RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 ZNF622Q969S3 477 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRIM39-208ENST00000428555 ERVV-1B6SEH8 477 aa12.37□□□□□ -0.43
TRIM39-208ENST00000428555 ANXA1P04083 346 aa12.37□□□□□ -0.43
TRIM39-208ENST00000428555 PROSER3Q2NL68 480 aa12.37□□□□□ -0.43
TRIM39-208ENST00000428555 TPTE2Q6XPS3 522 aa12.37□□□□□ -0.43
TRIM39-208ENST00000428555 CFAP44Q96MT7 982 aa12.37□□□□□ -0.43
TRIM39-208ENST00000428555 RGL2O15211 777 aa12.36□□□□□ -0.43
TRIM39-208ENST00000428555 ST5P78524 1137 aa12.36□□□□□ -0.43
TRIM39-208ENST00000428555 C9orf131Q5VYM1 1079 aa12.36□□□□□ -0.43
TRIM39-208ENST00000428555 KIF6Q6ZMV9 814 aa12.36□□□□□ -0.43
TRIM39-208ENST00000428555 LRP10Q7Z4F1 713 aa12.36□□□□□ -0.43
TRIM39-208ENST00000428555 ZBTB3Q9H5J0 574 aa12.36□□□□□ -0.43
TRIM39-208ENST00000428555 PDZRN3Q9UPQ7 1066 aa12.36□□□□□ -0.43
TRIM39-208ENST00000428555 ATP10DQ9P241 1426 aa12.36□□□□□ -0.43
TRIM39-208ENST00000428555 MAP3K15Q6ZN16 1313 aa12.36□□□□□ -0.43
TRIM39-208ENST00000428555 N4BP2Q86UW6 1770 aaPredicted RBP12.35□□□□□ -0.43
TRIM39-208ENST00000428555 GPBP1L1Q9HC44 474 aaPredicted RBP12.35□□□□□ -0.43
TRIM39-208ENST00000428555 MRS2Q9HD23 443 aa12.35□□□□□ -0.43
TRIM39-208ENST00000428555 ZNF219Q9P2Y4 722 aaPredicted RBP12.35□□□□□ -0.43
TRIM39-208ENST00000428555 DLG5Q8TDM6 1919 aa12.35□□□□□ -0.43
TRIM39-208ENST00000428555 ERBB4Q15303 1308 aa12.35□□□□□ -0.43
TRIM39-208ENST00000428555 KIF13BQ9NQT8 1826 aa12.34□□□□□ -0.43
TRIM39-208ENST00000428555 ZNF853P0CG23 659 aa12.34□□□□□ -0.43
TRIM39-208ENST00000428555 SRGNP10124 158 aa12.34□□□□□ -0.43
TRIM39-208ENST00000428555 GPTP24298 496 aa12.34□□□□□ -0.43
TRIM39-208ENST00000428555 GTF2E1P29083 439 aaPredicted RBP12.34□□□□□ -0.43
TRIM39-208ENST00000428555 AIMP1Q12904 312 aaKnown RBP12.34□□□□□ -0.43
TRIM39-208ENST00000428555 COPS6Q7L5N1 327 aa12.34□□□□□ -0.43
TRIM39-208ENST00000428555 MBIPQ9NS73 344 aa12.34□□□□□ -0.43
TRIM39-208ENST00000428555 CHD4Q14839 1912 aa12.34□□□□□ -0.43
TRIM39-208ENST00000428555 KIAA1551Q9HCM1 1747 aa12.34□□□□□ -0.43
TRIM39-208ENST00000428555 ELL2O00472 640 aaPredicted RBP12.33□□□□□ -0.44
TRIM39-208ENST00000428555 C21orf2O43822 256 aa12.33□□□□□ -0.44
TRIM39-208ENST00000428555 C1QTNF8P60827 252 aa12.33□□□□□ -0.44
TRIM39-208ENST00000428555 GNAI1P63096 354 aa12.33□□□□□ -0.44
TRIM39-208ENST00000428555 SUSD4Q5VX71 490 aa12.33□□□□□ -0.44
TRIM39-208ENST00000428555 DUSP27Q5VZP5 1158 aa12.33□□□□□ -0.44
TRIM39-208ENST00000428555 GIGYF2Q6Y7W6 1299 aaKnown RBP12.33□□□□□ -0.44
TRIM39-208ENST00000428555 ZNF34Q8IZ26 560 aa12.33□□□□□ -0.44
TRIM39-208ENST00000428555 XAGE3Q8WTP9 111 aa12.33□□□□□ -0.44
TRIM39-208ENST00000428555 MASTLQ96GX5 879 aa12.33□□□□□ -0.44
TRIM39-208ENST00000428555 DDX21Q9NR30 783 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRIM39-208ENST00000428555 ADCY9O60503 1353 aa12.32□□□□□ -0.44
TRIM39-208ENST00000428555 KLRG2A4D1S0 409 aaPredicted RBP12.32□□□□□ -0.44
TRIM39-208ENST00000428555 PRELPP51888 382 aa12.32□□□□□ -0.44
TRIM39-208ENST00000428555 RASSF7Q02833 373 aa12.32□□□□□ -0.44
TRIM39-208ENST00000428555 CALD1Q05682 793 aaKnown RBP12.32□□□□□ -0.44
TRIM39-208ENST00000428555 ERFEQ4G0M1 354 aa12.32□□□□□ -0.44
TRIM39-208ENST00000428555 HDGFL1Q5TGJ6 251 aa12.32□□□□□ -0.44
TRIM39-208ENST00000428555 STYK1Q6J9G0 422 aa12.32□□□□□ -0.44
TRIM39-208ENST00000428555 NUTM1Q86Y26 1132 aa12.32□□□□□ -0.44
TRIM39-208ENST00000428555 CNKSR1Q969H4 720 aa12.32□□□□□ -0.44
TRIM39-208ENST00000428555 IFT57Q9NWB7 429 aa12.32□□□□□ -0.44
TRIM39-208ENST00000428555 RNF181Q9P0P0 153 aa12.32□□□□□ -0.44
TRIM39-208ENST00000428555 CHPF2Q9P2E5 772 aa12.32□□□□□ -0.44
TRIM39-208ENST00000428555 NYXQ9GZU5 481 aa12.31□□□□□ -0.44
TRIM39-208ENST00000428555 UBN2Q6ZU65 1347 aa12.31□□□□□ -0.44
TRIM39-208ENST00000428555 KDM3BQ7LBC6 1761 aa12.3□□□□□ -0.44
TRIM39-208ENST00000428555 AFDNP55196 1824 aaKnown RBP12.3□□□□□ -0.44
TRIM39-208ENST00000428555 NFKBIEO00221 500 aa12.3□□□□□ -0.44
TRIM39-208ENST00000428555 HOXB7P09629 217 aa12.3□□□□□ -0.44
TRIM39-208ENST00000428555 NPR1P16066 1061 aa12.3□□□□□ -0.44
TRIM39-208ENST00000428555 LMNB1P20700 586 aa12.3□□□□□ -0.44
TRIM39-208ENST00000428555 PRPF40BQ6NWY9 871 aaKnown RBP12.3□□□□□ -0.44
TRIM39-208ENST00000428555 C8orf58Q8NAV2 365 aa12.3□□□□□ -0.44
TRIM39-208ENST00000428555 DBF4Q9UBU7 674 aaPredicted RBP12.3□□□□□ -0.44
TRIM39-208ENST00000428555 SALL2Q9Y467 1007 aaPredicted RBP12.3□□□□□ -0.44
TRIM39-208ENST00000428555 NRXN2Q9P2S2 1712 aa12.3□□□□□ -0.44
TRIM39-208ENST00000428555 TCIRG1Q13488 830 aa12.29□□□□□ -0.44
TRIM39-208ENST00000428555 ANKRD13DQ6ZTN6 518 aa12.29□□□□□ -0.44
TRIM39-208ENST00000428555 WWC1Q8IX03 1113 aa12.29□□□□□ -0.44
TRIM39-208ENST00000428555 C7orf43Q8WVR3 580 aa12.29□□□□□ -0.44
TRIM39-208ENST00000428555 KIF3CO14782 793 aa12.28□□□□□ -0.44
TRIM39-208ENST00000428555 NTSR2O95665 410 aa12.28□□□□□ -0.44
TRIM39-208ENST00000428555 CCDC27Q2M243 656 aa12.28□□□□□ -0.44
TRIM39-208ENST00000428555 PARP10Q53GL7 1025 aa12.28□□□□□ -0.44
TRIM39-208ENST00000428555 OLFM4Q6UX06 510 aa12.28□□□□□ -0.44
TRIM39-208ENST00000428555 PPP1R42Q7Z4L9 355 aa12.28□□□□□ -0.44
TRIM39-208ENST00000428555 FAM9BQ8IZU0 186 aa12.28□□□□□ -0.44
TRIM39-208ENST00000428555 ZNF428Q96B54 188 aa12.28□□□□□ -0.44
TRIM39-208ENST00000428555 UTP14AQ9BVJ6 771 aaKnown RBP12.28□□□□□ -0.44
TRIM39-208ENST00000428555 NMRK2Q9NPI5 230 aa12.28□□□□□ -0.44
TRIM39-208ENST00000428555 HYPKQ9NX55 129 aa12.28□□□□□ -0.44
TRIM39-208ENST00000428555 SCN7AQ01118 1682 aa12.28□□□□□ -0.44
TRIM39-208ENST00000428555 ALDH1B1P30837 517 aa12.27□□□□□ -0.45
TRIM39-208ENST00000428555 HSP90AB3PQ58FF7 597 aa12.27□□□□□ -0.45
TRIM39-208ENST00000428555 C3orf67Q6ZVT6 689 aa12.27□□□□□ -0.45
TRIM39-208ENST00000428555 NLRP10Q86W26 655 aa12.27□□□□□ -0.45
TRIM39-208ENST00000428555 SYNE4Q8N205 404 aa12.27□□□□□ -0.45
TRIM39-208ENST00000428555 TSPYL6Q8N831 410 aa12.27□□□□□ -0.45
TRIM39-208ENST00000428555 TSR2Q969E8 191 aaKnown RBP12.27□□□□□ -0.45
TRIM39-208ENST00000428555 CRY2Q49AN0 593 aa12.26□□□□□ -0.45
TRIM39-208ENST00000428555 SLC10A5Q5PT55 438 aa12.26□□□□□ -0.45
TRIM39-208ENST00000428555 PLBD2Q8NHP8 589 aa12.26□□□□□ -0.45
TRIM39-208ENST00000428555 PHAXQ9H814 394 aaKnown RBP12.26□□□□□ -0.45
TRIM39-208ENST00000428555 RRAGCQ9HB90 399 aa12.26□□□□□ -0.45
TRIM39-208ENST00000428555 ABCC12Q96J65 1359 aa12.26□□□□□ -0.45
TRIM39-208ENST00000428555 ATP5J2-PTCD1G3V325 749 aa12.25□□□□□ -0.45
TRIM39-208ENST00000428555 HCLS1P14317 486 aaPredicted RBP12.25□□□□□ -0.45
TRIM39-208ENST00000428555 HOXA10P31260 410 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms