RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 ZNF652Q9Y2D9 606 aa28.87■■■□□ 2.21
RPUSD3-206ENST00000433535 PDZRN3Q9UPQ7 1066 aa28.86■■■□□ 2.21
RPUSD3-206ENST00000433535 CLEC4GQ6UXB4 293 aa28.85■■■□□ 2.21
RPUSD3-206ENST00000433535 NBPF5PQ86XG9 351 aaPredicted RBP28.85■■■□□ 2.21
RPUSD3-206ENST00000433535 PNISRQ8TF01 805 aaKnown RBP28.85■■■□□ 2.21
RPUSD3-206ENST00000433535 CEP350Q5VT06 3117 aa28.85■■■□□ 2.21
RPUSD3-206ENST00000433535 ARFGEF2Q9Y6D5 1785 aa28.85■■■□□ 2.21
RPUSD3-206ENST00000433535 C21orf2O43822 256 aa28.84■■■□□ 2.21
RPUSD3-206ENST00000433535 FER1L6Q2WGJ9 1857 aa28.84■■■□□ 2.21
RPUSD3-206ENST00000433535 SLX4Q8IY92 1834 aa28.83■■■□□ 2.21
RPUSD3-206ENST00000433535 RALBP1Q15311 655 aa28.83■■■□□ 2.21
RPUSD3-206ENST00000433535 C16orf71Q8IYS4 520 aaPredicted RBP28.83■■■□□ 2.21
RPUSD3-206ENST00000433535 ZC3H4Q9UPT8 1303 aaKnown RBP28.83■■■□□ 2.21
RPUSD3-206ENST00000433535 EIF4A1P60842 406 aaKnown RBP28.82■■■□□ 2.2
RPUSD3-206ENST00000433535 PNNQ9H307 717 aaKnown RBP28.82■■■□□ 2.2
RPUSD3-206ENST00000433535 RRAGCQ9HB90 399 aa28.82■■■□□ 2.2
RPUSD3-206ENST00000433535 NIP7Q9Y221 180 aaKnown RBP eCLIP28.82■■■□□ 2.2
RPUSD3-206ENST00000433535 SRGNP10124 158 aa28.81■■■□□ 2.2
RPUSD3-206ENST00000433535 DDX10Q13206 875 aaKnown RBP28.81■■■□□ 2.2
RPUSD3-206ENST00000433535 HLFQ16534 295 aa28.8■■■□□ 2.2
RPUSD3-206ENST00000433535 STYK1Q6J9G0 422 aa28.8■■■□□ 2.2
RPUSD3-206ENST00000433535 PRPF40BQ6NWY9 871 aaKnown RBP28.8■■■□□ 2.2
RPUSD3-206ENST00000433535 NGEFQ8N5V2 710 aa28.8■■■□□ 2.2
RPUSD3-206ENST00000433535 RBM46Q8TBY0 533 aaKnown RBP28.8■■■□□ 2.2
RPUSD3-206ENST00000433535 FAM177BA6PVY3 158 aa28.79■■■□□ 2.2
RPUSD3-206ENST00000433535 CNKSR1Q969H4 720 aa28.78■■■□□ 2.2
RPUSD3-206ENST00000433535 MASTLQ96GX5 879 aa28.78■■■□□ 2.2
RPUSD3-206ENST00000433535 RGL2O15211 777 aa28.77■■■□□ 2.2
RPUSD3-206ENST00000433535 DICER1Q9UPY3 1922 aaKnown RBP28.77■■■□□ 2.2
RPUSD3-206ENST00000433535 APLP1P51693 650 aa28.76■■■□□ 2.19
RPUSD3-206ENST00000433535 RRP7AQ9Y3A4 280 aaKnown RBP28.76■■■□□ 2.19
RPUSD3-206ENST00000433535 WDR90Q96KV7 1748 aa28.76■■■□□ 2.19
RPUSD3-206ENST00000433535 NUP98P52948 1817 aa28.76■■■□□ 2.19
RPUSD3-206ENST00000433535 GLTPD2A6NH11 291 aa28.75■■■□□ 2.19
RPUSD3-206ENST00000433535 RIPK4P57078 832 aa28.75■■■□□ 2.19
RPUSD3-206ENST00000433535 MYBBP1AQ9BQG0 1328 aaKnown RBP28.74■■■□□ 2.19
RPUSD3-206ENST00000433535 MYL6BP14649 208 aa28.74■■■□□ 2.19
RPUSD3-206ENST00000433535 TPTE2Q6XPS3 522 aa28.74■■■□□ 2.19
RPUSD3-206ENST00000433535 TAOK3Q9H2K8 898 aa28.74■■■□□ 2.19
RPUSD3-206ENST00000433535 TSPYL4Q9UJ04 414 aa28.74■■■□□ 2.19
RPUSD3-206ENST00000433535 TTLL7Q6ZT98 887 aa28.73■■■□□ 2.19
RPUSD3-206ENST00000433535 MAP3K15Q6ZN16 1313 aa28.72■■■□□ 2.19
RPUSD3-206ENST00000433535 ERFEQ4G0M1 354 aa28.72■■■□□ 2.19
RPUSD3-206ENST00000433535 LTBP3Q9NS15 1303 aa28.71■■■□□ 2.19
RPUSD3-206ENST00000433535 NPR1P16066 1061 aa28.71■■■□□ 2.19
RPUSD3-206ENST00000433535 TMPOP42166 694 aaKnown RBP28.71■■■□□ 2.19
RPUSD3-206ENST00000433535 KIF6Q6ZMV9 814 aa28.71■■■□□ 2.19
RPUSD3-206ENST00000433535 CCDC146Q8IYE0 955 aa28.71■■■□□ 2.19
RPUSD3-206ENST00000433535 ABCC12Q96J65 1359 aa28.71■■■□□ 2.19
RPUSD3-206ENST00000433535 KLRG2A4D1S0 409 aaPredicted RBP28.7■■■□□ 2.18
RPUSD3-206ENST00000433535 FSTL1Q12841 308 aa28.7■■■□□ 2.18
RPUSD3-206ENST00000433535 ZBTB3Q9H5J0 574 aa28.7■■■□□ 2.18
RPUSD3-206ENST00000433535 ERVV-1B6SEH8 477 aa28.69■■■□□ 2.18
RPUSD3-206ENST00000433535 SOGA3Q5TF21 947 aa28.69■■■□□ 2.18
RPUSD3-206ENST00000433535 GTF2E1P29083 439 aaPredicted RBP28.68■■■□□ 2.18
RPUSD3-206ENST00000433535 NUTM1Q86Y26 1132 aa28.68■■■□□ 2.18
RPUSD3-206ENST00000433535 VEGFAP15692 232 aaPredicted RBP28.67■■■□□ 2.18
RPUSD3-206ENST00000433535 GPTP24298 496 aa28.67■■■□□ 2.18
RPUSD3-206ENST00000433535 HTRA3P83110 453 aa28.67■■■□□ 2.18
RPUSD3-206ENST00000433535 C7orf43Q8WVR3 580 aa28.67■■■□□ 2.18
RPUSD3-206ENST00000433535 UBN2Q6ZU65 1347 aa28.67■■■□□ 2.18
RPUSD3-206ENST00000433535 LMOD3Q0VAK6 560 aa28.66■■■□□ 2.18
RPUSD3-206ENST00000433535 NEUROD2Q15784 382 aa28.66■■■□□ 2.18
RPUSD3-206ENST00000433535 OLFM4Q6UX06 510 aa28.66■■■□□ 2.18
RPUSD3-206ENST00000433535 SMC1BQ8NDV3 1235 aa28.66■■■□□ 2.18
RPUSD3-206ENST00000433535 ERBB4Q15303 1308 aa28.66■■■□□ 2.18
RPUSD3-206ENST00000433535 EIF2S2P20042 333 aaKnown RBP28.65■■■□□ 2.18
RPUSD3-206ENST00000433535 CCDC93Q567U6 631 aa28.65■■■□□ 2.18
RPUSD3-206ENST00000433535 DPY19L2Q6NUT2 758 aa28.65■■■□□ 2.18
RPUSD3-206ENST00000433535 NYXQ9GZU5 481 aa28.64■■■□□ 2.18
RPUSD3-206ENST00000433535 POTECB2RU33 542 aa28.63■■■□□ 2.17
RPUSD3-206ENST00000433535 DNAJC5GQ8N7S2 189 aa28.63■■■□□ 2.17
RPUSD3-206ENST00000433535 ANXA1P04083 346 aa28.62■■■□□ 2.17
RPUSD3-206ENST00000433535 WDR43Q15061 677 aaKnown RBP eCLIP28.62■■■□□ 2.17
RPUSD3-206ENST00000433535 PROSER3Q2NL68 480 aa28.62■■■□□ 2.17
RPUSD3-206ENST00000433535 LRP10Q7Z4F1 713 aa28.62■■■□□ 2.17
RPUSD3-206ENST00000433535 IBTKQ9P2D0 1353 aaPredicted RBP28.62■■■□□ 2.17
RPUSD3-206ENST00000433535 PDIA6Q15084 440 aa28.61■■■□□ 2.17
RPUSD3-206ENST00000433535 SUSD4Q5VX71 490 aa28.61■■■□□ 2.17
RPUSD3-206ENST00000433535 BABAM1Q9NWV8 329 aa28.61■■■□□ 2.17
RPUSD3-206ENST00000433535 CRY2Q49AN0 593 aa28.6■■■□□ 2.17
RPUSD3-206ENST00000433535 ZNF34Q8IZ26 560 aa28.6■■■□□ 2.17
RPUSD3-206ENST00000433535 NECTIN2Q92692 538 aa28.6■■■□□ 2.17
RPUSD3-206ENST00000433535 DDNO94850 711 aaPredicted RBP28.59■■■□□ 2.17
RPUSD3-206ENST00000433535 FKBP4Q02790 459 aaKnown RBP eCLIP28.59■■■□□ 2.17
RPUSD3-206ENST00000433535 GIGYF2Q6Y7W6 1299 aaKnown RBP28.59■■■□□ 2.17
RPUSD3-206ENST00000433535 RUNDC1Q96C34 613 aa28.59■■■□□ 2.17
RPUSD3-206ENST00000433535 ZNF277Q9NRM2 450 aaPredicted RBP28.59■■■□□ 2.17
RPUSD3-206ENST00000433535 RIC1Q4ADV7 1423 aa28.59■■■□□ 2.17
RPUSD3-206ENST00000433535 ALDH1B1P30837 517 aa28.58■■■□□ 2.17
RPUSD3-206ENST00000433535 KRT24Q2M2I5 525 aa28.58■■■□□ 2.17
RPUSD3-206ENST00000433535 TRIM35Q9UPQ4 493 aa28.58■■■□□ 2.17
RPUSD3-206ENST00000433535 NTSR2O95665 410 aa28.57■■■□□ 2.16
RPUSD3-206ENST00000433535 ADAMTS8Q9UP79 889 aa28.57■■■□□ 2.16
RPUSD3-206ENST00000433535 ANKRD36CQ5JPF3 1778 aa28.57■■■□□ 2.16
RPUSD3-206ENST00000433535 SNED1Q8TER0 1413 aa28.56■■■□□ 2.16
RPUSD3-206ENST00000433535 LAS1LQ9Y4W2 734 aaKnown RBP28.56■■■□□ 2.16
RPUSD3-206ENST00000433535 RTKN2Q8IZC4 609 aa28.55■■■□□ 2.16
RPUSD3-206ENST00000433535 RPGRQ92834 1020 aaKnown RBP28.55■■■□□ 2.16
RPUSD3-206ENST00000433535 PRKRIP1Q9H875 184 aaPredicted RBP28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms