RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 A1BGP04217 495 aa11.91□□□□□ -0.5
SMC1A-203ENST00000428014 DDR1Q08345 913 aa11.91□□□□□ -0.5
SMC1A-203ENST00000428014 NBPF10Q6P3W6 841 aaKnown RBP11.91□□□□□ -0.5
SMC1A-203ENST00000428014 DZIP3Q86Y13 1208 aaKnown RBP11.91□□□□□ -0.5
SMC1A-203ENST00000428014 NBPF15Q8N660 670 aa11.91□□□□□ -0.5
SMC1A-203ENST00000428014 MRS2Q9HD23 443 aa11.91□□□□□ -0.5
SMC1A-203ENST00000428014 SRP68Q9UHB9 627 aaKnown RBP11.91□□□□□ -0.5
SMC1A-203ENST00000428014 KLRG2A4D1S0 409 aaPredicted RBP11.9□□□□□ -0.5
SMC1A-203ENST00000428014 LRP10Q7Z4F1 713 aa11.9□□□□□ -0.5
SMC1A-203ENST00000428014 NLGN2Q8NFZ4 835 aa11.9□□□□□ -0.5
SMC1A-203ENST00000428014 BRIP1Q9BX63 1249 aa11.9□□□□□ -0.5
SMC1A-203ENST00000428014 AFDNP55196 1824 aaKnown RBP11.89□□□□□ -0.51
SMC1A-203ENST00000428014 ARFGEF1Q9Y6D6 1849 aa11.89□□□□□ -0.51
SMC1A-203ENST00000428014 CCER2I3L3R5 266 aa11.89□□□□□ -0.51
SMC1A-203ENST00000428014 SERPINB2P05120 415 aa11.89□□□□□ -0.51
SMC1A-203ENST00000428014 GPR162Q16538 588 aa11.89□□□□□ -0.51
SMC1A-203ENST00000428014 SMIM5Q71RC9 77 aa11.89□□□□□ -0.51
SMC1A-203ENST00000428014 WDR63Q8IWG1 891 aa11.89□□□□□ -0.51
SMC1A-203ENST00000428014 CCDC146Q8IYE0 955 aa11.89□□□□□ -0.51
SMC1A-203ENST00000428014 SETDB2Q96T68 719 aa11.89□□□□□ -0.51
SMC1A-203ENST00000428014 THUMPD2Q9BTF0 503 aaKnown RBP11.89□□□□□ -0.51
SMC1A-203ENST00000428014 DDX21Q9NR30 783 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMC1A-203ENST00000428014 MAP3K15Q6ZN16 1313 aa11.88□□□□□ -0.51
SMC1A-203ENST00000428014 UTRNP46939 3433 aa11.88□□□□□ -0.51
SMC1A-203ENST00000428014 DLEC1Q9Y238 1755 aa11.88□□□□□ -0.51
SMC1A-203ENST00000428014 KCNA3P22001 575 aa11.88□□□□□ -0.51
SMC1A-203ENST00000428014 PDE6BP35913 854 aa11.88□□□□□ -0.51
SMC1A-203ENST00000428014 PDIA6Q15084 440 aa11.88□□□□□ -0.51
SMC1A-203ENST00000428014 PIM2Q9P1W9 311 aa11.88□□□□□ -0.51
SMC1A-203ENST00000428014 PRAMEF22A3QJZ6 481 aa11.87□□□□□ -0.51
SMC1A-203ENST00000428014 PARP10Q53GL7 1025 aa11.87□□□□□ -0.51
SMC1A-203ENST00000428014 HSP90AB3PQ58FF7 597 aa11.87□□□□□ -0.51
SMC1A-203ENST00000428014 TPTE2Q6XPS3 522 aa11.87□□□□□ -0.51
SMC1A-203ENST00000428014 GIGYF2Q6Y7W6 1299 aaKnown RBP11.87□□□□□ -0.51
SMC1A-203ENST00000428014 WWC1Q8IX03 1113 aa11.87□□□□□ -0.51
SMC1A-203ENST00000428014 REM2Q8IYK8 340 aaPredicted RBP11.87□□□□□ -0.51
SMC1A-203ENST00000428014 NYXQ9GZU5 481 aa11.87□□□□□ -0.51
SMC1A-203ENST00000428014 MIS18AQ9NYP9 233 aa11.87□□□□□ -0.51
SMC1A-203ENST00000428014 DBF4Q9UBU7 674 aaPredicted RBP11.87□□□□□ -0.51
SMC1A-203ENST00000428014 TBC1D2BQ9UPU7 963 aa11.87□□□□□ -0.51
SMC1A-203ENST00000428014 ZC3H4Q9UPT8 1303 aaKnown RBP11.86□□□□□ -0.51
SMC1A-203ENST00000428014 TBC1D9BQ66K14 1250 aa11.86□□□□□ -0.51
SMC1A-203ENST00000428014 KIF6Q6ZMV9 814 aa11.86□□□□□ -0.51
SMC1A-203ENST00000428014 MBIPQ9NS73 344 aa11.86□□□□□ -0.51
SMC1A-203ENST00000428014 HYPKQ9NX55 129 aa11.86□□□□□ -0.51
SMC1A-203ENST00000428014 RRP7AQ9Y3A4 280 aaKnown RBP11.86□□□□□ -0.51
SMC1A-203ENST00000428014 CACNA1FO60840 1977 aa11.86□□□□□ -0.51
SMC1A-203ENST00000428014 GOLGB1Q14789 3259 aaKnown RBP11.85□□□□□ -0.51
SMC1A-203ENST00000428014 YBX3P16989 372 aaKnown RBP eCLIP11.85□□□□□ -0.516e-9■■■□□ 16.1
SMC1A-203ENST00000428014 ST5P78524 1137 aa11.85□□□□□ -0.51
SMC1A-203ENST00000428014 NEUROD2Q15784 382 aa11.85□□□□□ -0.51
SMC1A-203ENST00000428014 CCDC184Q52MB2 194 aa11.85□□□□□ -0.51
SMC1A-203ENST00000428014 PRR5LQ6MZQ0 368 aa11.85□□□□□ -0.51
SMC1A-203ENST00000428014 CNBD1Q8NA66 436 aa11.85□□□□□ -0.51
SMC1A-203ENST00000428014 NUP98P52948 1817 aa11.84□□□□□ -0.51
SMC1A-203ENST00000428014 ADCY9O60503 1353 aa11.84□□□□□ -0.51
SMC1A-203ENST00000428014 H0YIN7 160 aa11.84□□□□□ -0.51
SMC1A-203ENST00000428014 DPEP1P16444 411 aa11.84□□□□□ -0.51
SMC1A-203ENST00000428014 YY1P25490 414 aa11.84□□□□□ -0.51
SMC1A-203ENST00000428014 TRIM28Q13263 835 aaKnown RBP11.84□□□□□ -0.51
SMC1A-203ENST00000428014 GRIPAP1Q4V328 841 aa11.84□□□□□ -0.51
SMC1A-203ENST00000428014 DALRD3Q5D0E6 543 aaKnown RBP11.84□□□□□ -0.51
SMC1A-203ENST00000428014 SOGA3Q5TF21 947 aa11.84□□□□□ -0.51
SMC1A-203ENST00000428014 STYK1Q6J9G0 422 aa11.84□□□□□ -0.51
SMC1A-203ENST00000428014 ZNF34Q8IZ26 560 aa11.84□□□□□ -0.51
SMC1A-203ENST00000428014 KLHL34Q8N239 644 aa11.84□□□□□ -0.51
SMC1A-203ENST00000428014 CRY2Q49AN0 593 aa11.83□□□□□ -0.52
SMC1A-203ENST00000428014 HDGFL1Q5TGJ6 251 aa11.83□□□□□ -0.52
SMC1A-203ENST00000428014 DUSP27Q5VZP5 1158 aa11.83□□□□□ -0.52
SMC1A-203ENST00000428014 CNKSR1Q969H4 720 aa11.83□□□□□ -0.52
SMC1A-203ENST00000428014 NIP7Q9Y221 180 aaKnown RBP eCLIP11.83□□□□□ -0.52
SMC1A-203ENST00000428014 LTBP3Q9NS15 1303 aa11.83□□□□□ -0.52
SMC1A-203ENST00000428014 SRGNP10124 158 aa11.82□□□□□ -0.52
SMC1A-203ENST00000428014 SLC10A5Q5PT55 438 aa11.82□□□□□ -0.52
SMC1A-203ENST00000428014 CCDC30Q5VVM6 783 aa11.82□□□□□ -0.52
SMC1A-203ENST00000428014 PPP1R42Q7Z4L9 355 aa11.82□□□□□ -0.52
SMC1A-203ENST00000428014 NBPF5PQ86XG9 351 aaPredicted RBP11.82□□□□□ -0.52
SMC1A-203ENST00000428014 TTLL6Q8N841 843 aa11.82□□□□□ -0.52
SMC1A-203ENST00000428014 PLBD2Q8NHP8 589 aa11.82□□□□□ -0.52
SMC1A-203ENST00000428014 ANKRD31Q8N7Z5 1873 aa11.82□□□□□ -0.52
SMC1A-203ENST00000428014 ZNF521Q96K83 1311 aa11.82□□□□□ -0.52
SMC1A-203ENST00000428014 N4BP2Q86UW6 1770 aaPredicted RBP11.82□□□□□ -0.52
SMC1A-203ENST00000428014 ARFGEF2Q9Y6D5 1785 aa11.82□□□□□ -0.52
SMC1A-203ENST00000428014 A0A0G2JLW4 131 aa11.81□□□□□ -0.52
SMC1A-203ENST00000428014 HSP90B1P14625 803 aaKnown RBP11.81□□□□□ -0.52
SMC1A-203ENST00000428014 CC2D2BQ6DHV5 1058 aa11.81□□□□□ -0.52
SMC1A-203ENST00000428014 ZNF428Q96B54 188 aa11.81□□□□□ -0.52
SMC1A-203ENST00000428014 MASTLQ96GX5 879 aa11.81□□□□□ -0.52
SMC1A-203ENST00000428014 ZNF330Q9Y3S2 320 aaPredicted RBP11.81□□□□□ -0.52
SMC1A-203ENST00000428014 NPR1P16066 1061 aa11.8□□□□□ -0.52
SMC1A-203ENST00000428014 ALDH1B1P30837 517 aa11.8□□□□□ -0.52
SMC1A-203ENST00000428014 HOXA10P31260 410 aaPredicted RBP11.8□□□□□ -0.52
SMC1A-203ENST00000428014 TCIRG1Q13488 830 aa11.8□□□□□ -0.52
SMC1A-203ENST00000428014 HLFQ16534 295 aa11.8□□□□□ -0.52
SMC1A-203ENST00000428014 MYH16Q9H6N6 1097 aa11.8□□□□□ -0.52
SMC1A-203ENST00000428014 ANKRD36CQ5JPF3 1778 aa11.79□□□□□ -0.52
SMC1A-203ENST00000428014 EIF2S2P20042 333 aaKnown RBP11.79□□□□□ -0.52
SMC1A-203ENST00000428014 TTLL7Q6ZT98 887 aa11.79□□□□□ -0.52
SMC1A-203ENST00000428014 ANKRD13DQ6ZTN6 518 aa11.79□□□□□ -0.52
SMC1A-203ENST00000428014 COPS6Q7L5N1 327 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms