RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 VTI1AQ96AJ9 217 aa6.62□□□□□ -1.35
LINC01239-201ENST00000433645 HCN4Q9Y3Q4 1203 aa6.62□□□□□ -1.35
LINC01239-201ENST00000433645 FKBP5Q13451 457 aaPredicted RBP6.61□□□□□ -1.35
LINC01239-201ENST00000433645 B4GALNT3Q6L9W6 998 aa6.61□□□□□ -1.35
LINC01239-201ENST00000433645 ZCCHC2Q9C0B9 1178 aaKnown RBP6.61□□□□□ -1.35
LINC01239-201ENST00000433645 NEUROD4Q9HD90 331 aa6.61□□□□□ -1.35
LINC01239-201ENST00000433645 GJA3Q9Y6H8 435 aa6.61□□□□□ -1.35
LINC01239-201ENST00000433645 ATXN7O15265 892 aaPredicted RBP6.6□□□□□ -1.35
LINC01239-201ENST00000433645 PRMT3O60678 531 aa6.6□□□□□ -1.35
LINC01239-201ENST00000433645 ATP2B4P23634 1241 aa6.6□□□□□ -1.35
LINC01239-201ENST00000433645 SSFA2P28290 1259 aa6.6□□□□□ -1.35
LINC01239-201ENST00000433645 FAM182BQ5T319 152 aa6.6□□□□□ -1.35
LINC01239-201ENST00000433645 PRIMPOLQ96LW4 560 aa6.6□□□□□ -1.35
LINC01239-201ENST00000433645 COL25A1Q9BXS0 654 aaPredicted RBP6.6□□□□□ -1.35
LINC01239-201ENST00000433645 MBIPQ9NS73 344 aa6.6□□□□□ -1.35
LINC01239-201ENST00000433645 NSFL1CQ9UNZ2 370 aaKnown RBP6.6□□□□□ -1.35
LINC01239-201ENST00000433645 EFSO43281 561 aa6.59□□□□□ -1.35
LINC01239-201ENST00000433645 SLURP2P0DP57 97 aa6.59□□□□□ -1.35
LINC01239-201ENST00000433645 SRSF11Q05519 484 aaKnown RBP6.59□□□□□ -1.35
LINC01239-201ENST00000433645 TNP2Q05952 138 aa6.59□□□□□ -1.35
LINC01239-201ENST00000433645 GAS6Q14393 721 aa6.59□□□□□ -1.35
LINC01239-201ENST00000433645 SUSD3Q96L08 255 aa6.59□□□□□ -1.35
LINC01239-201ENST00000433645 QTRT2Q9H974 415 aaKnown RBP6.59□□□□□ -1.35
LINC01239-201ENST00000433645 SLAIN2Q9P270 581 aa6.59□□□□□ -1.35
LINC01239-201ENST00000433645 TGFBR3LH3BV60 316 aa6.58□□□□□ -1.36
LINC01239-201ENST00000433645 BNIP3LO60238 219 aa6.58□□□□□ -1.36
LINC01239-201ENST00000433645 KCNQ4P56696 695 aa6.58□□□□□ -1.36
LINC01239-201ENST00000433645 INSM1Q01101 510 aaPredicted RBP6.58□□□□□ -1.36
LINC01239-201ENST00000433645 C11orf91Q3C1V1 193 aa6.58□□□□□ -1.36
LINC01239-201ENST00000433645 C11orf16Q9NQ32 467 aa6.58□□□□□ -1.36
LINC01239-201ENST00000433645 LGR5O75473 907 aa6.57□□□□□ -1.36
LINC01239-201ENST00000433645 MX2P20592 715 aa6.57□□□□□ -1.36
LINC01239-201ENST00000433645 MAP2K3P46734 347 aa6.57□□□□□ -1.36
LINC01239-201ENST00000433645 KRT76Q01546 638 aa6.57□□□□□ -1.36
LINC01239-201ENST00000433645 RNFT1Q5M7Z0 435 aa6.57□□□□□ -1.36
LINC01239-201ENST00000433645 LRRC69Q6ZNQ3 347 aa6.57□□□□□ -1.36
LINC01239-201ENST00000433645 LRRC4BQ9NT99 713 aa6.57□□□□□ -1.36
LINC01239-201ENST00000433645 MTMR7Q9Y216 660 aa6.57□□□□□ -1.36
LINC01239-201ENST00000433645 GPR25O00155 361 aa6.56□□□□□ -1.36
LINC01239-201ENST00000433645 MAPTP10636 758 aaKnown RBP6.56□□□□□ -1.36
LINC01239-201ENST00000433645 FGFR3P22607 806 aa6.56□□□□□ -1.36
LINC01239-201ENST00000433645 C16orf46Q6P387 395 aa6.56□□□□□ -1.36
LINC01239-201ENST00000433645 RETREG2Q8NC44 543 aa6.56□□□□□ -1.36
LINC01239-201ENST00000433645 NGLY1Q96IV0 654 aa6.56□□□□□ -1.36
LINC01239-201ENST00000433645 CNTNAP3BQ96NU0 1288 aa6.56□□□□□ -1.36
LINC01239-201ENST00000433645 CNTNAP3Q9BZ76 1288 aa6.56□□□□□ -1.36
LINC01239-201ENST00000433645 EFCC1Q9HA90 598 aa6.56□□□□□ -1.36
LINC01239-201ENST00000433645 AVENQ9NQS1 362 aaPredicted RBP6.56□□□□□ -1.36
LINC01239-201ENST00000433645 TYRO3Q06418 890 aa6.55□□□□□ -1.36
LINC01239-201ENST00000433645 BTLAQ7Z6A9 289 aa6.55□□□□□ -1.36
LINC01239-201ENST00000433645 ZNF280CQ8ND82 737 aa6.55□□□□□ -1.36
LINC01239-201ENST00000433645 ABHD17AQ96GS6 310 aa6.55□□□□□ -1.36
LINC01239-201ENST00000433645 MARK1Q9P0L2 795 aa6.55□□□□□ -1.36
LINC01239-201ENST00000433645 DMGDHQ9UI17 866 aaKnown RBP6.55□□□□□ -1.36
LINC01239-201ENST00000433645 KHNYNO15037 678 aaKnown RBP6.54□□□□□ -1.36
LINC01239-201ENST00000433645 BRD2P25440 801 aaKnown RBP6.54□□□□□ -1.36
LINC01239-201ENST00000433645 DGKZQ13574 1117 aa6.54□□□□□ -1.36
LINC01239-201ENST00000433645 COX20Q5RI15 118 aa6.54□□□□□ -1.36
LINC01239-201ENST00000433645 PHLDB3Q6NSJ2 640 aa6.54□□□□□ -1.36
LINC01239-201ENST00000433645 LRFN2Q9ULH4 789 aa6.54□□□□□ -1.36
LINC01239-201ENST00000433645 BCS1LQ9Y276 419 aa6.54□□□□□ -1.36
LINC01239-201ENST00000433645 IGF1RP08069 1367 aa6.54□□□□□ -1.36
LINC01239-201ENST00000433645 ADAMTS2O95450 1211 aa6.53□□□□□ -1.36
LINC01239-201ENST00000433645 EPB42P16452 691 aa6.53□□□□□ -1.36
LINC01239-201ENST00000433645 KLRG1Q96E93 195 aa6.53□□□□□ -1.36
LINC01239-201ENST00000433645 IFT43Q96FT9 208 aa6.53□□□□□ -1.36
LINC01239-201ENST00000433645 HSH2DQ96JZ2 352 aa6.53□□□□□ -1.36
LINC01239-201ENST00000433645 CEP63Q96MT8 703 aa6.53□□□□□ -1.36
LINC01239-201ENST00000433645 BRD7Q9NPI1 651 aa6.53□□□□□ -1.36
LINC01239-201ENST00000433645 GDF2Q9UK05 429 aaPredicted RBP6.53□□□□□ -1.36
LINC01239-201ENST00000433645 DCDC2BA2VCK2 349 aa6.52□□□□□ -1.37
LINC01239-201ENST00000433645 ARAFP10398 606 aa6.52□□□□□ -1.37
LINC01239-201ENST00000433645 BMP4P12644 408 aa6.52□□□□□ -1.37
LINC01239-201ENST00000433645 LORP23490 312 aaPredicted RBP6.52□□□□□ -1.37
LINC01239-201ENST00000433645 INPP5BP32019 993 aa6.52□□□□□ -1.37
LINC01239-201ENST00000433645 ZSCAN1Q8NBB4 408 aa6.52□□□□□ -1.37
LINC01239-201ENST00000433645 FAM13BQ9NYF5 915 aa6.52□□□□□ -1.37
LINC01239-201ENST00000433645 KLK14Q9P0G3 267 aa6.52□□□□□ -1.37
LINC01239-201ENST00000433645 STIM2Q9P246 746 aa6.52□□□□□ -1.37
LINC01239-201ENST00000433645 KCNH4Q9UQ05 1017 aa6.52□□□□□ -1.37
LINC01239-201ENST00000433645 TNFRSF10BO14763 440 aa6.51□□□□□ -1.37
LINC01239-201ENST00000433645 MICAL2O94851 1124 aa6.51□□□□□ -1.37
LINC01239-201ENST00000433645 BRD1O95696 1058 aa6.51□□□□□ -1.37
LINC01239-201ENST00000433645 ARID4AP29374 1257 aaPredicted RBP6.51□□□□□ -1.37
LINC01239-201ENST00000433645 ARSDP51689 593 aa6.51□□□□□ -1.37
LINC01239-201ENST00000433645 CTBSQ01459 385 aa6.51□□□□□ -1.37
LINC01239-201ENST00000433645 ABTB2Q8N961 1025 aa6.51□□□□□ -1.37
LINC01239-201ENST00000433645 HELQQ8TDG4 1101 aa6.51□□□□□ -1.37
LINC01239-201ENST00000433645 MKNK1Q9BUB5 465 aa6.51□□□□□ -1.37
LINC01239-201ENST00000433645 SAP130Q9H0E3 1048 aa6.51□□□□□ -1.37
LINC01239-201ENST00000433645 EGFL7Q9UHF1 273 aa6.51□□□□□ -1.37
LINC01239-201ENST00000433645 HCN2Q9UL51 889 aa6.51□□□□□ -1.37
LINC01239-201ENST00000433645 C2CD2LO14523 706 aa6.5□□□□□ -1.37
LINC01239-201ENST00000433645 NPR3P17342 541 aa6.5□□□□□ -1.37
LINC01239-201ENST00000433645 IDH3AP50213 366 aa6.5□□□□□ -1.37
LINC01239-201ENST00000433645 SF3B2Q13435 895 aaKnown RBP6.5□□□□□ -1.37
LINC01239-201ENST00000433645 NEUROD1Q13562 356 aa6.5□□□□□ -1.37
LINC01239-201ENST00000433645 ZNF468Q5VIY5 522 aaPredicted RBP6.5□□□□□ -1.37
LINC01239-201ENST00000433645 CAPN12Q6ZSI9 719 aa6.5□□□□□ -1.37
LINC01239-201ENST00000433645 GOLGA6L1Q8N7Z2 621 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms