RNA–Protein interactions for RNA: ENST00000432725.1

SF1-208, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-208ENST00000432725 RCAN3Q9UKA8 241 aa20.31■□□□□ 0.84
SF1-208ENST00000432725 BRCA1P38398 1863 aaKnown RBP20.3■□□□□ 0.84
SF1-208ENST00000432725 RGL2O15211 777 aa20.3■□□□□ 0.84
SF1-208ENST00000432725 GIGYF1O75420 1035 aaPredicted RBP20.3■□□□□ 0.84
SF1-208ENST00000432725 RIPK4P57078 832 aa20.3■□□□□ 0.84
SF1-208ENST00000432725 C1QTNF8P60827 252 aa20.3■□□□□ 0.84
SF1-208ENST00000432725 CALD1Q05682 793 aaKnown RBP20.3■□□□□ 0.84
SF1-208ENST00000432725 LMOD3Q0VAK6 560 aa20.3■□□□□ 0.84
SF1-208ENST00000432725 CLEC4GQ6UXB4 293 aa20.3■□□□□ 0.84
SF1-208ENST00000432725 CARMIL3Q8ND23 1372 aa20.3■□□□□ 0.84
SF1-208ENST00000432725 SENP3-EIF4A1A0A087X0R7 540 aa20.29■□□□□ 0.84
SF1-208ENST00000432725 SETDB2Q96T68 719 aa20.29■□□□□ 0.84
SF1-208ENST00000432725 MYH16Q9H6N6 1097 aa20.29■□□□□ 0.84
SF1-208ENST00000432725 DLG5Q8TDM6 1919 aa20.29■□□□□ 0.84
SF1-208ENST00000432725 AFDNP55196 1824 aaKnown RBP20.28■□□□□ 0.84
SF1-208ENST00000432725 BRIP1Q9BX63 1249 aa20.28■□□□□ 0.84
SF1-208ENST00000432725 KDM3BQ7LBC6 1761 aa20.27■□□□□ 0.84
SF1-208ENST00000432725 PRR5LQ6MZQ0 368 aa20.27■□□□□ 0.84
SF1-208ENST00000432725 C2CD5Q86YS7 1000 aa20.27■□□□□ 0.84
SF1-208ENST00000432725 GPBP1L1Q9HC44 474 aaPredicted RBP20.27■□□□□ 0.84
SF1-208ENST00000432725 BABAM1Q9NWV8 329 aa20.27■□□□□ 0.84
SF1-208ENST00000432725 PDZRN3Q9UPQ7 1066 aa20.27■□□□□ 0.84
SF1-208ENST00000432725 H0YIN7 160 aa20.26■□□□□ 0.83
SF1-208ENST00000432725 ZNF652Q9Y2D9 606 aa20.26■□□□□ 0.83
SF1-208ENST00000432725 CT47B1P0C2W7 299 aaPredicted RBP20.25■□□□□ 0.83
SF1-208ENST00000432725 PDE6BP35913 854 aa20.25■□□□□ 0.83
SF1-208ENST00000432725 NEUROD2Q15784 382 aa20.25■□□□□ 0.83
SF1-208ENST00000432725 RRP7AQ9Y3A4 280 aaKnown RBP20.25■□□□□ 0.83
SF1-208ENST00000432725 ARFGEF1Q9Y6D6 1849 aa20.25■□□□□ 0.83
SF1-208ENST00000432725 BCORQ6W2J9 1755 aa20.24■□□□□ 0.83
SF1-208ENST00000432725 TTLL6Q8N841 843 aa20.24■□□□□ 0.83
SF1-208ENST00000432725 CNBD1Q8NA66 436 aa20.24■□□□□ 0.83
SF1-208ENST00000432725 TSPYL4Q9UJ04 414 aa20.24■□□□□ 0.83
SF1-208ENST00000432725 TRIM35Q9UPQ4 493 aa20.24■□□□□ 0.83
SF1-208ENST00000432725 LAMB4A4D0S4 1761 aa20.23■□□□□ 0.83
SF1-208ENST00000432725 C9orf131Q5VYM1 1079 aa20.22■□□□□ 0.83
SF1-208ENST00000432725 CCDC24Q8N4L8 307 aa20.22■□□□□ 0.83
SF1-208ENST00000432725 ZNF526Q8TF50 670 aaPredicted RBP20.22■□□□□ 0.83
SF1-208ENST00000432725 RRP1P56182 461 aaKnown RBP20.21■□□□□ 0.83
SF1-208ENST00000432725 ST5P78524 1137 aa20.21■□□□□ 0.83
SF1-208ENST00000432725 ERBB4Q15303 1308 aa20.21■□□□□ 0.83
SF1-208ENST00000432725 ERVV-1B6SEH8 477 aa20.2■□□□□ 0.82
SF1-208ENST00000432725 HLFQ16534 295 aa20.2■□□□□ 0.82
SF1-208ENST00000432725 NBPF5PQ86XG9 351 aaPredicted RBP20.2■□□□□ 0.82
SF1-208ENST00000432725 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.2■□□□□ 0.82
SF1-208ENST00000432725 DLEC1Q9Y238 1755 aa20.2■□□□□ 0.82
SF1-208ENST00000432725 NPHP1O15259 732 aa20.19■□□□□ 0.82
SF1-208ENST00000432725 SPINK5Q9NQ38 1064 aaPredicted RBP20.19■□□□□ 0.82
SF1-208ENST00000432725 NIP7Q9Y221 180 aaKnown RBP eCLIP20.19■□□□□ 0.82
SF1-208ENST00000432725 CHL1O00533 1208 aa20.18■□□□□ 0.82
SF1-208ENST00000432725 TPTE2Q6XPS3 522 aa20.18■□□□□ 0.82
SF1-208ENST00000432725 ZNF622Q969S3 477 aaKnown RBP eCLIP20.18■□□□□ 0.828e-25■■□□□ 11.9
SF1-208ENST00000432725 MAP3K15Q6ZN16 1313 aa20.18■□□□□ 0.82
SF1-208ENST00000432725 ANKRD31Q8N7Z5 1873 aa20.18■□□□□ 0.82
SF1-208ENST00000432725 KLRG2A4D1S0 409 aaPredicted RBP20.17■□□□□ 0.82
SF1-208ENST00000432725 SRGNP10124 158 aa20.17■□□□□ 0.82
SF1-208ENST00000432725 MYL6BP14649 208 aa20.17■□□□□ 0.82
SF1-208ENST00000432725 STYK1Q6J9G0 422 aa20.17■□□□□ 0.82
SF1-208ENST00000432725 TTLL7Q6ZT98 887 aa20.17■□□□□ 0.82
SF1-208ENST00000432725 RNF181Q9P0P0 153 aa20.17■□□□□ 0.82
SF1-208ENST00000432725 KIF3CO14782 793 aa20.16■□□□□ 0.82
SF1-208ENST00000432725 KIF6Q6ZMV9 814 aa20.16■□□□□ 0.82
SF1-208ENST00000432725 LRP10Q7Z4F1 713 aa20.16■□□□□ 0.82
SF1-208ENST00000432725 GNAI1P63096 354 aa20.15■□□□□ 0.82
SF1-208ENST00000432725 PDIA6Q15084 440 aa20.15■□□□□ 0.82
SF1-208ENST00000432725 CNKSR1Q969H4 720 aa20.15■□□□□ 0.82
SF1-208ENST00000432725 MASTLQ96GX5 879 aa20.15■□□□□ 0.82
SF1-208ENST00000432725 IFT57Q9NWB7 429 aa20.15■□□□□ 0.82
SF1-208ENST00000432725 LMNB1P20700 586 aa20.14■□□□□ 0.81
SF1-208ENST00000432725 RASSF7Q02833 373 aa20.14■□□□□ 0.81
SF1-208ENST00000432725 ZNF428Q96B54 188 aa20.14■□□□□ 0.81
SF1-208ENST00000432725 COL11A2P13942 1736 aaPredicted RBP20.13■□□□□ 0.81
SF1-208ENST00000432725 ZC3H4Q9UPT8 1303 aaKnown RBP20.13■□□□□ 0.81
SF1-208ENST00000432725 NFKBIEO00221 500 aa20.13■□□□□ 0.81
SF1-208ENST00000432725 EIF2S2P20042 333 aaKnown RBP20.13■□□□□ 0.81
SF1-208ENST00000432725 PRELPP51888 382 aa20.13■□□□□ 0.81
SF1-208ENST00000432725 FANCIQ9NVI1 1328 aa20.12■□□□□ 0.81
SF1-208ENST00000432725 C21orf2O43822 256 aa20.12■□□□□ 0.81
SF1-208ENST00000432725 NPR1P16066 1061 aa20.12■□□□□ 0.81
SF1-208ENST00000432725 NYXQ9GZU5 481 aa20.12■□□□□ 0.81
SF1-208ENST00000432725 ZBTB3Q9H5J0 574 aa20.12■□□□□ 0.81
SF1-208ENST00000432725 PPP4R2Q9NY27 417 aa20.12■□□□□ 0.81
SF1-208ENST00000432725 FAM177BA6PVY3 158 aa20.11■□□□□ 0.81
SF1-208ENST00000432725 PRPF40BQ6NWY9 871 aaKnown RBP20.11■□□□□ 0.81
SF1-208ENST00000432725 GIGYF2Q6Y7W6 1299 aaKnown RBP20.11■□□□□ 0.81
SF1-208ENST00000432725 ZNF34Q8IZ26 560 aa20.11■□□□□ 0.81
SF1-208ENST00000432725 CFAP44Q96MT7 982 aa20.11■□□□□ 0.81
SF1-208ENST00000432725 IBTKQ9P2D0 1353 aaPredicted RBP20.1■□□□□ 0.81
SF1-208ENST00000432725 KDM2BQ8NHM5 1336 aa20.1■□□□□ 0.81
SF1-208ENST00000432725 ZNF853P0CG23 659 aa20.1■□□□□ 0.81
SF1-208ENST00000432725 PROSER3Q2NL68 480 aa20.1■□□□□ 0.81
SF1-208ENST00000432725 NMRK2Q9NPI5 230 aa20.1■□□□□ 0.81
SF1-208ENST00000432725 LAS1LQ9Y4W2 734 aaKnown RBP20.1■□□□□ 0.81
SF1-208ENST00000432725 UBN2Q6ZU65 1347 aa20.09■□□□□ 0.81
SF1-208ENST00000432725 LTBP3Q9NS15 1303 aa20.09■□□□□ 0.81
SF1-208ENST00000432725 HOXB7P09629 217 aa20.09■□□□□ 0.81
SF1-208ENST00000432725 GTF2E1P29083 439 aaPredicted RBP20.09■□□□□ 0.81
SF1-208ENST00000432725 KRT24Q2M2I5 525 aa20.09■□□□□ 0.81
SF1-208ENST00000432725 SOGA3Q5TF21 947 aa20.09■□□□□ 0.81
SF1-208ENST00000432725 C7orf43Q8WVR3 580 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms