RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 CDKL5O76039 1030 aa12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 YEATS4O95619 227 aa12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 TTC22Q5TAA0 569 aa12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 GIGYF2Q6Y7W6 1299 aaKnown RBP12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 CEP112Q8N8E3 955 aa12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 GPRASP1Q5JY77 1395 aa12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 CFAP70Q5T0N1 1121 aa12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 CCDC121Q6ZUS5 278 aa12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 AACSQ86V21 672 aa12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 AMOTL1Q8IY63 956 aa12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 ZGPATQ8N5A5 531 aaKnown RBP12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 CAMSAP2Q08AD1 1489 aa12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 DNA2P51530 1060 aa12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 UBASH3AP57075 661 aa12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 GUCY1B3Q02153 619 aa12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 TTC5Q8N0Z6 440 aa12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 CDK5RAP3Q96JB5 506 aa12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 HYPKQ9NX55 129 aa12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 TARBP1Q13395 1621 aaKnown RBP12.04□□□□□ -0.48
PKNOX1-203ENST00000432907 USO1O60763 962 aaKnown RBP12.04□□□□□ -0.48
PKNOX1-203ENST00000432907 ZSCAN26Q16670 478 aa12.04□□□□□ -0.48
PKNOX1-203ENST00000432907 SYT1P21579 422 aa12.04□□□□□ -0.48
PKNOX1-203ENST00000432907 CCDC114Q96M63 670 aa12.04□□□□□ -0.48
PKNOX1-203ENST00000432907 EVCP57679 992 aa12.04□□□□□ -0.48
PKNOX1-203ENST00000432907 ANKRD18AQ8IVF6 992 aa12.04□□□□□ -0.48
PKNOX1-203ENST00000432907 NAA15Q9BXJ9 866 aaKnown RBP12.04□□□□□ -0.48
PKNOX1-203ENST00000432907 MATR3P43243 847 aaKnown RBP eCLIP12.04□□□□□ -0.48
PKNOX1-203ENST00000432907 HDXQ7Z353 690 aa12.04□□□□□ -0.48
PKNOX1-203ENST00000432907 OPA1O60313 960 aa12.03□□□□□ -0.48
PKNOX1-203ENST00000432907 SYCP1Q15431 976 aa12.03□□□□□ -0.48
PKNOX1-203ENST00000432907 JADE2Q9NQC1 790 aa12.03□□□□□ -0.48
PKNOX1-203ENST00000432907 DNAJC21Q5F1R6 531 aaKnown RBP12.03□□□□□ -0.48
PKNOX1-203ENST00000432907 ISM2Q6H9L7 571 aa12.03□□□□□ -0.48
PKNOX1-203ENST00000432907 CNNM3Q8NE01 707 aa12.03□□□□□ -0.48
PKNOX1-203ENST00000432907 GLRX3O76003 335 aaKnown RBP12.03□□□□□ -0.48
PKNOX1-203ENST00000432907 DNM1Q05193 864 aaKnown RBP12.03□□□□□ -0.48
PKNOX1-203ENST00000432907 AOPEPQ8N6M6 819 aa12.03□□□□□ -0.48
PKNOX1-203ENST00000432907 RBM28Q9NW13 759 aaKnown RBP12.02□□□□□ -0.48
PKNOX1-203ENST00000432907 FSD2A1L4K1 749 aa12.02□□□□□ -0.49
PKNOX1-203ENST00000432907 F13A1P00488 732 aa12.02□□□□□ -0.49
PKNOX1-203ENST00000432907 TMEM132EQ6IEE7 984 aa12.02□□□□□ -0.49
PKNOX1-203ENST00000432907 GCOM1H8Y6P7 765 aaPredicted RBP12.02□□□□□ -0.49
PKNOX1-203ENST00000432907 ZEB2O60315 1214 aa12.02□□□□□ -0.49
PKNOX1-203ENST00000432907 MYZAPP0CAP1 466 aa12.02□□□□□ -0.49
PKNOX1-203ENST00000432907 CLNS1AP54105 237 aaKnown RBP12.02□□□□□ -0.49
PKNOX1-203ENST00000432907 CKAP4Q07065 602 aaKnown RBP12.02□□□□□ -0.49
PKNOX1-203ENST00000432907 C8orf76Q96K31 380 aa12.02□□□□□ -0.49
PKNOX1-203ENST00000432907 GOPCQ9HD26 462 aa12.02□□□□□ -0.49
PKNOX1-203ENST00000432907 RAD21O60216 631 aa12.02□□□□□ -0.49
PKNOX1-203ENST00000432907 ATP6V1AP38606 617 aa12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 TUBB4BP68371 445 aa12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 CCDC178Q5BJE1 867 aa12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 HDGFL1Q5TGJ6 251 aa12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 INPP5BP32019 993 aa12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 PPP2R3AQ06190 1150 aa12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 FAM76AQ8TAV0 307 aa12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 PUF60Q9UHX1 559 aaKnown RBP12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 PIP4K2BP78356 416 aa12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 KIF1BPQ96EK5 621 aa12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 NAIPQ13075 1403 aa12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 ATP10BO94823 1461 aa12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 RHOXF2BP0C7M4 288 aa12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 SDSP20132 328 aa12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 GTF2E1P29083 439 aaPredicted RBP12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 POTEDQ86YR6 584 aa12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 RHOXF2Q9BQY4 288 aa12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 TBC1D2BQ9UPU7 963 aa12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 ANKRD30BQ9BXX2 1392 aa12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 NUP153P49790 1475 aaKnown RBP12.01□□□□□ -0.49
PKNOX1-203ENST00000432907 TUBBP07437 444 aa12□□□□□ -0.49
PKNOX1-203ENST00000432907 OAS2P29728 719 aaKnown RBP12□□□□□ -0.49
PKNOX1-203ENST00000432907 ALS2CR12Q96Q35 445 aa12□□□□□ -0.49
PKNOX1-203ENST00000432907 SPG7Q9UQ90 795 aa12□□□□□ -0.49
PKNOX1-203ENST00000432907 CTAGE9A4FU28 777 aa12□□□□□ -0.49
PKNOX1-203ENST00000432907 SSBP05455 408 aaKnown RBP eCLIP12□□□□□ -0.49
PKNOX1-203ENST00000432907 GAS2L3Q86XJ1 694 aa12□□□□□ -0.49
PKNOX1-203ENST00000432907 EHBP1Q8NDI1 1231 aa12□□□□□ -0.49
PKNOX1-203ENST00000432907 ABCC5O15440 1437 aa12□□□□□ -0.49
PKNOX1-203ENST00000432907 MTMR7Q9Y216 660 aa12□□□□□ -0.49
PKNOX1-203ENST00000432907 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.99□□□□□ -0.49
PKNOX1-203ENST00000432907 CEP131Q9UPN4 1083 aa11.99□□□□□ -0.49
PKNOX1-203ENST00000432907 FYB1O15117 783 aa11.99□□□□□ -0.49
PKNOX1-203ENST00000432907 NEK11Q8NG66 645 aa11.99□□□□□ -0.49
PKNOX1-203ENST00000432907 AFAP1L1Q8TED9 768 aa11.99□□□□□ -0.49
PKNOX1-203ENST00000432907 NUP133Q8WUM0 1156 aa11.99□□□□□ -0.49
PKNOX1-203ENST00000432907 PAIP2Q9BPZ3 127 aaKnown RBP11.99□□□□□ -0.49
PKNOX1-203ENST00000432907 ADGRL1O94910 1474 aa11.99□□□□□ -0.49
PKNOX1-203ENST00000432907 KDM2BQ8NHM5 1336 aa11.99□□□□□ -0.49
PKNOX1-203ENST00000432907 FCHSD2O94868 740 aa11.99□□□□□ -0.49
PKNOX1-203ENST00000432907 KRT18P05783 430 aaKnown RBP11.99□□□□□ -0.49
PKNOX1-203ENST00000432907 TCEAL9Q9UHQ7 104 aa11.99□□□□□ -0.49
PKNOX1-203ENST00000432907 CTNNA3Q9UI47 895 aa11.99□□□□□ -0.49
PKNOX1-203ENST00000432907 FKBP15Q5T1M5 1219 aa11.99□□□□□ -0.49
PKNOX1-203ENST00000432907 CCDC43Q96MW1 224 aaKnown RBP11.99□□□□□ -0.49
PKNOX1-203ENST00000432907 THUMPD2Q9BTF0 503 aaKnown RBP11.99□□□□□ -0.49
PKNOX1-203ENST00000432907 KIF5BP33176 963 aa11.98□□□□□ -0.49
PKNOX1-203ENST00000432907 CCDC6Q16204 474 aa11.98□□□□□ -0.49
PKNOX1-203ENST00000432907 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.98□□□□□ -0.49
PKNOX1-203ENST00000432907 FBF1Q8TES7 1133 aa11.98□□□□□ -0.49
PKNOX1-203ENST00000432907 NEBLO76041 1014 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms