RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 BIN2Q9UBW5 565 aaPredicted RBP8.82□□□□□ -1
CNOT4-206ENST00000428680 MYO1BO43795 1136 aa8.81□□□□□ -1
CNOT4-206ENST00000428680 IBSPP21815 317 aaPredicted RBP8.81□□□□□ -1
CNOT4-206ENST00000428680 SF3A1Q15459 793 aaKnown RBP8.81□□□□□ -1
CNOT4-206ENST00000428680 BTAF1O14981 1849 aa8.81□□□□□ -1
CNOT4-206ENST00000428680 RALYLQ86SE5 291 aaKnown RBP8.81□□□□□ -1
CNOT4-206ENST00000428680 KDM2BQ8NHM5 1336 aa8.81□□□□□ -1
CNOT4-206ENST00000428680 PDE4CQ08493 712 aa8.81□□□□□ -1
CNOT4-206ENST00000428680 HSCBQ8IWL3 235 aa8.81□□□□□ -1
CNOT4-206ENST00000428680 CHMP4BP1P59074 171 aa8.81□□□□□ -1
CNOT4-206ENST00000428680 TRIM29Q14134 588 aa8.81□□□□□ -1
CNOT4-206ENST00000428680 CHD4Q14839 1912 aa8.8□□□□□ -1
CNOT4-206ENST00000428680 SPDYE4A6NLX3 237 aa8.8□□□□□ -1
CNOT4-206ENST00000428680 CREBRFQ8IUR6 639 aa8.8□□□□□ -1
CNOT4-206ENST00000428680 OGFOD1Q8N543 542 aa8.8□□□□□ -1
CNOT4-206ENST00000428680 NBPF6Q5VWK0 638 aa8.8□□□□□ -1
CNOT4-206ENST00000428680 ZKSCAN2Q63HK3 967 aa8.8□□□□□ -1
CNOT4-206ENST00000428680 NBPF5PQ86XG9 351 aaPredicted RBP8.8□□□□□ -1
CNOT4-206ENST00000428680 NBPF4Q96M43 638 aa8.8□□□□□ -1
CNOT4-206ENST00000428680 HSP90AB3PQ58FF7 597 aa8.8□□□□□ -1
CNOT4-206ENST00000428680 CCDC158Q5M9N0 1113 aa8.8□□□□□ -1
CNOT4-206ENST00000428680 DDX46Q7L014 1031 aaKnown RBP8.8□□□□□ -1
CNOT4-206ENST00000428680 CRACR2BQ8N4Y2 399 aaPredicted RBP8.8□□□□□ -1
CNOT4-206ENST00000428680 RTCBQ9Y3I0 505 aaKnown RBP8.8□□□□□ -1
CNOT4-206ENST00000428680 FSTL1Q12841 308 aa8.79□□□□□ -1
CNOT4-206ENST00000428680 CCDC85AQ96PX6 553 aaPredicted RBP8.79□□□□□ -1
CNOT4-206ENST00000428680 RCAN3Q9UKA8 241 aa8.79□□□□□ -1
CNOT4-206ENST00000428680 PALLDQ8WX93 1383 aa8.79□□□□□ -1
CNOT4-206ENST00000428680 VSIG10Q8N0Z9 540 aa8.79□□□□□ -1
CNOT4-206ENST00000428680 RUNDC1Q96C34 613 aa8.79□□□□□ -1
CNOT4-206ENST00000428680 L1TD1Q5T7N2 865 aaKnown RBP8.79□□□□□ -1
CNOT4-206ENST00000428680 KIF16BQ96L93 1317 aa8.79□□□□□ -1
CNOT4-206ENST00000428680 ZKSCAN1P17029 563 aaPredicted RBP8.79□□□□□ -1
CNOT4-206ENST00000428680 APLP1P51693 650 aa8.79□□□□□ -1
CNOT4-206ENST00000428680 NOL8Q76FK4 1167 aaKnown RBP8.79□□□□□ -1
CNOT4-206ENST00000428680 NME9Q86XW9 330 aa8.78□□□□□ -1
CNOT4-206ENST00000428680 FAM184AQ8NB25 1140 aa8.78□□□□□ -1
CNOT4-206ENST00000428680 ZNF428Q96B54 188 aa8.78□□□□□ -1
CNOT4-206ENST00000428680 CEP126Q9P2H0 1117 aa8.78□□□□□ -1
CNOT4-206ENST00000428680 MYBBP1AQ9BQG0 1328 aaKnown RBP8.78□□□□□ -1
CNOT4-206ENST00000428680 ERC2O15083 957 aa8.78□□□□□ -1
CNOT4-206ENST00000428680 SYT17Q9BSW7 474 aa8.78□□□□□ -1
CNOT4-206ENST00000428680 TRMT112Q9UI30 125 aaKnown RBP8.78□□□□□ -1
CNOT4-206ENST00000428680 E9PSI1 815 aa8.78□□□□□ -1
CNOT4-206ENST00000428680 SART3Q15020 963 aaKnown RBP8.78□□□□□ -1
CNOT4-206ENST00000428680 CLASRPQ8N2M8 674 aaKnown RBP8.78□□□□□ -1
CNOT4-206ENST00000428680 ATP6V1AP38606 617 aa8.77□□□□□ -1
CNOT4-206ENST00000428680 USHBP1Q8N6Y0 703 aa8.77□□□□□ -1
CNOT4-206ENST00000428680 KAT6BQ8WYB5 2073 aa8.77□□□□□ -1
CNOT4-206ENST00000428680 CAVIN4Q5BKX8 364 aa8.77□□□□□ -1.01
CNOT4-206ENST00000428680 TRAPPC3LQ5T215 181 aa8.77□□□□□ -1.01
CNOT4-206ENST00000428680 SETDB2Q96T68 719 aa8.77□□□□□ -1.01
CNOT4-206ENST00000428680 RAI14Q9P0K7 980 aa8.77□□□□□ -1.01
CNOT4-206ENST00000428680 PXDNLA1KZ92 1463 aa8.77□□□□□ -1.01
CNOT4-206ENST00000428680 DOT1LQ8TEK3 1739 aa8.77□□□□□ -1.01
CNOT4-206ENST00000428680 TRIM44Q96DX7 344 aaPredicted RBP8.77□□□□□ -1.01
CNOT4-206ENST00000428680 ABCF2Q9UG63 623 aa8.77□□□□□ -1.01
CNOT4-206ENST00000428680 HDAC9Q9UKV0 1011 aa8.77□□□□□ -1.01
CNOT4-206ENST00000428680 GNAI3P08754 354 aa8.77□□□□□ -1.01
CNOT4-206ENST00000428680 ZNF408Q9H9D4 720 aa8.77□□□□□ -1.01
CNOT4-206ENST00000428680 MYOM1P52179 1685 aa8.77□□□□□ -1.01
CNOT4-206ENST00000428680 TTC39AQ5SRH9 613 aa8.76□□□□□ -1.01
CNOT4-206ENST00000428680 ANKRD45Q5TZF3 282 aa8.76□□□□□ -1.01
CNOT4-206ENST00000428680 CC2D2BQ6DHV5 1058 aa8.76□□□□□ -1.01
CNOT4-206ENST00000428680 FEZ1Q99689 392 aa8.76□□□□□ -1.01
CNOT4-206ENST00000428680 RNF20Q5VTR2 975 aa8.76□□□□□ -1.01
CNOT4-206ENST00000428680 CCDC47Q96A33 483 aaKnown RBP8.76□□□□□ -1.01
CNOT4-206ENST00000428680 NACAP1Q9BZK3 213 aa8.76□□□□□ -1.01
CNOT4-206ENST00000428680 LRP2BPQ9P2M1 347 aa8.76□□□□□ -1.01
CNOT4-206ENST00000428680 H3BQV1 296 aa8.76□□□□□ -1.01
CNOT4-206ENST00000428680 IFFO2Q5TF58 517 aa8.76□□□□□ -1.01
CNOT4-206ENST00000428680 ATF7IPQ6VMQ6 1270 aa8.76□□□□□ -1.01
CNOT4-206ENST00000428680 PES1O00541 588 aaKnown RBP8.75□□□□□ -1.01
CNOT4-206ENST00000428680 DPY19L2Q6NUT2 758 aa8.75□□□□□ -1.01
CNOT4-206ENST00000428680 PPP1R42Q7Z4L9 355 aa8.75□□□□□ -1.01
CNOT4-206ENST00000428680 RBM46Q8TBY0 533 aaKnown RBP8.75□□□□□ -1.01
CNOT4-206ENST00000428680 VTI1AQ96AJ9 217 aa8.75□□□□□ -1.01
CNOT4-206ENST00000428680 FMNL2Q96PY5 1086 aa8.75□□□□□ -1.01
CNOT4-206ENST00000428680 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.75□□□□□ -1.01
CNOT4-206ENST00000428680 MFAP1P55081 439 aaKnown RBP8.75□□□□□ -1.01
CNOT4-206ENST00000428680 TESK2Q96S53 571 aa8.75□□□□□ -1.01
CNOT4-206ENST00000428680 GNAT3A8MTJ3 354 aa8.75□□□□□ -1.01
CNOT4-206ENST00000428680 SURF6O75683 361 aaKnown RBP8.75□□□□□ -1.01
CNOT4-206ENST00000428680 IFIT1P09914 478 aaKnown RBP8.75□□□□□ -1.01
CNOT4-206ENST00000428680 RRP12Q5JTH9 1297 aaKnown RBP8.75□□□□□ -1.01
CNOT4-206ENST00000428680 FHDC1Q9C0D6 1143 aaPredicted RBP8.75□□□□□ -1.01
CNOT4-206ENST00000428680 GPTP24298 496 aa8.74□□□□□ -1.01
CNOT4-206ENST00000428680 AKAP4Q5JQC9 854 aa8.74□□□□□ -1.01
CNOT4-206ENST00000428680 RBM26Q5T8P6 1007 aaKnown RBP8.74□□□□□ -1.01
CNOT4-206ENST00000428680 SLF2Q8IX21 1173 aa8.74□□□□□ -1.01
CNOT4-206ENST00000428680 RPS6KA4O75676 772 aa8.74□□□□□ -1.01
CNOT4-206ENST00000428680 PTGER2P43116 358 aa8.74□□□□□ -1.01
CNOT4-206ENST00000428680 GPBP1L1Q9HC44 474 aaPredicted RBP8.74□□□□□ -1.01
CNOT4-206ENST00000428680 C1QTNF8P60827 252 aa8.74□□□□□ -1.01
CNOT4-206ENST00000428680 SAFBQ15424 915 aaKnown RBP eCLIP8.74□□□□□ -1.01
CNOT4-206ENST00000428680 GJA3Q9Y6H8 435 aa8.74□□□□□ -1.01
CNOT4-206ENST00000428680 RNF123Q5XPI4 1314 aa8.74□□□□□ -1.01
CNOT4-206ENST00000428680 DNAJC2Q99543 621 aaKnown RBP8.74□□□□□ -1.01
CNOT4-206ENST00000428680 PRIM1P49642 420 aaKnown RBP8.73□□□□□ -1.01
CNOT4-206ENST00000428680 CDC5LQ99459 802 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms