RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 CCDC196A0A1B0GTZ2 297 aa13.52□□□□□ -0.25
RIMKLA-202ENST00000431473 NOP2P46087 812 aaKnown RBP13.52□□□□□ -0.25
RIMKLA-202ENST00000431473 MTIF2P46199 727 aaKnown RBP13.52□□□□□ -0.25
RIMKLA-202ENST00000431473 ANO6Q4KMQ2 910 aa13.52□□□□□ -0.25
RIMKLA-202ENST00000431473 UBE2Q2Q8WVN8 375 aa13.52□□□□□ -0.25
RIMKLA-202ENST00000431473 CDK13Q14004 1512 aaKnown RBP13.52□□□□□ -0.25
RIMKLA-202ENST00000431473 MYD88Q99836 296 aa13.52□□□□□ -0.25
RIMKLA-202ENST00000431473 AKAP2Q9Y2D5 859 aa13.52□□□□□ -0.25
RIMKLA-202ENST00000431473 PRIMPOLQ96LW4 560 aa13.52□□□□□ -0.25
RIMKLA-202ENST00000431473 NAA15Q9BXJ9 866 aaKnown RBP13.52□□□□□ -0.25
RIMKLA-202ENST00000431473 BMS1Q14692 1282 aaKnown RBP13.51□□□□□ -0.25
RIMKLA-202ENST00000431473 SPTY2D1Q68D10 685 aaPredicted RBP13.51□□□□□ -0.25
RIMKLA-202ENST00000431473 STAMBPO95630 424 aa13.51□□□□□ -0.25
RIMKLA-202ENST00000431473 SLC4A8Q2Y0W8 1093 aa13.51□□□□□ -0.25
RIMKLA-202ENST00000431473 KRT222Q8N1A0 295 aa13.51□□□□□ -0.25
RIMKLA-202ENST00000431473 LRSAM1Q6UWE0 723 aa13.51□□□□□ -0.25
RIMKLA-202ENST00000431473 HOOK3Q86VS8 718 aa13.51□□□□□ -0.25
RIMKLA-202ENST00000431473 RAB11FIP4Q86YS3 637 aa13.51□□□□□ -0.25
RIMKLA-202ENST00000431473 TBC1D32Q96NH3 1257 aa13.51□□□□□ -0.25
RIMKLA-202ENST00000431473 CNPY2Q9Y2B0 182 aa13.51□□□□□ -0.25
RIMKLA-202ENST00000431473 IGHDP01880 384 aa13.51□□□□□ -0.25
RIMKLA-202ENST00000431473 MCM6Q14566 821 aa13.51□□□□□ -0.25
RIMKLA-202ENST00000431473 TAOK3Q9H2K8 898 aa13.51□□□□□ -0.25
RIMKLA-202ENST00000431473 GTF2A1P52655 376 aaPredicted RBP13.51□□□□□ -0.25
RIMKLA-202ENST00000431473 CTNNA2P26232 953 aa13.51□□□□□ -0.25
RIMKLA-202ENST00000431473 PHAXQ9H814 394 aaKnown RBP13.51□□□□□ -0.25
RIMKLA-202ENST00000431473 HSF2BPO75031 334 aa13.5□□□□□ -0.25
RIMKLA-202ENST00000431473 DNAAF4Q8WXU2 420 aa13.5□□□□□ -0.25
RIMKLA-202ENST00000431473 NLRP5P59047 1200 aa13.5□□□□□ -0.25
RIMKLA-202ENST00000431473 KLHL40Q2TBA0 621 aa13.5□□□□□ -0.25
RIMKLA-202ENST00000431473 CCDC150Q8NCX0 1101 aa13.5□□□□□ -0.25
RIMKLA-202ENST00000431473 PHF23Q9BUL5 403 aaPredicted RBP13.5□□□□□ -0.25
RIMKLA-202ENST00000431473 ANKIB1Q9P2G1 1089 aa13.5□□□□□ -0.25
RIMKLA-202ENST00000431473 IFIT3O14879 490 aaKnown RBP13.49□□□□□ -0.25
RIMKLA-202ENST00000431473 MYO1BO43795 1136 aa13.49□□□□□ -0.25
RIMKLA-202ENST00000431473 CHMP4BP1P59074 171 aa13.49□□□□□ -0.25
RIMKLA-202ENST00000431473 CTCFLQ8NI51 663 aaPredicted RBP13.49□□□□□ -0.25
RIMKLA-202ENST00000431473 TRIM21P19474 475 aaKnown RBP13.49□□□□□ -0.25
RIMKLA-202ENST00000431473 UBASH3AP57075 661 aa13.49□□□□□ -0.25
RIMKLA-202ENST00000431473 USHBP1Q8N6Y0 703 aa13.49□□□□□ -0.25
RIMKLA-202ENST00000431473 TMEM266Q2M3C6 531 aa13.49□□□□□ -0.25
RIMKLA-202ENST00000431473 KIF14Q15058 1648 aa13.49□□□□□ -0.25
RIMKLA-202ENST00000431473 CCDC96Q2M329 555 aa13.49□□□□□ -0.25
RIMKLA-202ENST00000431473 ZNF287Q9HBT7 754 aa13.49□□□□□ -0.25
RIMKLA-202ENST00000431473 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.49□□□□□ -0.25
RIMKLA-202ENST00000431473 V9GYY5 206 aaPredicted RBP13.49□□□□□ -0.25
RIMKLA-202ENST00000431473 GOLGA6L9A6NEM1 432 aa13.49□□□□□ -0.25
RIMKLA-202ENST00000431473 TNIP1Q15025 636 aa13.49□□□□□ -0.25
RIMKLA-202ENST00000431473 RSPH14Q9UHP6 348 aa13.49□□□□□ -0.25
RIMKLA-202ENST00000431473 PTCD1O75127 700 aaKnown RBP13.49□□□□□ -0.25
RIMKLA-202ENST00000431473 GIGYF2Q6Y7W6 1299 aaKnown RBP13.49□□□□□ -0.25
RIMKLA-202ENST00000431473 TAF7Q15545 349 aaPredicted RBP13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 DRC1Q96MC2 740 aa13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 ARFGAP3Q9NP61 516 aa13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 ATAD2Q6PL18 1390 aa13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 NOLC1Q14978 699 aaKnown RBP eCLIP13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 CATIPQ7Z7H3 387 aa13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 MICU3Q86XE3 530 aa13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 CEP112Q8N8E3 955 aa13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 GOLGA8AA7E2F4 631 aa13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 SPECC1LQ69YQ0 1117 aa13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 TRMT1LQ7Z2T5 733 aaKnown RBP13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 PAIP2Q9BPZ3 127 aaKnown RBP13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 HAND2P61296 217 aa13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 CAVIN4Q5BKX8 364 aa13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 TCERG1LQ5VWI1 586 aa13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 CCDC171Q6TFL3 1326 aa13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 PRG4Q92954 1404 aaPredicted RBP13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 RAB34Q9BZG1 259 aa13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 PROSER2Q86WR7 435 aaPredicted RBP13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 IQCA1Q86XH1 822 aa13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 XRCC6P12956 609 aaKnown RBP eCLIP13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 USP48Q86UV5 1035 aa13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 EVI5LQ96CN4 794 aa13.48□□□□□ -0.25
RIMKLA-202ENST00000431473 DZIP1Q86YF9 867 aaKnown RBP13.47□□□□□ -0.25
RIMKLA-202ENST00000431473 A0A087WZG4 1122 aa13.47□□□□□ -0.25
RIMKLA-202ENST00000431473 CCDC194A0A1B0GVG4 234 aa13.47□□□□□ -0.25
RIMKLA-202ENST00000431473 GOLIM4O00461 696 aa13.47□□□□□ -0.25
RIMKLA-202ENST00000431473 MMRN2Q9H8L6 949 aa13.47□□□□□ -0.25
RIMKLA-202ENST00000431473 BMP2KLQ5H9B9 411 aa13.47□□□□□ -0.25
RIMKLA-202ENST00000431473 NUTM2BA6NNL0 878 aaPredicted RBP13.47□□□□□ -0.25
RIMKLA-202ENST00000431473 NUTM2EB1AL46 878 aaPredicted RBP13.47□□□□□ -0.25
RIMKLA-202ENST00000431473 SKILP12757 684 aa13.47□□□□□ -0.25
RIMKLA-202ENST00000431473 NUTM2AQ8IVF1 878 aaPredicted RBP13.47□□□□□ -0.25
RIMKLA-202ENST00000431473 TTC22Q5TAA0 569 aa13.46□□□□□ -0.25
RIMKLA-202ENST00000431473 STARD3NLO95772 234 aa13.46□□□□□ -0.25
RIMKLA-202ENST00000431473 MAP3K12Q12852 859 aa13.46□□□□□ -0.25
RIMKLA-202ENST00000431473 IFIT5Q13325 482 aaKnown RBP13.46□□□□□ -0.25
RIMKLA-202ENST00000431473 NCAPD3P42695 1498 aa13.46□□□□□ -0.25
RIMKLA-202ENST00000431473 TMEM67Q5HYA8 995 aa13.46□□□□□ -0.25
RIMKLA-202ENST00000431473 A0A1W2PRG0 241 aa13.46□□□□□ -0.25
RIMKLA-202ENST00000431473 CCDC40Q4G0X9 1142 aa13.46□□□□□ -0.26
RIMKLA-202ENST00000431473 NECAB1Q8N987 351 aa13.46□□□□□ -0.26
RIMKLA-202ENST00000431473 PSMD1Q99460 953 aa13.46□□□□□ -0.26
RIMKLA-202ENST00000431473 FSD2A1L4K1 749 aa13.46□□□□□ -0.26
RIMKLA-202ENST00000431473 ZSCAN22P10073 491 aaPredicted RBP13.46□□□□□ -0.26
RIMKLA-202ENST00000431473 CRACR2BQ8N4Y2 399 aaPredicted RBP13.46□□□□□ -0.26
RIMKLA-202ENST00000431473 DNAI1Q9UI46 699 aa13.46□□□□□ -0.26
RIMKLA-202ENST00000431473 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
RIMKLA-202ENST00000431473 PUS7Q96PZ0 661 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms