RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 SERPINB2P05120 415 aa22.51■■□□□ 1.19
CTDSP1-203ENST00000431127 PDIA6Q15084 440 aa22.51■■□□□ 1.19
CTDSP1-203ENST00000431127 DDX21Q9NR30 783 aaKnown RBP eCLIP22.51■■□□□ 1.19
CTDSP1-203ENST00000431127 CARMIL3Q8ND23 1372 aa22.5■■□□□ 1.19
CTDSP1-203ENST00000431127 NECTIN2Q92692 538 aa22.5■■□□□ 1.19
CTDSP1-203ENST00000431127 DBF4Q9UBU7 674 aaPredicted RBP22.49■■□□□ 1.19
CTDSP1-203ENST00000431127 MAP3K15Q6ZN16 1313 aa22.49■■□□□ 1.19
CTDSP1-203ENST00000431127 LRP10Q7Z4F1 713 aa22.48■■□□□ 1.19
CTDSP1-203ENST00000431127 TSR2Q969E8 191 aaKnown RBP22.48■■□□□ 1.19
CTDSP1-203ENST00000431127 PROSER3Q2NL68 480 aa22.47■■□□□ 1.19
CTDSP1-203ENST00000431127 TTLL7Q6ZT98 887 aa22.47■■□□□ 1.19
CTDSP1-203ENST00000431127 MIER1Q8N108 512 aa22.47■■□□□ 1.19
CTDSP1-203ENST00000431127 C8orf58Q8NAV2 365 aa22.47■■□□□ 1.19
CTDSP1-203ENST00000431127 CHPF2Q9P2E5 772 aa22.47■■□□□ 1.19
CTDSP1-203ENST00000431127 BCORQ6W2J9 1755 aa22.47■■□□□ 1.19
CTDSP1-203ENST00000431127 ELL2O00472 640 aaPredicted RBP22.46■■□□□ 1.19
CTDSP1-203ENST00000431127 HLFQ16534 295 aa22.46■■□□□ 1.19
CTDSP1-203ENST00000431127 KIF13BQ9NQT8 1826 aa22.45■■□□□ 1.19
CTDSP1-203ENST00000431127 ANXA1P04083 346 aa22.45■■□□□ 1.18
CTDSP1-203ENST00000431127 HYPKQ9NX55 129 aa22.45■■□□□ 1.18
CTDSP1-203ENST00000431127 NIP7Q9Y221 180 aaKnown RBP eCLIP22.45■■□□□ 1.18
CTDSP1-203ENST00000431127 PXDNLA1KZ92 1463 aa22.44■■□□□ 1.18
CTDSP1-203ENST00000431127 NPHP1O15259 732 aa22.44■■□□□ 1.18
CTDSP1-203ENST00000431127 C1QTNF8P60827 252 aa22.44■■□□□ 1.18
CTDSP1-203ENST00000431127 CCDC30Q5VVM6 783 aa22.44■■□□□ 1.18
CTDSP1-203ENST00000431127 COPS6Q7L5N1 327 aa22.44■■□□□ 1.18
CTDSP1-203ENST00000431127 CNBD1Q8NA66 436 aa22.44■■□□□ 1.18
CTDSP1-203ENST00000431127 ZBTB3Q9H5J0 574 aa22.44■■□□□ 1.18
CTDSP1-203ENST00000431127 MYH16Q9H6N6 1097 aa22.44■■□□□ 1.18
CTDSP1-203ENST00000431127 FANCIQ9NVI1 1328 aa22.43■■□□□ 1.18
CTDSP1-203ENST00000431127 A0A0G2JLW4 131 aa22.43■■□□□ 1.18
CTDSP1-203ENST00000431127 GOLGA2Q08379 1002 aa22.43■■□□□ 1.18
CTDSP1-203ENST00000431127 GIGYF2Q6Y7W6 1299 aaKnown RBP22.43■■□□□ 1.18
CTDSP1-203ENST00000431127 NBPF5PQ86XG9 351 aaPredicted RBP22.43■■□□□ 1.18
CTDSP1-203ENST00000431127 XAGE3Q8WTP9 111 aa22.43■■□□□ 1.18
CTDSP1-203ENST00000431127 NRXN2Q9P2S2 1712 aa22.43■■□□□ 1.18
CTDSP1-203ENST00000431127 DPEP1P16444 411 aa22.42■■□□□ 1.18
CTDSP1-203ENST00000431127 AIMP1Q12904 312 aaKnown RBP22.42■■□□□ 1.18
CTDSP1-203ENST00000431127 TPTE2Q6XPS3 522 aa22.42■■□□□ 1.18
CTDSP1-203ENST00000431127 ATP10DQ9P241 1426 aa22.41■■□□□ 1.18
CTDSP1-203ENST00000431127 ZNF521Q96K83 1311 aa22.41■■□□□ 1.18
CTDSP1-203ENST00000431127 ST5P78524 1137 aa22.41■■□□□ 1.18
CTDSP1-203ENST00000431127 TWISTNBQ3B726 338 aaPredicted RBP22.41■■□□□ 1.18
CTDSP1-203ENST00000431127 PRR5LQ6MZQ0 368 aa22.41■■□□□ 1.18
CTDSP1-203ENST00000431127 TSPYL6Q8N831 410 aa22.41■■□□□ 1.18
CTDSP1-203ENST00000431127 BRIP1Q9BX63 1249 aa22.41■■□□□ 1.18
CTDSP1-203ENST00000431127 PDZRN3Q9UPQ7 1066 aa22.41■■□□□ 1.18
CTDSP1-203ENST00000431127 AFDNP55196 1824 aaKnown RBP22.4■■□□□ 1.18
CTDSP1-203ENST00000431127 PDE6BP35913 854 aa22.39■■□□□ 1.17
CTDSP1-203ENST00000431127 HSP90AB3PQ58FF7 597 aa22.39■■□□□ 1.17
CTDSP1-203ENST00000431127 NYXQ9GZU5 481 aa22.39■■□□□ 1.17
CTDSP1-203ENST00000431127 PIM2Q9P1W9 311 aa22.39■■□□□ 1.17
CTDSP1-203ENST00000431127 KCNA3P22001 575 aa22.38■■□□□ 1.17
CTDSP1-203ENST00000431127 ZNF34Q8IZ26 560 aa22.38■■□□□ 1.17
CTDSP1-203ENST00000431127 PLBD2Q8NHP8 589 aa22.38■■□□□ 1.17
CTDSP1-203ENST00000431127 STK31Q9BXU1 1019 aa22.38■■□□□ 1.17
CTDSP1-203ENST00000431127 H0YIN7 160 aa22.37■■□□□ 1.17
CTDSP1-203ENST00000431127 GTF2E1P29083 439 aaPredicted RBP22.37■■□□□ 1.17
CTDSP1-203ENST00000431127 PARP10Q53GL7 1025 aa22.37■■□□□ 1.17
CTDSP1-203ENST00000431127 ANKRD13DQ6ZTN6 518 aa22.37■■□□□ 1.17
CTDSP1-203ENST00000431127 SPINK5Q9NQ38 1064 aaPredicted RBP22.37■■□□□ 1.17
CTDSP1-203ENST00000431127 GPTP24298 496 aa22.36■■□□□ 1.17
CTDSP1-203ENST00000431127 CHRNA5P30532 468 aa22.36■■□□□ 1.17
CTDSP1-203ENST00000431127 C2CD5Q86YS7 1000 aa22.36■■□□□ 1.17
CTDSP1-203ENST00000431127 WWC3Q9ULE0 1092 aa22.36■■□□□ 1.17
CTDSP1-203ENST00000431127 KIAA1551Q9HCM1 1747 aa22.35■■□□□ 1.17
CTDSP1-203ENST00000431127 FAM177BA6PVY3 158 aa22.35■■□□□ 1.17
CTDSP1-203ENST00000431127 EXOSC9Q06265 439 aaKnown RBP22.35■■□□□ 1.17
CTDSP1-203ENST00000431127 PPP1R42Q7Z4L9 355 aa22.35■■□□□ 1.17
CTDSP1-203ENST00000431127 BCS1LQ9Y276 419 aa22.35■■□□□ 1.17
CTDSP1-203ENST00000431127 NUP98P52948 1817 aa22.35■■□□□ 1.17
CTDSP1-203ENST00000431127 IBTKQ9P2D0 1353 aaPredicted RBP22.35■■□□□ 1.17
CTDSP1-203ENST00000431127 N4BP2Q86UW6 1770 aaPredicted RBP22.35■■□□□ 1.17
CTDSP1-203ENST00000431127 E9PSI1 815 aa22.34■■□□□ 1.17
CTDSP1-203ENST00000431127 TCIRG1Q13488 830 aa22.34■■□□□ 1.17
CTDSP1-203ENST00000431127 DALRD3Q5D0E6 543 aaKnown RBP22.34■■□□□ 1.17
CTDSP1-203ENST00000431127 CCDC24Q8N4L8 307 aa22.34■■□□□ 1.17
CTDSP1-203ENST00000431127 UBN2Q6ZU65 1347 aa22.33■■□□□ 1.17
CTDSP1-203ENST00000431127 VAMP4O75379 141 aa22.33■■□□□ 1.17
CTDSP1-203ENST00000431127 DDX58O95786 925 aaKnown RBP22.33■■□□□ 1.17
CTDSP1-203ENST00000431127 PHAXQ9H814 394 aaKnown RBP22.33■■□□□ 1.17
CTDSP1-203ENST00000431127 SUSD4Q5VX71 490 aa22.32■■□□□ 1.16
CTDSP1-203ENST00000431127 RIC3Q7Z5B4 369 aa22.32■■□□□ 1.16
CTDSP1-203ENST00000431127 UTP14AQ9BVJ6 771 aaKnown RBP22.31■■□□□ 1.16
CTDSP1-203ENST00000431127 RNF123Q5XPI4 1314 aa22.31■■□□□ 1.16
CTDSP1-203ENST00000431127 SLC4A2P04920 1241 aa22.3■■□□□ 1.16
CTDSP1-203ENST00000431127 TTLL6Q8N841 843 aa22.3■■□□□ 1.16
CTDSP1-203ENST00000431127 KLRG2A4D1S0 409 aaPredicted RBP22.29■■□□□ 1.16
CTDSP1-203ENST00000431127 NTSR2O95665 410 aa22.29■■□□□ 1.16
CTDSP1-203ENST00000431127 SRGNP10124 158 aa22.29■■□□□ 1.16
CTDSP1-203ENST00000431127 SLFN5Q08AF3 891 aa22.29■■□□□ 1.16
CTDSP1-203ENST00000431127 NLRP10Q86W26 655 aa22.29■■□□□ 1.16
CTDSP1-203ENST00000431127 NUTM1Q86Y26 1132 aa22.29■■□□□ 1.16
CTDSP1-203ENST00000431127 ZNF622Q969S3 477 aaKnown RBP eCLIP22.29■■□□□ 1.16
CTDSP1-203ENST00000431127 TCERG1O14776 1098 aaKnown RBP22.28■■□□□ 1.16
CTDSP1-203ENST00000431127 ERFEQ4G0M1 354 aa22.28■■□□□ 1.16
CTDSP1-203ENST00000431127 STYK1Q6J9G0 422 aa22.28■■□□□ 1.16
CTDSP1-203ENST00000431127 MASTLQ96GX5 879 aa22.28■■□□□ 1.16
CTDSP1-203ENST00000431127 BRCA1P38398 1863 aaKnown RBP22.27■■□□□ 1.16
CTDSP1-203ENST00000431127 TRIM28Q13263 835 aaKnown RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms