RNA–Protein interactions for RNA: ENST00000432292.7

PMS1-212, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-212ENST00000432292 SRGAP3O43295 1099 aa19.71■□□□□ 0.75
PMS1-212ENST00000432292 MCM5P33992 734 aa19.71■□□□□ 0.75
PMS1-212ENST00000432292 CWF19L2Q2TBE0 894 aaKnown RBP19.71■□□□□ 0.75
PMS1-212ENST00000432292 NUTM1Q86Y26 1132 aa19.71■□□□□ 0.75
PMS1-212ENST00000432292 TRIM6-TRIM34B2RNG4 842 aa19.71■□□□□ 0.75
PMS1-212ENST00000432292 MAP3K2Q9Y2U5 619 aa19.71■□□□□ 0.75
PMS1-212ENST00000432292 MAP4K4O95819 1239 aaPredicted RBP19.7■□□□□ 0.74
PMS1-212ENST00000432292 MYL6BP14649 208 aa19.7■□□□□ 0.74
PMS1-212ENST00000432292 LRRC37A3O60309 1634 aa19.7■□□□□ 0.74
PMS1-212ENST00000432292 MST1RQ04912 1400 aa19.7■□□□□ 0.74
PMS1-212ENST00000432292 TATP17735 454 aaPredicted RBP19.7■□□□□ 0.74
PMS1-212ENST00000432292 TTC12Q9H892 705 aaPredicted RBP19.7■□□□□ 0.74
PMS1-212ENST00000432292 BEND3Q5T5X7 828 aa19.69■□□□□ 0.74
PMS1-212ENST00000432292 DBF4Q9UBU7 674 aaPredicted RBP19.69■□□□□ 0.74
PMS1-212ENST00000432292 USP54Q70EL1 1684 aa19.69■□□□□ 0.74
PMS1-212ENST00000432292 NPHP3Q7Z494 1330 aa19.69■□□□□ 0.74
PMS1-212ENST00000432292 RGPD5Q99666 1765 aa19.69■□□□□ 0.74
PMS1-212ENST00000432292 PLCB2Q00722 1185 aa19.68■□□□□ 0.74
PMS1-212ENST00000432292 GTF2E1P29083 439 aaPredicted RBP19.68■□□□□ 0.74
PMS1-212ENST00000432292 C9orf78Q9NZ63 289 aaPredicted RBP19.68■□□□□ 0.74
PMS1-212ENST00000432292 MX1P20591 662 aa19.67■□□□□ 0.74
PMS1-212ENST00000432292 ZDHHC9Q9Y397 364 aa19.66■□□□□ 0.74
PMS1-212ENST00000432292 NOL8Q76FK4 1167 aaKnown RBP19.66■□□□□ 0.74
PMS1-212ENST00000432292 UNC5CLQ8IV45 518 aa19.66■□□□□ 0.74
PMS1-212ENST00000432292 USP26Q9BXU7 913 aa19.66■□□□□ 0.74
PMS1-212ENST00000432292 ADCY9O60503 1353 aa19.66■□□□□ 0.74
PMS1-212ENST00000432292 SLIT3O75094 1523 aa19.66■□□□□ 0.74
PMS1-212ENST00000432292 FAM208AQ9UK61 1670 aaKnown RBP19.66■□□□□ 0.74
PMS1-212ENST00000432292 SOS1Q07889 1333 aaPredicted RBP19.66■□□□□ 0.74
PMS1-212ENST00000432292 VGLL3A8MV65 326 aa19.66■□□□□ 0.74
PMS1-212ENST00000432292 RABEP1Q15276 862 aa19.66■□□□□ 0.74
PMS1-212ENST00000432292 CASC1Q6TDU7 716 aa19.66■□□□□ 0.74
PMS1-212ENST00000432292 OS9Q13438 667 aaPredicted RBP19.65■□□□□ 0.74
PMS1-212ENST00000432292 CYP2E1P05181 493 aaPredicted RBP19.65■□□□□ 0.74
PMS1-212ENST00000432292 ZNF790Q6PG37 636 aa19.65■□□□□ 0.74
PMS1-212ENST00000432292 KIF3AQ9Y496 699 aa19.65■□□□□ 0.74
PMS1-212ENST00000432292 MED1Q15648 1581 aaPredicted RBP19.65■□□□□ 0.74
PMS1-212ENST00000432292 ZBTB22O15209 634 aa19.64■□□□□ 0.74
PMS1-212ENST00000432292 MAPK8IP2Q13387 824 aaPredicted RBP19.64■□□□□ 0.74
PMS1-212ENST00000432292 NOLC1Q14978 699 aaKnown RBP eCLIP19.64■□□□□ 0.74
PMS1-212ENST00000432292 ZNF496Q96IT1 587 aaPredicted RBP19.64■□□□□ 0.74
PMS1-212ENST00000432292 GDPD2Q9HCC8 539 aa19.64■□□□□ 0.74
PMS1-212ENST00000432292 USP25Q9UHP3 1055 aa19.64■□□□□ 0.74
PMS1-212ENST00000432292 HOXB7P09629 217 aa19.64■□□□□ 0.73
PMS1-212ENST00000432292 PHKG2P15735 406 aa19.64■□□□□ 0.73
PMS1-212ENST00000432292 U2AF2P26368 475 aaKnown RBP eCLIP19.64■□□□□ 0.732e-7■■■■□ 24.4
PMS1-212ENST00000432292 PA2G4Q9UQ80 394 aaKnown RBP19.64■□□□□ 0.73
PMS1-212ENST00000432292 CYP27B1O15528 508 aa19.64■□□□□ 0.73
PMS1-212ENST00000432292 BRINP3Q76B58 766 aa19.64■□□□□ 0.73
PMS1-212ENST00000432292 GTPBP4Q9BZE4 634 aaKnown RBP19.64■□□□□ 0.73
PMS1-212ENST00000432292 TSPY26PQ9H489 355 aa19.64■□□□□ 0.73
PMS1-212ENST00000432292 PRDM11Q9NQV5 511 aa19.64■□□□□ 0.73
PMS1-212ENST00000432292 ZNF335Q9H4Z2 1342 aaPredicted RBP19.63■□□□□ 0.73
PMS1-212ENST00000432292 SSH3Q8TE77 659 aa19.63■□□□□ 0.73
PMS1-212ENST00000432292 CGNQ9P2M7 1197 aaKnown RBP19.63■□□□□ 0.73
PMS1-212ENST00000432292 SPG7Q9UQ90 795 aa19.63■□□□□ 0.73
PMS1-212ENST00000432292 BCL11BQ9C0K0 894 aaPredicted RBP19.63■□□□□ 0.73
PMS1-212ENST00000432292 SLC52A2Q9HAB3 445 aa19.63■□□□□ 0.73
PMS1-212ENST00000432292 BCL2L12Q9HB09 334 aa19.63■□□□□ 0.73
PMS1-212ENST00000432292 USP16Q9Y5T5 823 aa19.63■□□□□ 0.73
PMS1-212ENST00000432292 STRCP1A6NGW2 1772 aa19.62■□□□□ 0.73
PMS1-212ENST00000432292 TRPM3Q9HCF6 1732 aaPredicted RBP19.62■□□□□ 0.73
PMS1-212ENST00000432292 PDCL2Q8N4E4 241 aa19.62■□□□□ 0.73
PMS1-212ENST00000432292 SPATA31A3Q5VYP0 1347 aa19.62■□□□□ 0.73
PMS1-212ENST00000432292 KSR2Q6VAB6 950 aa19.62■□□□□ 0.73
PMS1-212ENST00000432292 RHPN1Q8TCX5 695 aa19.62■□□□□ 0.73
PMS1-212ENST00000432292 RIC3Q7Z5B4 369 aa19.61■□□□□ 0.73
PMS1-212ENST00000432292 IFNL2Q8IZJ0 200 aa19.61■□□□□ 0.73
PMS1-212ENST00000432292 STRN4Q9NRL3 753 aa19.61■□□□□ 0.73
PMS1-212ENST00000432292 MEGF6O75095 1541 aa19.61■□□□□ 0.73
PMS1-212ENST00000432292 KIF20AO95235 890 aa19.61■□□□□ 0.73
PMS1-212ENST00000432292 TOM1L2Q6ZVM7 507 aa19.61■□□□□ 0.73
PMS1-212ENST00000432292 ERC2O15083 957 aa19.6■□□□□ 0.73
PMS1-212ENST00000432292 ZNF771Q7L3S4 317 aaPredicted RBP19.6■□□□□ 0.73
PMS1-212ENST00000432292 HMGN5P82970 282 aaKnown RBP19.6■□□□□ 0.73
PMS1-212ENST00000432292 LETM1O95202 739 aaPredicted RBP19.59■□□□□ 0.73
PMS1-212ENST00000432292 COPS6Q7L5N1 327 aa19.59■□□□□ 0.73
PMS1-212ENST00000432292 XAGE3Q8WTP9 111 aa19.59■□□□□ 0.73
PMS1-212ENST00000432292 PRIMPOLQ96LW4 560 aa19.59■□□□□ 0.73
PMS1-212ENST00000432292 OSBPL3Q9H4L5 887 aa19.59■□□□□ 0.73
PMS1-212ENST00000432292 ANO2Q9NQ90 1003 aa19.59■□□□□ 0.73
PMS1-212ENST00000432292 TTC5Q8N0Z6 440 aa19.59■□□□□ 0.73
PMS1-212ENST00000432292 CACNA1FO60840 1977 aa19.59■□□□□ 0.73
PMS1-212ENST00000432292 ST18O60284 1047 aa19.59■□□□□ 0.73
PMS1-212ENST00000432292 PDIA6Q15084 440 aa19.59■□□□□ 0.73
PMS1-212ENST00000432292 DDX54Q8TDD1 881 aaKnown RBP19.59■□□□□ 0.73
PMS1-212ENST00000432292 SALL3Q9BXA9 1300 aa19.58■□□□□ 0.73
PMS1-212ENST00000432292 KDM6AO15550 1401 aaPredicted RBP19.58■□□□□ 0.73
PMS1-212ENST00000432292 PIBF1Q8WXW3 757 aa19.58■□□□□ 0.73
PMS1-212ENST00000432292 DDX21Q9NR30 783 aaKnown RBP eCLIP19.58■□□□□ 0.73
PMS1-212ENST00000432292 HYPKQ9NX55 129 aa19.58■□□□□ 0.73
PMS1-212ENST00000432292 REC8O95072 547 aa19.58■□□□□ 0.72
PMS1-212ENST00000432292 CHMP4AQ9BY43 222 aa19.58■□□□□ 0.72
PMS1-212ENST00000432292 SIL1Q9H173 461 aa19.58■□□□□ 0.72
PMS1-212ENST00000432292 SLAIN2Q9P270 581 aa19.58■□□□□ 0.72
PMS1-212ENST00000432292 CABP4P57796 275 aa19.57■□□□□ 0.72
PMS1-212ENST00000432292 TNS3Q68CZ2 1445 aa19.57■□□□□ 0.72
PMS1-212ENST00000432292 POLA2Q14181 598 aa19.57■□□□□ 0.72
PMS1-212ENST00000432292 KLHDC4Q8TBB5 520 aa19.57■□□□□ 0.72
PMS1-212ENST00000432292 CWC22Q9HCG8 908 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms