RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 AK5Q9Y6K8 562 aa6.9□□□□□ -1.3
NUDCD1-202ENST00000427660 CLN3Q13286 438 aa6.89□□□□□ -1.31
NUDCD1-202ENST00000427660 EDEM1Q92611 657 aa6.89□□□□□ -1.31
NUDCD1-202ENST00000427660 SETDB2Q96T68 719 aa6.89□□□□□ -1.31
NUDCD1-202ENST00000427660 GMLQ99445 158 aa6.89□□□□□ -1.31
NUDCD1-202ENST00000427660 PRKAG2Q9UGJ0 569 aa6.89□□□□□ -1.31
NUDCD1-202ENST00000427660 USP3Q9Y6I4 520 aa6.89□□□□□ -1.31
NUDCD1-202ENST00000427660 TLL2Q9Y6L7 1015 aa6.89□□□□□ -1.31
NUDCD1-202ENST00000427660 DGKZQ13574 1117 aa6.89□□□□□ -1.31
NUDCD1-202ENST00000427660 ZNF295-AS1Q8N0V1 137 aa6.89□□□□□ -1.31
NUDCD1-202ENST00000427660 IFT43Q96FT9 208 aa6.89□□□□□ -1.31
NUDCD1-202ENST00000427660 NGLY1Q96IV0 654 aa6.89□□□□□ -1.31
NUDCD1-202ENST00000427660 CFHR5Q9BXR6 569 aa6.89□□□□□ -1.31
NUDCD1-202ENST00000427660 FAM13BQ9NYF5 915 aa6.89□□□□□ -1.31
NUDCD1-202ENST00000427660 ADH1AP07327 375 aa6.88□□□□□ -1.31
NUDCD1-202ENST00000427660 ATP2B1P20020 1258 aa6.88□□□□□ -1.31
NUDCD1-202ENST00000427660 KCNC4Q03721 635 aa6.88□□□□□ -1.31
NUDCD1-202ENST00000427660 C1orf53Q5VUE5 145 aa6.88□□□□□ -1.31
NUDCD1-202ENST00000427660 DPH6Q7L8W6 267 aa6.88□□□□□ -1.31
NUDCD1-202ENST00000427660 ZDHHC1Q8WTX9 485 aa6.88□□□□□ -1.31
NUDCD1-202ENST00000427660 CAPN10Q9HC96 672 aa6.88□□□□□ -1.31
NUDCD1-202ENST00000427660 ZNF232Q9UNY5 417 aa6.88□□□□□ -1.31
NUDCD1-202ENST00000427660 SPG7Q9UQ90 795 aa6.88□□□□□ -1.31
NUDCD1-202ENST00000427660 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.88□□□□□ -1.31
NUDCD1-202ENST00000427660 NOP9Q86U38 636 aaKnown RBP6.88□□□□□ -1.31
NUDCD1-202ENST00000427660 L3MBTL2Q969R5 705 aa6.88□□□□□ -1.31
NUDCD1-202ENST00000427660 FHDC1Q9C0D6 1143 aaPredicted RBP6.88□□□□□ -1.31
NUDCD1-202ENST00000427660 ITGBL1O95965 494 aaPredicted RBP6.87□□□□□ -1.31
NUDCD1-202ENST00000427660 CABP1Q9NZU7 370 aa6.87□□□□□ -1.31
NUDCD1-202ENST00000427660 EIF1AYO14602 144 aaKnown RBP6.86□□□□□ -1.31
NUDCD1-202ENST00000427660 NR3C2P08235 984 aa6.86□□□□□ -1.31
NUDCD1-202ENST00000427660 SH3PXD2AQ5TCZ1 1133 aa6.86□□□□□ -1.31
NUDCD1-202ENST00000427660 PPARGC1BQ86YN6 1023 aaKnown RBP6.86□□□□□ -1.31
NUDCD1-202ENST00000427660 TTC16Q8NEE8 873 aa6.86□□□□□ -1.31
NUDCD1-202ENST00000427660 PHACTR1Q9C0D0 580 aa6.86□□□□□ -1.31
NUDCD1-202ENST00000427660 ACBD3Q9H3P7 528 aa6.86□□□□□ -1.31
NUDCD1-202ENST00000427660 HCN4Q9Y3Q4 1203 aa6.86□□□□□ -1.31
NUDCD1-202ENST00000427660 GIPC1O14908 333 aa6.86□□□□□ -1.31
NUDCD1-202ENST00000427660 CTSHP09668 335 aa6.86□□□□□ -1.31
NUDCD1-202ENST00000427660 CENPCQ03188 943 aa6.86□□□□□ -1.31
NUDCD1-202ENST00000427660 HIF1AQ16665 826 aa6.86□□□□□ -1.31
NUDCD1-202ENST00000427660 NCLP19338 710 aaKnown RBP6.85□□□□□ -1.31
NUDCD1-202ENST00000427660 EIF4BP23588 611 aaKnown RBP6.85□□□□□ -1.31
NUDCD1-202ENST00000427660 PTPN12Q05209 780 aaKnown RBP6.85□□□□□ -1.31
NUDCD1-202ENST00000427660 TREML1Q86YW5 311 aa6.85□□□□□ -1.31
NUDCD1-202ENST00000427660 ZNF654Q8IZM8 581 aa6.85□□□□□ -1.31
NUDCD1-202ENST00000427660 RNF166Q96A37 237 aaPredicted RBP6.85□□□□□ -1.31
NUDCD1-202ENST00000427660 NIFKQ9BYG3 293 aaKnown RBP6.85□□□□□ -1.31
NUDCD1-202ENST00000427660 KLK14Q9P0G3 267 aa6.85□□□□□ -1.31
NUDCD1-202ENST00000427660 DDX41Q9UJV9 622 aaKnown RBP6.85□□□□□ -1.31
NUDCD1-202ENST00000427660 WNT7AO00755 349 aa6.85□□□□□ -1.31
NUDCD1-202ENST00000427660 CPNE3O75131 537 aaKnown RBP6.85□□□□□ -1.31
NUDCD1-202ENST00000427660 ORC1Q13415 861 aa6.85□□□□□ -1.31
NUDCD1-202ENST00000427660 KDF1Q8NAX2 398 aaPredicted RBP6.85□□□□□ -1.31
NUDCD1-202ENST00000427660 NUDT16Q96DE0 195 aaKnown RBP6.85□□□□□ -1.31
NUDCD1-202ENST00000427660 GIMAP6Q6P9H5 292 aa6.84□□□□□ -1.31
NUDCD1-202ENST00000427660 NLRP3Q96P20 1036 aa6.84□□□□□ -1.31
NUDCD1-202ENST00000427660 DNAJC2Q99543 621 aaKnown RBP6.84□□□□□ -1.31
NUDCD1-202ENST00000427660 LNPKQ9C0E8 428 aa6.84□□□□□ -1.31
NUDCD1-202ENST00000427660 PTGIRP43119 386 aa6.83□□□□□ -1.32
NUDCD1-202ENST00000427660 ARID5AQ03989 594 aa6.83□□□□□ -1.32
NUDCD1-202ENST00000427660 Q6ZVU0 165 aa6.83□□□□□ -1.32
NUDCD1-202ENST00000427660 HS2ST1Q7LGA3 356 aa6.83□□□□□ -1.32
NUDCD1-202ENST00000427660 GPR152Q8TDT2 470 aa6.83□□□□□ -1.32
NUDCD1-202ENST00000427660 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.83□□□□□ -1.32
NUDCD1-202ENST00000427660 INPP5FQ9Y2H2 1132 aa6.83□□□□□ -1.32
NUDCD1-202ENST00000427660 GTF2E1P29083 439 aaPredicted RBP6.83□□□□□ -1.32
NUDCD1-202ENST00000427660 RBL2Q08999 1139 aa6.83□□□□□ -1.32
NUDCD1-202ENST00000427660 C8orf34Q49A92 452 aa6.83□□□□□ -1.32
NUDCD1-202ENST00000427660 SOGA3Q5TF21 947 aa6.83□□□□□ -1.32
NUDCD1-202ENST00000427660 ZSCAN10Q96SZ4 725 aaPredicted RBP6.83□□□□□ -1.32
NUDCD1-202ENST00000427660 GGNBP2Q9H3C7 697 aa6.83□□□□□ -1.32
NUDCD1-202ENST00000427660 GTF2F1P35269 517 aaKnown RBP eCLIP6.82□□□□□ -1.32
NUDCD1-202ENST00000427660 TNNI2P48788 182 aa6.82□□□□□ -1.32
NUDCD1-202ENST00000427660 USP48Q86UV5 1035 aa6.82□□□□□ -1.32
NUDCD1-202ENST00000427660 RHBDD1Q8TEB9 315 aa6.82□□□□□ -1.32
NUDCD1-202ENST00000427660 DHX38Q92620 1227 aaKnown RBP6.82□□□□□ -1.32
NUDCD1-202ENST00000427660 C12orf49Q9H741 205 aa6.82□□□□□ -1.32
NUDCD1-202ENST00000427660 GPC6Q9Y625 555 aaPredicted RBP6.82□□□□□ -1.32
NUDCD1-202ENST00000427660 USP31Q70CQ4 1352 aa6.81□□□□□ -1.32
NUDCD1-202ENST00000427660 DNAJA1P31689 397 aaKnown RBP6.81□□□□□ -1.32
NUDCD1-202ENST00000427660 XKR5Q6UX68 686 aa6.81□□□□□ -1.32
NUDCD1-202ENST00000427660 PARP3Q9Y6F1 533 aa6.81□□□□□ -1.32
NUDCD1-202ENST00000427660 TGFBR3LH3BV60 316 aa6.81□□□□□ -1.32
NUDCD1-202ENST00000427660 OPLAHO14841 1288 aa6.81□□□□□ -1.32
NUDCD1-202ENST00000427660 MICAL2O94851 1124 aa6.81□□□□□ -1.32
NUDCD1-202ENST00000427660 IER5Q5VY09 327 aa6.81□□□□□ -1.32
NUDCD1-202ENST00000427660 PPP1R18Q6NYC8 613 aa6.81□□□□□ -1.32
NUDCD1-202ENST00000427660 VPS37DQ86XT2 251 aa6.81□□□□□ -1.32
NUDCD1-202ENST00000427660 MRGPRX2Q96LB1 330 aa6.81□□□□□ -1.32
NUDCD1-202ENST00000427660 HIRIP3Q9BW71 556 aaPredicted RBP6.81□□□□□ -1.32
NUDCD1-202ENST00000427660 SRCIN1Q9C0H9 1055 aa6.81□□□□□ -1.32
NUDCD1-202ENST00000427660 BCS1LQ9Y276 419 aa6.81□□□□□ -1.32
NUDCD1-202ENST00000427660 PPM1GO15355 546 aaPredicted RBP6.8□□□□□ -1.32
NUDCD1-202ENST00000427660 GPC1P35052 558 aa6.8□□□□□ -1.32
NUDCD1-202ENST00000427660 ST13P50502 369 aaKnown RBP6.8□□□□□ -1.32
NUDCD1-202ENST00000427660 RACK1P63244 317 aaKnown RBP6.8□□□□□ -1.32
NUDCD1-202ENST00000427660 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.8□□□□□ -1.32
NUDCD1-202ENST00000427660 TMEM214Q6NUQ4 689 aaKnown RBP6.8□□□□□ -1.32
NUDCD1-202ENST00000427660 SRA1Q9HD15 236 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms