RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 C4AP0C0L4 1744 aa10.84□□□□□ -0.67
ECHDC1-207ENST00000430841 TNRC6CQ9HCJ0 1690 aaKnown RBP10.83□□□□□ -0.68
ECHDC1-207ENST00000430841 FYB1O15117 783 aa10.83□□□□□ -0.68
ECHDC1-207ENST00000430841 HSP90AB1P08238 724 aaKnown RBP10.83□□□□□ -0.68
ECHDC1-207ENST00000430841 DALRD3Q5D0E6 543 aaKnown RBP10.83□□□□□ -0.68
ECHDC1-207ENST00000430841 SMC1BQ8NDV3 1235 aa10.83□□□□□ -0.68
ECHDC1-207ENST00000430841 PIM2Q9P1W9 311 aa10.83□□□□□ -0.68
ECHDC1-207ENST00000430841 KIF13BQ9NQT8 1826 aa10.83□□□□□ -0.68
ECHDC1-207ENST00000430841 RIOK3O14730 519 aaKnown RBP10.82□□□□□ -0.68
ECHDC1-207ENST00000430841 PRKCSHP14314 528 aaPredicted RBP10.82□□□□□ -0.68
ECHDC1-207ENST00000430841 DPEP1P16444 411 aa10.82□□□□□ -0.68
ECHDC1-207ENST00000430841 DMRTA1Q5VZB9 504 aa10.82□□□□□ -0.68
ECHDC1-207ENST00000430841 ASAP1Q9ULH1 1129 aa10.82□□□□□ -0.68
ECHDC1-207ENST00000430841 KCPQ6ZWJ8 1503 aa10.81□□□□□ -0.68
ECHDC1-207ENST00000430841 ITPK1Q13572 414 aa10.81□□□□□ -0.68
ECHDC1-207ENST00000430841 AMIGO3Q86WK7 504 aa10.81□□□□□ -0.68
ECHDC1-207ENST00000430841 EMILIN1Q9Y6C2 1016 aa10.81□□□□□ -0.68
ECHDC1-207ENST00000430841 MAP2P11137 1827 aaKnown RBP10.81□□□□□ -0.68
ECHDC1-207ENST00000430841 ARFGEF1Q9Y6D6 1849 aa10.81□□□□□ -0.68
ECHDC1-207ENST00000430841 ANKRD26Q9UPS8 1709 aa10.81□□□□□ -0.68
ECHDC1-207ENST00000430841 RGL2O15211 777 aa10.8□□□□□ -0.68
ECHDC1-207ENST00000430841 PHKG2P15735 406 aa10.8□□□□□ -0.68
ECHDC1-207ENST00000430841 NKX1-1Q15270 411 aaPredicted RBP10.8□□□□□ -0.68
ECHDC1-207ENST00000430841 TPRNQ4KMQ1 711 aa10.8□□□□□ -0.68
ECHDC1-207ENST00000430841 TESK2Q96S53 571 aa10.8□□□□□ -0.68
ECHDC1-207ENST00000430841 SLC34A2O95436 690 aa10.79□□□□□ -0.68
ECHDC1-207ENST00000430841 CABP4P57796 275 aa10.79□□□□□ -0.68
ECHDC1-207ENST00000430841 C1orf141Q5JVX7 400 aa10.79□□□□□ -0.68
ECHDC1-207ENST00000430841 DNAJC5GQ8N7S2 189 aa10.79□□□□□ -0.68
ECHDC1-207ENST00000430841 CNTNAP4Q9C0A0 1308 aa10.79□□□□□ -0.68
ECHDC1-207ENST00000430841 HTRA3P83110 453 aa10.78□□□□□ -0.68
ECHDC1-207ENST00000430841 COL13A1Q5TAT6 717 aaPredicted RBP10.78□□□□□ -0.68
ECHDC1-207ENST00000430841 RC3H1Q5TC82 1133 aaKnown RBP10.78□□□□□ -0.68
ECHDC1-207ENST00000430841 ARHGEF1Q92888 912 aaKnown RBP10.78□□□□□ -0.68
ECHDC1-207ENST00000430841 DCAF5Q96JK2 942 aa10.78□□□□□ -0.68
ECHDC1-207ENST00000430841 POLR3GLQ9BT43 218 aa10.78□□□□□ -0.68
ECHDC1-207ENST00000430841 MFRPQ9BY79 579 aa10.78□□□□□ -0.68
ECHDC1-207ENST00000430841 RRAGCQ9HB90 399 aa10.78□□□□□ -0.68
ECHDC1-207ENST00000430841 ATG3Q9NT62 314 aa10.78□□□□□ -0.68
ECHDC1-207ENST00000430841 KIAA1551Q9HCM1 1747 aa10.78□□□□□ -0.68
ECHDC1-207ENST00000430841 BRCA1P38398 1863 aaKnown RBP10.77□□□□□ -0.69
ECHDC1-207ENST00000430841 ERVV-2B6SEH9 535 aa10.77□□□□□ -0.69
ECHDC1-207ENST00000430841 ZPR1O75312 459 aa10.77□□□□□ -0.69
ECHDC1-207ENST00000430841 RPS6KA4O75676 772 aa10.77□□□□□ -0.69
ECHDC1-207ENST00000430841 GYS1P13807 737 aa10.77□□□□□ -0.69
ECHDC1-207ENST00000430841 PRELPP51888 382 aa10.77□□□□□ -0.69
ECHDC1-207ENST00000430841 PLEKHO1Q53GL0 409 aaPredicted RBP10.77□□□□□ -0.69
ECHDC1-207ENST00000430841 ZNF530Q6P9A1 599 aaPredicted RBP10.77□□□□□ -0.69
ECHDC1-207ENST00000430841 JMYQ8N9B5 988 aa10.77□□□□□ -0.69
ECHDC1-207ENST00000430841 ZC3H4Q9UPT8 1303 aaKnown RBP10.77□□□□□ -0.69
ECHDC1-207ENST00000430841 KDRP35968 1356 aa10.77□□□□□ -0.69
ECHDC1-207ENST00000430841 ZNF831Q5JPB2 1677 aa10.76□□□□□ -0.69
ECHDC1-207ENST00000430841 COL5A3P25940 1745 aaPredicted RBP10.76□□□□□ -0.69
ECHDC1-207ENST00000430841 ARHGAP33O14559 1287 aa10.76□□□□□ -0.69
ECHDC1-207ENST00000430841 PTCD1O75127 700 aaKnown RBP10.76□□□□□ -0.69
ECHDC1-207ENST00000430841 TNNT2P45379 298 aaPredicted RBP10.76□□□□□ -0.69
ECHDC1-207ENST00000430841 PSEN2P49810 448 aa10.76□□□□□ -0.69
ECHDC1-207ENST00000430841 EYA1Q99502 592 aa10.76□□□□□ -0.69
ECHDC1-207ENST00000430841 WASHC2AQ641Q2 1341 aa10.76□□□□□ -0.69
ECHDC1-207ENST00000430841 NCAPD2Q15021 1401 aa10.75□□□□□ -0.69
ECHDC1-207ENST00000430841 HSPA1AP0DMV8 641 aaKnown RBP10.75□□□□□ -0.69
ECHDC1-207ENST00000430841 HSPA1BP0DMV9 641 aaKnown RBP10.75□□□□□ -0.69
ECHDC1-207ENST00000430841 VEGFAP15692 232 aaPredicted RBP10.75□□□□□ -0.69
ECHDC1-207ENST00000430841 AMOTQ4VCS5 1084 aa10.75□□□□□ -0.69
ECHDC1-207ENST00000430841 NPHP1O15259 732 aa10.74□□□□□ -0.69
ECHDC1-207ENST00000430841 LMNB1P20700 586 aa10.74□□□□□ -0.69
ECHDC1-207ENST00000430841 CRKLP46109 303 aaKnown RBP10.74□□□□□ -0.69
ECHDC1-207ENST00000430841 MTHFSP49914 203 aa10.74□□□□□ -0.69
ECHDC1-207ENST00000430841 AIDAQ96BJ3 306 aa10.74□□□□□ -0.69
ECHDC1-207ENST00000430841 TIAM2Q8IVF5 1701 aa10.73□□□□□ -0.69
ECHDC1-207ENST00000430841 CHRNA5P30532 468 aa10.73□□□□□ -0.69
ECHDC1-207ENST00000430841 NPM2Q86SE8 214 aaKnown RBP10.73□□□□□ -0.69
ECHDC1-207ENST00000430841 USP42Q9H9J4 1324 aaKnown RBP10.73□□□□□ -0.69
ECHDC1-207ENST00000430841 RASSF7Q02833 373 aa10.72□□□□□ -0.69
ECHDC1-207ENST00000430841 EIF4A2Q14240 407 aaKnown RBP10.72□□□□□ -0.69
ECHDC1-207ENST00000430841 NBR1Q14596 966 aa10.72□□□□□ -0.69
ECHDC1-207ENST00000430841 SRP68Q9UHB9 627 aaKnown RBP10.72□□□□□ -0.69
ECHDC1-207ENST00000430841 GLTPD2A6NH11 291 aa10.7□□□□□ -0.7
ECHDC1-207ENST00000430841 H0YIN7 160 aa10.7□□□□□ -0.7
ECHDC1-207ENST00000430841 TTLL6Q8N841 843 aa10.7□□□□□ -0.7
ECHDC1-207ENST00000430841 SBF1O95248 1867 aa10.7□□□□□ -0.7
ECHDC1-207ENST00000430841 TK2O00142 265 aa10.69□□□□□ -0.7
ECHDC1-207ENST00000430841 KCNA3P22001 575 aa10.69□□□□□ -0.7
ECHDC1-207ENST00000430841 DDR1Q08345 913 aa10.69□□□□□ -0.7
ECHDC1-207ENST00000430841 USPL1Q5W0Q7 1092 aa10.69□□□□□ -0.7
ECHDC1-207ENST00000430841 C2CD5Q86YS7 1000 aa10.69□□□□□ -0.7
ECHDC1-207ENST00000430841 HS6ST3Q8IZP7 471 aa10.69□□□□□ -0.7
ECHDC1-207ENST00000430841 KCTD12Q96CX2 325 aaKnown RBP10.69□□□□□ -0.7
ECHDC1-207ENST00000430841 TSHZ2Q9NRE2 1034 aa10.69□□□□□ -0.7
ECHDC1-207ENST00000430841 POLKQ9UBT6 870 aa10.69□□□□□ -0.7
ECHDC1-207ENST00000430841 KDM6AO15550 1401 aaPredicted RBP10.68□□□□□ -0.7
ECHDC1-207ENST00000430841 COL15A1P39059 1388 aa10.68□□□□□ -0.7
ECHDC1-207ENST00000430841 POLRMTO00411 1230 aaKnown RBP10.68□□□□□ -0.7
ECHDC1-207ENST00000430841 NFATC2IPQ8NCF5 419 aa10.68□□□□□ -0.7
ECHDC1-207ENST00000430841 SLC4A9Q96Q91 983 aa10.68□□□□□ -0.7
ECHDC1-207ENST00000430841 CARD14Q9BXL6 1004 aa10.68□□□□□ -0.7
ECHDC1-207ENST00000430841 MYH14Q7Z406 1995 aaKnown RBP10.68□□□□□ -0.7
ECHDC1-207ENST00000430841 TJP1Q07157 1748 aa10.67□□□□□ -0.7
ECHDC1-207ENST00000430841 ERFEQ4G0M1 354 aa10.67□□□□□ -0.7
ECHDC1-207ENST00000430841 ZNF622Q969S3 477 aaKnown RBP eCLIP10.67□□□□□ -0.71e-7■□□□□ 9.8
Retrieved 100 of 20,778 RNA–protein pairs in 184.9 ms