RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 CWC27Q6UX04 472 aaKnown RBP18.87■□□□□ 0.61
RIF1-204ENST00000430328 MIA2Q96PC5 1412 aa18.86■□□□□ 0.61
RIF1-204ENST00000430328 ZBTB17Q13105 803 aa18.86■□□□□ 0.61
RIF1-204ENST00000430328 MAP7Q14244 749 aa18.86■□□□□ 0.61
RIF1-204ENST00000430328 STX1AQ16623 288 aa18.86■□□□□ 0.61
RIF1-204ENST00000430328 SYNCQ9H7C4 482 aa18.86■□□□□ 0.61
RIF1-204ENST00000430328 CCT4P50991 539 aaKnown RBP18.86■□□□□ 0.61
RIF1-204ENST00000430328 DDX27Q96GQ7 796 aaKnown RBP18.86■□□□□ 0.61
RIF1-204ENST00000430328 RASSF4Q9H2L5 321 aa18.86■□□□□ 0.61
RIF1-204ENST00000430328 U3KPZ7 1027 aaPredicted RBP18.86■□□□□ 0.61
RIF1-204ENST00000430328 TSPYL2Q9H2G4 693 aaPredicted RBP18.86■□□□□ 0.61
RIF1-204ENST00000430328 ERCC6LQ2NKX8 1250 aa18.86■□□□□ 0.61
RIF1-204ENST00000430328 SEC62Q99442 399 aaKnown RBP18.85■□□□□ 0.61
RIF1-204ENST00000430328 C1orf115Q9H7X2 142 aa18.85■□□□□ 0.61
RIF1-204ENST00000430328 PPP1R12CQ9BZL4 782 aa18.85■□□□□ 0.61
RIF1-204ENST00000430328 CHMP4BP1P59074 171 aa18.85■□□□□ 0.61
RIF1-204ENST00000430328 TACC3Q9Y6A5 838 aa18.85■□□□□ 0.61
RIF1-204ENST00000430328 SPTY2D1Q68D10 685 aaPredicted RBP18.85■□□□□ 0.61
RIF1-204ENST00000430328 ZNF354CQ86Y25 554 aa18.85■□□□□ 0.61
RIF1-204ENST00000430328 SIL1Q9H173 461 aa18.85■□□□□ 0.61
RIF1-204ENST00000430328 ZEB2O60315 1214 aa18.85■□□□□ 0.61
RIF1-204ENST00000430328 CCDC40Q4G0X9 1142 aa18.85■□□□□ 0.61
RIF1-204ENST00000430328 PIP4K2BP78356 416 aa18.84■□□□□ 0.61
RIF1-204ENST00000430328 WDR70Q9NW82 654 aa18.84■□□□□ 0.61
RIF1-204ENST00000430328 NEDD9Q14511 834 aa18.84■□□□□ 0.61
RIF1-204ENST00000430328 GSTA5Q7RTV2 222 aa18.84■□□□□ 0.61
RIF1-204ENST00000430328 SYCP3Q8IZU3 236 aa18.84■□□□□ 0.61
RIF1-204ENST00000430328 VPS52Q8N1B4 723 aa18.84■□□□□ 0.61
RIF1-204ENST00000430328 ADCY5O95622 1261 aa18.84■□□□□ 0.61
RIF1-204ENST00000430328 JAKMIP2Q96AA8 810 aa18.83■□□□□ 0.61
RIF1-204ENST00000430328 C8orf76Q96K31 380 aa18.83■□□□□ 0.61
RIF1-204ENST00000430328 A0A1B0GUL7 405 aa18.83■□□□□ 0.61
RIF1-204ENST00000430328 PLEKHH1Q9ULM0 1364 aa18.83■□□□□ 0.61
RIF1-204ENST00000430328 CEP85LQ5SZL2 805 aa18.83■□□□□ 0.61
RIF1-204ENST00000430328 CTAGE9A4FU28 777 aa18.83■□□□□ 0.6
RIF1-204ENST00000430328 INTS8Q75QN2 995 aaKnown RBP18.83■□□□□ 0.6
RIF1-204ENST00000430328 PFDN4Q9NQP4 134 aa18.83■□□□□ 0.6
RIF1-204ENST00000430328 CARMIL2Q6F5E8 1435 aa18.83■□□□□ 0.6
RIF1-204ENST00000430328 B4GALNT4Q76KP1 1039 aa18.83■□□□□ 0.6
RIF1-204ENST00000430328 PYM1Q9BRP8 204 aaKnown RBP18.83■□□□□ 0.6
RIF1-204ENST00000430328 VCXQ9H320 206 aa18.83■□□□□ 0.6
RIF1-204ENST00000430328 CCDC50Q8IVM0 306 aa18.83■□□□□ 0.6
RIF1-204ENST00000430328 EHMT1Q9H9B1 1298 aa18.83■□□□□ 0.6
RIF1-204ENST00000430328 LRP2BPQ9P2M1 347 aa18.83■□□□□ 0.6
RIF1-204ENST00000430328 ATP2A2P16615 1042 aaKnown RBP18.83■□□□□ 0.6
RIF1-204ENST00000430328 CALML4Q96GE6 196 aa18.83■□□□□ 0.6
RIF1-204ENST00000430328 USP25Q9UHP3 1055 aa18.83■□□□□ 0.6
RIF1-204ENST00000430328 CTAGE15A4D2H0 777 aa18.82■□□□□ 0.6
RIF1-204ENST00000430328 CTAGE8P0CG41 777 aa18.82■□□□□ 0.6
RIF1-204ENST00000430328 CTAGE4Q8IX94 777 aa18.82■□□□□ 0.6
RIF1-204ENST00000430328 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.82■□□□□ 0.6
RIF1-204ENST00000430328 CUL5Q93034 780 aa18.82■□□□□ 0.6
RIF1-204ENST00000430328 RAB3IPQ96QF0 476 aaPredicted RBP18.82■□□□□ 0.6
RIF1-204ENST00000430328 A0A087WZG4 1122 aa18.82■□□□□ 0.6
RIF1-204ENST00000430328 NBPF11Q86T75 865 aa18.82■□□□□ 0.6
RIF1-204ENST00000430328 PLCD3Q8N3E9 789 aa18.82■□□□□ 0.6
RIF1-204ENST00000430328 MRVI1Q9Y6F6 885 aa18.82■□□□□ 0.6
RIF1-204ENST00000430328 BUB1BO60566 1050 aaPredicted RBP18.82■□□□□ 0.6
RIF1-204ENST00000430328 CLNS1AP54105 237 aaKnown RBP18.82■□□□□ 0.6
RIF1-204ENST00000430328 PDE3AQ14432 1141 aa18.82■□□□□ 0.6
RIF1-204ENST00000430328 RSPH3Q86UC2 560 aa18.82■□□□□ 0.6
RIF1-204ENST00000430328 AACSQ86V21 672 aa18.82■□□□□ 0.6
RIF1-204ENST00000430328 BACH2Q9BYV9 841 aa18.81■□□□□ 0.6
RIF1-204ENST00000430328 GAS2L2Q8NHY3 880 aa18.81■□□□□ 0.6
RIF1-204ENST00000430328 KRT13P13646 458 aa18.81■□□□□ 0.6
RIF1-204ENST00000430328 TSNAXIP1Q2TAA8 658 aa18.81■□□□□ 0.6
RIF1-204ENST00000430328 CCT6BQ92526 530 aa18.81■□□□□ 0.6
RIF1-204ENST00000430328 AKAP2Q9Y2D5 859 aa18.81■□□□□ 0.6
RIF1-204ENST00000430328 CAVIN2O95810 425 aa18.81■□□□□ 0.6
RIF1-204ENST00000430328 KANK3Q6NY19 840 aa18.81■□□□□ 0.6
RIF1-204ENST00000430328 ARFGAP2Q8N6H7 521 aa18.81■□□□□ 0.6
RIF1-204ENST00000430328 SPAG5Q96R06 1193 aa18.81■□□□□ 0.6
RIF1-204ENST00000430328 CYLC1P35663 651 aaPredicted RBP18.8■□□□□ 0.6
RIF1-204ENST00000430328 STX6O43752 255 aa18.8■□□□□ 0.6
RIF1-204ENST00000430328 CHD1LQ86WJ1 897 aa18.8■□□□□ 0.6
RIF1-204ENST00000430328 BAG4O95429 457 aaKnown RBP18.8■□□□□ 0.6
RIF1-204ENST00000430328 PHLDB2Q86SQ0 1253 aa18.8■□□□□ 0.6
RIF1-204ENST00000430328 VPS18Q9P253 973 aa18.8■□□□□ 0.6
RIF1-204ENST00000430328 ERCC5P28715 1186 aaPredicted RBP18.8■□□□□ 0.6
RIF1-204ENST00000430328 LRSAM1Q6UWE0 723 aa18.8■□□□□ 0.6
RIF1-204ENST00000430328 PHF23Q9BUL5 403 aaPredicted RBP18.8■□□□□ 0.6
RIF1-204ENST00000430328 DDX19AQ9NUU7 478 aaKnown RBP18.8■□□□□ 0.6
RIF1-204ENST00000430328 VPS8Q8N3P4 1428 aa18.79■□□□□ 0.6
RIF1-204ENST00000430328 CEP128Q6ZU80 1094 aa18.79■□□□□ 0.6
RIF1-204ENST00000430328 MIER3Q7Z3K6 550 aa18.79■□□□□ 0.6
RIF1-204ENST00000430328 NOB1Q9ULX3 412 aaKnown RBP18.79■□□□□ 0.6
RIF1-204ENST00000430328 AIDAQ96BJ3 306 aa18.79■□□□□ 0.6
RIF1-204ENST00000430328 TCP11L1Q9NUJ3 509 aa18.79■□□□□ 0.6
RIF1-204ENST00000430328 BICDL2A1A5D9 508 aa18.79■□□□□ 0.6
RIF1-204ENST00000430328 GOLGA1Q92805 767 aa18.79■□□□□ 0.6
RIF1-204ENST00000430328 DACT3Q96B18 629 aaPredicted RBP18.79■□□□□ 0.6
RIF1-204ENST00000430328 NLRP2Q9NX02 1062 aa18.79■□□□□ 0.6
RIF1-204ENST00000430328 PPP1R1BQ9UD71 204 aaPredicted RBP18.79■□□□□ 0.6
RIF1-204ENST00000430328 SDCCAG8Q86SQ7 713 aaPredicted RBP18.79■□□□□ 0.6
RIF1-204ENST00000430328 WDHD1O75717 1129 aaPredicted RBP18.78■□□□□ 0.6
RIF1-204ENST00000430328 RNF216Q9NWF9 866 aaPredicted RBP18.78■□□□□ 0.6
RIF1-204ENST00000430328 CKAP2LQ8IYA6 745 aa18.78■□□□□ 0.6
RIF1-204ENST00000430328 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.78■□□□□ 0.61e-7■■□□□ 13.1
RIF1-204ENST00000430328 AKR1B10O60218 316 aa18.78■□□□□ 0.6
RIF1-204ENST00000430328 KCNK9Q9NPC2 374 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms