□□ -0.25
RPP21-223	ENST00000436442	POLR3GL	Q9BT43	218 aa		13.47	□□□□□ -0.25
RPP21-223	ENST00000436442	GJA3	Q9Y6H8	435 aa		13.47	□□□□□ -0.25
RPP21-223	ENST00000436442	NUP98	P52948	1817 aa		13.47	□□□□□ -0.25
RPP21-223	ENST00000436442	GNAT3	A8MTJ3	354 aa		13.46	□□□□□ -0.25
RPP21-223	ENST00000436442	TEF	Q10587	303 aa		13.46	□□□□□ -0.25
RPP21-223	ENST00000436442	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.46	□□□□□ -0.25
RPP21-223	ENST00000436442	ZIC5	Q96T25	663 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms