RNA–Protein interactions for RNA: ENST00000434152.5

APOE-203, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-203ENST00000434152 NBPF15Q8N660 670 aa26.45■■□□□ 1.82
APOE-203ENST00000434152 SETDB2Q96T68 719 aa26.45■■□□□ 1.82
APOE-203ENST00000434152 NRXN2Q9P2S2 1712 aa26.45■■□□□ 1.82
APOE-203ENST00000434152 AFDNP55196 1824 aaKnown RBP26.44■■□□□ 1.82
APOE-203ENST00000434152 H0YIN7 160 aa26.44■■□□□ 1.82
APOE-203ENST00000434152 CCDC24Q8N4L8 307 aa26.44■■□□□ 1.82
APOE-203ENST00000434152 KIF3CO14782 793 aa26.43■■□□□ 1.82
APOE-203ENST00000434152 GNAI1P63096 354 aa26.43■■□□□ 1.82
APOE-203ENST00000434152 PRR5LQ6MZQ0 368 aa26.43■■□□□ 1.82
APOE-203ENST00000434152 WWC1Q8IX03 1113 aa26.43■■□□□ 1.82
APOE-203ENST00000434152 TTLL6Q8N841 843 aa26.43■■□□□ 1.82
APOE-203ENST00000434152 BRIP1Q9BX63 1249 aa26.43■■□□□ 1.82
APOE-203ENST00000434152 IL16Q14005 1332 aa26.41■■□□□ 1.82
APOE-203ENST00000434152 ARFGEF1Q9Y6D6 1849 aa26.4■■□□□ 1.82
APOE-203ENST00000434152 PDE6BP35913 854 aa26.4■■□□□ 1.82
APOE-203ENST00000434152 CLEC4GQ6UXB4 293 aa26.4■■□□□ 1.82
APOE-203ENST00000434152 ERBB4Q15303 1308 aa26.39■■□□□ 1.82
APOE-203ENST00000434152 RNF181Q9P0P0 153 aa26.39■■□□□ 1.82
APOE-203ENST00000434152 LAS1LQ9Y4W2 734 aaKnown RBP26.39■■□□□ 1.82
APOE-203ENST00000434152 HOXB7P09629 217 aa26.38■■□□□ 1.81
APOE-203ENST00000434152 ZNF622Q969S3 477 aaKnown RBP eCLIP26.38■■□□□ 1.812e-7■□□□□ 8.5
APOE-203ENST00000434152 PDZRN3Q9UPQ7 1066 aa26.38■■□□□ 1.81
APOE-203ENST00000434152 WDR63Q8IWG1 891 aa26.37■■□□□ 1.81
APOE-203ENST00000434152 CNBD1Q8NA66 436 aa26.37■■□□□ 1.81
APOE-203ENST00000434152 MBIPQ9NS73 344 aa26.37■■□□□ 1.81
APOE-203ENST00000434152 SCN7AQ01118 1682 aa26.36■■□□□ 1.81
APOE-203ENST00000434152 NPHP1O15259 732 aa26.36■■□□□ 1.81
APOE-203ENST00000434152 RASSF7Q02833 373 aa26.36■■□□□ 1.81
APOE-203ENST00000434152 NMRK2Q9NPI5 230 aa26.36■■□□□ 1.81
APOE-203ENST00000434152 RGL2O15211 777 aa26.35■■□□□ 1.81
APOE-203ENST00000434152 MIER1Q8N108 512 aa26.35■■□□□ 1.81
APOE-203ENST00000434152 ZNF652Q9Y2D9 606 aa26.35■■□□□ 1.81
APOE-203ENST00000434152 ST5P78524 1137 aa26.34■■□□□ 1.81
APOE-203ENST00000434152 BCORQ6W2J9 1755 aa26.33■■□□□ 1.81
APOE-203ENST00000434152 PRELPP51888 382 aa26.33■■□□□ 1.81
APOE-203ENST00000434152 HLFQ16534 295 aa26.33■■□□□ 1.81
APOE-203ENST00000434152 NBPF5PQ86XG9 351 aaPredicted RBP26.33■■□□□ 1.81
APOE-203ENST00000434152 NIP7Q9Y221 180 aaKnown RBP eCLIP26.32■■□□□ 1.81e-12■□□□□ 8.6
APOE-203ENST00000434152 C21orf2O43822 256 aa26.3■■□□□ 1.8
APOE-203ENST00000434152 SRGNP10124 158 aa26.3■■□□□ 1.8
APOE-203ENST00000434152 HSPA6P17066 643 aa26.3■■□□□ 1.8
APOE-203ENST00000434152 LMNB1P20700 586 aa26.3■■□□□ 1.8
APOE-203ENST00000434152 TPTE2Q6XPS3 522 aa26.3■■□□□ 1.8
APOE-203ENST00000434152 CHMP4AQ9BY43 222 aa26.3■■□□□ 1.8
APOE-203ENST00000434152 ZNF219Q9P2Y4 722 aaPredicted RBP26.3■■□□□ 1.8
APOE-203ENST00000434152 NFKBIEO00221 500 aa26.29■■□□□ 1.8
APOE-203ENST00000434152 TOMM70O94826 608 aa26.29■■□□□ 1.8
APOE-203ENST00000434152 STYK1Q6J9G0 422 aa26.29■■□□□ 1.8
APOE-203ENST00000434152 ANKRD31Q8N7Z5 1873 aa26.29■■□□□ 1.8
APOE-203ENST00000434152 CNKSR1Q969H4 720 aa26.28■■□□□ 1.8
APOE-203ENST00000434152 MASTLQ96GX5 879 aa26.28■■□□□ 1.8
APOE-203ENST00000434152 KDM2BQ8NHM5 1336 aa26.28■■□□□ 1.8
APOE-203ENST00000434152 ZNF521Q96K83 1311 aa26.28■■□□□ 1.8
APOE-203ENST00000434152 DLEC1Q9Y238 1755 aa26.28■■□□□ 1.8
APOE-203ENST00000434152 FAM177BA6PVY3 158 aa26.27■■□□□ 1.8
APOE-203ENST00000434152 MYL6BP14649 208 aa26.27■■□□□ 1.8
APOE-203ENST00000434152 KRT24Q2M2I5 525 aa26.27■■□□□ 1.8
APOE-203ENST00000434152 DUSP27Q5VZP5 1158 aa26.27■■□□□ 1.8
APOE-203ENST00000434152 ERVV-1B6SEH8 477 aa26.26■■□□□ 1.79
APOE-203ENST00000434152 EIF2S2P20042 333 aaKnown RBP26.26■■□□□ 1.79
APOE-203ENST00000434152 PDIA6Q15084 440 aa26.26■■□□□ 1.79
APOE-203ENST00000434152 TTLL7Q6ZT98 887 aa26.26■■□□□ 1.79
APOE-203ENST00000434152 RRAGCQ9HB90 399 aa26.26■■□□□ 1.79
APOE-203ENST00000434152 LRP10Q7Z4F1 713 aa26.25■■□□□ 1.79
APOE-203ENST00000434152 SALL2Q9Y467 1007 aaPredicted RBP26.25■■□□□ 1.79
APOE-203ENST00000434152 SBF1O95248 1867 aa26.24■■□□□ 1.79
APOE-203ENST00000434152 MAP3K15Q6ZN16 1313 aa26.24■■□□□ 1.79
APOE-203ENST00000434152 KLRG2A4D1S0 409 aaPredicted RBP26.24■■□□□ 1.79
APOE-203ENST00000434152 PRPF40BQ6NWY9 871 aaKnown RBP26.24■■□□□ 1.79
APOE-203ENST00000434152 DDX21Q9NR30 783 aaKnown RBP eCLIP26.24■■□□□ 1.79
APOE-203ENST00000434152 ZC3H4Q9UPT8 1303 aaKnown RBP26.23■■□□□ 1.79
APOE-203ENST00000434152 HDGFL1Q5TGJ6 251 aa26.23■■□□□ 1.79
APOE-203ENST00000434152 KIF6Q6ZMV9 814 aa26.22■■□□□ 1.79
APOE-203ENST00000434152 C8orf58Q8NAV2 365 aa26.22■■□□□ 1.79
APOE-203ENST00000434152 DBF4Q9UBU7 674 aaPredicted RBP26.22■■□□□ 1.79
APOE-203ENST00000434152 GLTPD2A6NH11 291 aa26.21■■□□□ 1.79
APOE-203ENST00000434152 NPR1P16066 1061 aa26.21■■□□□ 1.79
APOE-203ENST00000434152 GTF2E1P29083 439 aaPredicted RBP26.21■■□□□ 1.79
APOE-203ENST00000434152 C16orf71Q8IYS4 520 aaPredicted RBP26.21■■□□□ 1.79
APOE-203ENST00000434152 TSR2Q969E8 191 aaKnown RBP26.21■■□□□ 1.79
APOE-203ENST00000434152 ZBTB3Q9H5J0 574 aa26.21■■□□□ 1.79
APOE-203ENST00000434152 MYH16Q9H6N6 1097 aa26.21■■□□□ 1.79
APOE-203ENST00000434152 NUP98P52948 1817 aa26.21■■□□□ 1.79
APOE-203ENST00000434152 FANCIQ9NVI1 1328 aa26.2■■□□□ 1.79
APOE-203ENST00000434152 COL11A2P13942 1736 aaPredicted RBP26.2■■□□□ 1.79
APOE-203ENST00000434152 RBM46Q8TBY0 533 aaKnown RBP26.2■■□□□ 1.78
APOE-203ENST00000434152 C7orf43Q8WVR3 580 aa26.2■■□□□ 1.78
APOE-203ENST00000434152 GOLGA2Q08379 1002 aa26.19■■□□□ 1.78
APOE-203ENST00000434152 TAOK3Q9H2K8 898 aa26.18■■□□□ 1.78
APOE-203ENST00000434152 LTBP3Q9NS15 1303 aa26.17■■□□□ 1.78
APOE-203ENST00000434152 GPTP24298 496 aa26.17■■□□□ 1.78
APOE-203ENST00000434152 PROSER3Q2NL68 480 aa26.17■■□□□ 1.78
APOE-203ENST00000434152 ERFEQ4G0M1 354 aa26.17■■□□□ 1.78
APOE-203ENST00000434152 SOGA3Q5TF21 947 aa26.17■■□□□ 1.78
APOE-203ENST00000434152 NUTM1Q86Y26 1132 aa26.17■■□□□ 1.78
APOE-203ENST00000434152 NYXQ9GZU5 481 aa26.17■■□□□ 1.78
APOE-203ENST00000434152 HYPKQ9NX55 129 aa26.17■■□□□ 1.78
APOE-203ENST00000434152 CHPF2Q9P2E5 772 aa26.17■■□□□ 1.78
APOE-203ENST00000434152 SLX4Q8IY92 1834 aa26.16■■□□□ 1.78
APOE-203ENST00000434152 CEP350Q5VT06 3117 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms