RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 KRT24Q2M2I5 525 aa15.5■□□□□ 0.07
TRERNA1-201ENST00000431460 DALRD3Q5D0E6 543 aaKnown RBP15.5■□□□□ 0.07
TRERNA1-201ENST00000431460 PRR5LQ6MZQ0 368 aa15.5■□□□□ 0.07
TRERNA1-201ENST00000431460 C2CD5Q86YS7 1000 aa15.5■□□□□ 0.07
TRERNA1-201ENST00000431460 CNBD1Q8NA66 436 aa15.5■□□□□ 0.07
TRERNA1-201ENST00000431460 BABAM1Q9NWV8 329 aa15.5■□□□□ 0.07
TRERNA1-201ENST00000431460 BRCA1P38398 1863 aaKnown RBP15.5■□□□□ 0.07
TRERNA1-201ENST00000431460 ANXA1P04083 346 aa15.49■□□□□ 0.07
TRERNA1-201ENST00000431460 CALD1Q05682 793 aaKnown RBP15.49■□□□□ 0.07
TRERNA1-201ENST00000431460 KIF6Q6ZMV9 814 aa15.49■□□□□ 0.07
TRERNA1-201ENST00000431460 TTLL7Q6ZT98 887 aa15.49■□□□□ 0.07
TRERNA1-201ENST00000431460 ZNF526Q8TF50 670 aaPredicted RBP15.49■□□□□ 0.07
TRERNA1-201ENST00000431460 NIP7Q9Y221 180 aaKnown RBP eCLIP15.49■□□□□ 0.07
TRERNA1-201ENST00000431460 HLFQ16534 295 aa15.48■□□□□ 0.07
TRERNA1-201ENST00000431460 NBPF5PQ86XG9 351 aaPredicted RBP15.48■□□□□ 0.07
TRERNA1-201ENST00000431460 WWC1Q8IX03 1113 aa15.48■□□□□ 0.07
TRERNA1-201ENST00000431460 ZBTB3Q9H5J0 574 aa15.48■□□□□ 0.07
TRERNA1-201ENST00000431460 ATP10DQ9P241 1426 aa15.48■□□□□ 0.07
TRERNA1-201ENST00000431460 H0YIN7 160 aa15.47■□□□□ 0.07
TRERNA1-201ENST00000431460 ST5P78524 1137 aa15.47■□□□□ 0.07
TRERNA1-201ENST00000431460 ANKRD31Q8N7Z5 1873 aa15.46■□□□□ 0.07
TRERNA1-201ENST00000431460 COL11A2P13942 1736 aaPredicted RBP15.46■□□□□ 0.07
TRERNA1-201ENST00000431460 CHL1O00533 1208 aa15.46■□□□□ 0.07
TRERNA1-201ENST00000431460 PROSER3Q2NL68 480 aa15.46■□□□□ 0.07
TRERNA1-201ENST00000431460 CLEC4GQ6UXB4 293 aa15.46■□□□□ 0.07
TRERNA1-201ENST00000431460 ZNF622Q969S3 477 aaKnown RBP eCLIP15.46■□□□□ 0.07
TRERNA1-201ENST00000431460 CFAP44Q96MT7 982 aa15.46■□□□□ 0.07
TRERNA1-201ENST00000431460 ZNF219Q9P2Y4 722 aaPredicted RBP15.46■□□□□ 0.07
TRERNA1-201ENST00000431460 MAP3K15Q6ZN16 1313 aa15.45■□□□□ 0.06
TRERNA1-201ENST00000431460 GPTP24298 496 aa15.45■□□□□ 0.06
TRERNA1-201ENST00000431460 WDR63Q8IWG1 891 aa15.45■□□□□ 0.06
TRERNA1-201ENST00000431460 IL16Q14005 1332 aa15.44■□□□□ 0.06
TRERNA1-201ENST00000431460 DLEC1Q9Y238 1755 aa15.44■□□□□ 0.06
TRERNA1-201ENST00000431460 ZNF853P0CG23 659 aa15.44■□□□□ 0.06
TRERNA1-201ENST00000431460 PDE6BP35913 854 aa15.44■□□□□ 0.06
TRERNA1-201ENST00000431460 GNAI1P63096 354 aa15.44■□□□□ 0.06
TRERNA1-201ENST00000431460 AIMP1Q12904 312 aaKnown RBP15.44■□□□□ 0.06
TRERNA1-201ENST00000431460 TTLL6Q8N841 843 aa15.44■□□□□ 0.06
TRERNA1-201ENST00000431460 BRIP1Q9BX63 1249 aa15.44■□□□□ 0.06
TRERNA1-201ENST00000431460 MBIPQ9NS73 344 aa15.44■□□□□ 0.06
TRERNA1-201ENST00000431460 IFT57Q9NWB7 429 aa15.44■□□□□ 0.06
TRERNA1-201ENST00000431460 SALL2Q9Y467 1007 aaPredicted RBP15.44■□□□□ 0.06
TRERNA1-201ENST00000431460 ARFGEF1Q9Y6D6 1849 aa15.44■□□□□ 0.06
TRERNA1-201ENST00000431460 ERBB4Q15303 1308 aa15.43■□□□□ 0.06
TRERNA1-201ENST00000431460 GTF2E1P29083 439 aaPredicted RBP15.43■□□□□ 0.06
TRERNA1-201ENST00000431460 RASSF7Q02833 373 aa15.43■□□□□ 0.06
TRERNA1-201ENST00000431460 PDIA6Q15084 440 aa15.43■□□□□ 0.06
TRERNA1-201ENST00000431460 ADCY9O60503 1353 aa15.43■□□□□ 0.06
TRERNA1-201ENST00000431460 HDGFL1Q5TGJ6 251 aa15.42■□□□□ 0.06
TRERNA1-201ENST00000431460 NUTM1Q86Y26 1132 aa15.42■□□□□ 0.06
TRERNA1-201ENST00000431460 CHPF2Q9P2E5 772 aa15.42■□□□□ 0.06
TRERNA1-201ENST00000431460 ZNF521Q96K83 1311 aa15.42■□□□□ 0.06
TRERNA1-201ENST00000431460 ERVV-1B6SEH8 477 aa15.41■□□□□ 0.06
TRERNA1-201ENST00000431460 ELL2O00472 640 aaPredicted RBP15.41■□□□□ 0.06
TRERNA1-201ENST00000431460 C9orf131Q5VYM1 1079 aa15.41■□□□□ 0.06
TRERNA1-201ENST00000431460 TPTE2Q6XPS3 522 aa15.41■□□□□ 0.06
TRERNA1-201ENST00000431460 XAGE3Q8WTP9 111 aa15.41■□□□□ 0.06
TRERNA1-201ENST00000431460 GPBP1L1Q9HC44 474 aaPredicted RBP15.41■□□□□ 0.06
TRERNA1-201ENST00000431460 UBN2Q6ZU65 1347 aa15.41■□□□□ 0.06
TRERNA1-201ENST00000431460 ABCC12Q96J65 1359 aa15.4■□□□□ 0.06
TRERNA1-201ENST00000431460 DUSP27Q5VZP5 1158 aa15.4■□□□□ 0.06
TRERNA1-201ENST00000431460 COPS6Q7L5N1 327 aa15.4■□□□□ 0.06
TRERNA1-201ENST00000431460 LRP10Q7Z4F1 713 aa15.4■□□□□ 0.06
TRERNA1-201ENST00000431460 ZNF428Q96B54 188 aa15.4■□□□□ 0.06
TRERNA1-201ENST00000431460 RNF181Q9P0P0 153 aa15.4■□□□□ 0.06
TRERNA1-201ENST00000431460 NUP98P52948 1817 aa15.4■□□□□ 0.06
TRERNA1-201ENST00000431460 CACNA1SQ13698 1873 aa15.4■□□□□ 0.06
TRERNA1-201ENST00000431460 TNRC6CQ9HCJ0 1690 aaKnown RBP15.39■□□□□ 0.05
TRERNA1-201ENST00000431460 RGL2O15211 777 aa15.39■□□□□ 0.05
TRERNA1-201ENST00000431460 C21orf2O43822 256 aa15.39■□□□□ 0.05
TRERNA1-201ENST00000431460 ERFEQ4G0M1 354 aa15.39■□□□□ 0.05
TRERNA1-201ENST00000431460 SRGNP10124 158 aa15.38■□□□□ 0.05
TRERNA1-201ENST00000431460 SUSD4Q5VX71 490 aa15.38■□□□□ 0.05
TRERNA1-201ENST00000431460 PRPF40BQ6NWY9 871 aaKnown RBP15.38■□□□□ 0.05
TRERNA1-201ENST00000431460 GIGYF2Q6Y7W6 1299 aaKnown RBP15.38■□□□□ 0.05
TRERNA1-201ENST00000431460 TSR2Q969E8 191 aaKnown RBP15.38■□□□□ 0.05
TRERNA1-201ENST00000431460 NYXQ9GZU5 481 aa15.38■□□□□ 0.05
TRERNA1-201ENST00000431460 DDX21Q9NR30 783 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRERNA1-201ENST00000431460 PDZRN3Q9UPQ7 1066 aa15.38■□□□□ 0.05
TRERNA1-201ENST00000431460 STYK1Q6J9G0 422 aa15.37■□□□□ 0.05
TRERNA1-201ENST00000431460 MASTLQ96GX5 879 aa15.37■□□□□ 0.05
TRERNA1-201ENST00000431460 HOXB7P09629 217 aa15.36■□□□□ 0.05
TRERNA1-201ENST00000431460 HNRNPUQ00839 825 aaKnown RBP eCLIP15.36■□□□□ 0.05
TRERNA1-201ENST00000431460 GOLGA2Q08379 1002 aa15.36■□□□□ 0.05
TRERNA1-201ENST00000431460 ZNF34Q8IZ26 560 aa15.36■□□□□ 0.05
TRERNA1-201ENST00000431460 C8orf58Q8NAV2 365 aa15.36■□□□□ 0.05
TRERNA1-201ENST00000431460 CNKSR1Q969H4 720 aa15.36■□□□□ 0.05
TRERNA1-201ENST00000431460 NFKBIEO00221 500 aa15.35■□□□□ 0.05
TRERNA1-201ENST00000431460 NTSR2O95665 410 aa15.35■□□□□ 0.05
TRERNA1-201ENST00000431460 NPR1P16066 1061 aa15.35■□□□□ 0.05
TRERNA1-201ENST00000431460 MYH16Q9H6N6 1097 aa15.35■□□□□ 0.05
TRERNA1-201ENST00000431460 SPINK5Q9NQ38 1064 aaPredicted RBP15.35■□□□□ 0.05
TRERNA1-201ENST00000431460 DBF4Q9UBU7 674 aaPredicted RBP15.35■□□□□ 0.05
TRERNA1-201ENST00000431460 SLX4Q8IY92 1834 aa15.34■□□□□ 0.05
TRERNA1-201ENST00000431460 PRELPP51888 382 aa15.34■□□□□ 0.05
TRERNA1-201ENST00000431460 C1QTNF8P60827 252 aa15.34■□□□□ 0.05
TRERNA1-201ENST00000431460 PPP1R42Q7Z4L9 355 aa15.34■□□□□ 0.05
TRERNA1-201ENST00000431460 IBTKQ9P2D0 1353 aaPredicted RBP15.34■□□□□ 0.05
TRERNA1-201ENST00000431460 ANKRD36CQ5JPF3 1778 aa15.34■□□□□ 0.05
TRERNA1-201ENST00000431460 E9PSI1 815 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms