RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 CFAP53Q96M91 514 aa19.03■□□□□ 0.64
SEC13-212ENST00000432213 OLFM4Q6UX06 510 aa19.02■□□□□ 0.64
SEC13-212ENST00000432213 CNBD1Q8NA66 436 aa19.02■□□□□ 0.64
SEC13-212ENST00000432213 ZC3H4Q9UPT8 1303 aaKnown RBP19.01■□□□□ 0.63
SEC13-212ENST00000432213 SRGNP10124 158 aa19.01■□□□□ 0.63
SEC13-212ENST00000432213 FSTL1Q12841 308 aa19.01■□□□□ 0.63
SEC13-212ENST00000432213 SLC51AQ86UW1 340 aa19.01■□□□□ 0.63
SEC13-212ENST00000432213 PDE6BP35913 854 aa19■□□□□ 0.63
SEC13-212ENST00000432213 PRPF40BQ6NWY9 871 aaKnown RBP19■□□□□ 0.63
SEC13-212ENST00000432213 KLRG1Q96E93 195 aa19■□□□□ 0.63
SEC13-212ENST00000432213 SETDB2Q96T68 719 aa19■□□□□ 0.63
SEC13-212ENST00000432213 THUMPD2Q9BTF0 503 aaKnown RBP19■□□□□ 0.63
SEC13-212ENST00000432213 POTEIP0CG38 1075 aa18.99■□□□□ 0.63
SEC13-212ENST00000432213 POTEJP0CG39 1038 aa18.99■□□□□ 0.63
SEC13-212ENST00000432213 HLFQ16534 295 aa18.99■□□□□ 0.63
SEC13-212ENST00000432213 SNRPA1P09661 255 aaKnown RBP18.98■□□□□ 0.63
SEC13-212ENST00000432213 NUDCQ9Y266 331 aa18.98■□□□□ 0.63
SEC13-212ENST00000432213 COL4A5P29400 1685 aa18.98■□□□□ 0.63
SEC13-212ENST00000432213 ABCC12Q96J65 1359 aa18.97■□□□□ 0.63
SEC13-212ENST00000432213 FAM177BA6PVY3 158 aa18.97■□□□□ 0.63
SEC13-212ENST00000432213 JMYQ8N9B5 988 aa18.97■□□□□ 0.63
SEC13-212ENST00000432213 SMC1BQ8NDV3 1235 aa18.97■□□□□ 0.63
SEC13-212ENST00000432213 C7orf43Q8WVR3 580 aa18.97■□□□□ 0.63
SEC13-212ENST00000432213 PLEKHF1Q96S99 279 aa18.97■□□□□ 0.63
SEC13-212ENST00000432213 VEGFAP15692 232 aaPredicted RBP18.96■□□□□ 0.63
SEC13-212ENST00000432213 ERFEQ4G0M1 354 aa18.96■□□□□ 0.63
SEC13-212ENST00000432213 STYK1Q6J9G0 422 aa18.96■□□□□ 0.63
SEC13-212ENST00000432213 RTF1Q92541 710 aaKnown RBP18.96■□□□□ 0.63
SEC13-212ENST00000432213 SNED1Q8TER0 1413 aa18.96■□□□□ 0.63
SEC13-212ENST00000432213 LTBP3Q9NS15 1303 aa18.96■□□□□ 0.63
SEC13-212ENST00000432213 LAMB2P55268 1798 aa18.96■□□□□ 0.63
SEC13-212ENST00000432213 ADAMTSL1Q8N6G6 1762 aa18.96■□□□□ 0.63
SEC13-212ENST00000432213 ST5P78524 1137 aa18.95■□□□□ 0.62
SEC13-212ENST00000432213 NBPF5PQ86XG9 351 aaPredicted RBP18.95■□□□□ 0.62
SEC13-212ENST00000432213 MASTLQ96GX5 879 aa18.95■□□□□ 0.62
SEC13-212ENST00000432213 TAOK3Q9H2K8 898 aa18.95■□□□□ 0.62
SEC13-212ENST00000432213 SCN4AP35499 1836 aa18.95■□□□□ 0.62
SEC13-212ENST00000432213 PCNTO95613 3336 aa18.95■□□□□ 0.62
SEC13-212ENST00000432213 DDNO94850 711 aaPredicted RBP18.94■□□□□ 0.62
SEC13-212ENST00000432213 NIP7Q9Y221 180 aaKnown RBP eCLIP18.94■□□□□ 0.62
SEC13-212ENST00000432213 TAF7Q15545 349 aaPredicted RBP18.93■□□□□ 0.62
SEC13-212ENST00000432213 CNKSR1Q969H4 720 aa18.93■□□□□ 0.62
SEC13-212ENST00000432213 LTBP1Q14766 1721 aa18.93■□□□□ 0.62
SEC13-212ENST00000432213 ANKRD36CQ5JPF3 1778 aa18.92■□□□□ 0.62
SEC13-212ENST00000432213 KLRG2A4D1S0 409 aaPredicted RBP18.92■□□□□ 0.62
SEC13-212ENST00000432213 NPHP1O15259 732 aa18.92■□□□□ 0.62
SEC13-212ENST00000432213 HTATSF1O43719 755 aaKnown RBP18.92■□□□□ 0.62
SEC13-212ENST00000432213 COL13A1Q5TAT6 717 aaPredicted RBP18.92■□□□□ 0.62
SEC13-212ENST00000432213 CLEC4GQ6UXB4 293 aa18.92■□□□□ 0.62
SEC13-212ENST00000432213 TTLL7Q6ZT98 887 aa18.92■□□□□ 0.62
SEC13-212ENST00000432213 NGEFQ8N5V2 710 aa18.92■□□□□ 0.62
SEC13-212ENST00000432213 ZNF541Q9H0D2 1346 aa18.92■□□□□ 0.62
SEC13-212ENST00000432213 PDZRN3Q9UPQ7 1066 aa18.91■□□□□ 0.62
SEC13-212ENST00000432213 UBN2Q6ZU65 1347 aa18.91■□□□□ 0.62
SEC13-212ENST00000432213 TAF1P21675 1872 aa18.9■□□□□ 0.62
SEC13-212ENST00000432213 EIF4A1P60842 406 aaKnown RBP18.9■□□□□ 0.62
SEC13-212ENST00000432213 NPM2Q86SE8 214 aaKnown RBP18.9■□□□□ 0.62
SEC13-212ENST00000432213 NUTM1Q86Y26 1132 aa18.9■□□□□ 0.62
SEC13-212ENST00000432213 ZNF277Q9NRM2 450 aaPredicted RBP18.9■□□□□ 0.62
SEC13-212ENST00000432213 NPR1P16066 1061 aa18.88■□□□□ 0.61
SEC13-212ENST00000432213 NFE2L2Q16236 605 aa18.88■□□□□ 0.61
SEC13-212ENST00000432213 C3orf67Q6ZVT6 689 aa18.88■□□□□ 0.61
SEC13-212ENST00000432213 ZNF652Q9Y2D9 606 aa18.88■□□□□ 0.61
SEC13-212ENST00000432213 RRP7AQ9Y3A4 280 aaKnown RBP18.87■□□□□ 0.61
SEC13-212ENST00000432213 MAP3K15Q6ZN16 1313 aa18.86■□□□□ 0.61
SEC13-212ENST00000432213 MYL6BP14649 208 aa18.86■□□□□ 0.61
SEC13-212ENST00000432213 GPTP24298 496 aa18.86■□□□□ 0.61
SEC13-212ENST00000432213 CCDC93Q567U6 631 aa18.86■□□□□ 0.61
SEC13-212ENST00000432213 DPY19L2Q6NUT2 758 aa18.86■□□□□ 0.61
SEC13-212ENST00000432213 LRP10Q7Z4F1 713 aa18.86■□□□□ 0.61
SEC13-212ENST00000432213 ZBTB3Q9H5J0 574 aa18.86■□□□□ 0.61
SEC13-212ENST00000432213 FKBP4Q02790 459 aaKnown RBP eCLIP18.85■□□□□ 0.61
SEC13-212ENST00000432213 PROSER3Q2NL68 480 aa18.85■□□□□ 0.61
SEC13-212ENST00000432213 TPTE2Q6XPS3 522 aa18.85■□□□□ 0.61
SEC13-212ENST00000432213 ANXA1P04083 346 aa18.84■□□□□ 0.61
SEC13-212ENST00000432213 CRY2Q49AN0 593 aa18.84■□□□□ 0.61
SEC13-212ENST00000432213 SUSD4Q5VX71 490 aa18.84■□□□□ 0.61
SEC13-212ENST00000432213 CHADLQ6NUI6 762 aa18.84■□□□□ 0.61
SEC13-212ENST00000432213 COL4A1P02462 1669 aa18.84■□□□□ 0.61
SEC13-212ENST00000432213 RIC1Q4ADV7 1423 aa18.83■□□□□ 0.61
SEC13-212ENST00000432213 RGL2O15211 777 aa18.83■□□□□ 0.6
SEC13-212ENST00000432213 L3MBTL3Q96JM7 780 aaPredicted RBP18.83■□□□□ 0.6
SEC13-212ENST00000432213 HSPA1AP0DMV8 641 aaKnown RBP18.82■□□□□ 0.6
SEC13-212ENST00000432213 HSPA1BP0DMV9 641 aaKnown RBP18.82■□□□□ 0.6
SEC13-212ENST00000432213 PDIA6Q15084 440 aa18.82■□□□□ 0.6
SEC13-212ENST00000432213 SOGA3Q5TF21 947 aa18.82■□□□□ 0.6
SEC13-212ENST00000432213 TAF1DQ9H5J8 278 aaPredicted RBP18.82■□□□□ 0.6
SEC13-212ENST00000432213 DDX60Q8IY21 1712 aaKnown RBP18.82■□□□□ 0.6
SEC13-212ENST00000432213 PASKQ96RG2 1323 aa18.81■□□□□ 0.6
SEC13-212ENST00000432213 ERVV-1B6SEH8 477 aa18.81■□□□□ 0.6
SEC13-212ENST00000432213 NTSR2O95665 410 aa18.81■□□□□ 0.6
SEC13-212ENST00000432213 ZNF34Q8IZ26 560 aa18.81■□□□□ 0.6
SEC13-212ENST00000432213 SYNE4Q8N205 404 aa18.81■□□□□ 0.6
SEC13-212ENST00000432213 MKRN1Q9UHC7 482 aaKnown RBP18.81■□□□□ 0.6
SEC13-212ENST00000432213 RNF123Q5XPI4 1314 aa18.8■□□□□ 0.6
SEC13-212ENST00000432213 IARSP41252 1262 aaKnown RBP18.8■□□□□ 0.6
SEC13-212ENST00000432213 KRT24Q2M2I5 525 aa18.8■□□□□ 0.6
SEC13-212ENST00000432213 IBTKQ9P2D0 1353 aaPredicted RBP18.8■□□□□ 0.6
SEC13-212ENST00000432213 FZD9O00144 591 aa18.79■□□□□ 0.6
SEC13-212ENST00000432213 PNISRQ8TF01 805 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms