RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 PROSER3Q2NL68 480 aa25.11■■□□□ 1.61
COL9A2-204ENST00000427563 DALRD3Q5D0E6 543 aaKnown RBP25.11■■□□□ 1.61
COL9A2-204ENST00000427563 ATP10DQ9P241 1426 aa25.11■■□□□ 1.61
COL9A2-204ENST00000427563 RGL2O15211 777 aa25.1■■□□□ 1.61
COL9A2-204ENST00000427563 C2CD5Q86YS7 1000 aa25.1■■□□□ 1.61
COL9A2-204ENST00000427563 ANXA1P04083 346 aa25.09■■□□□ 1.61
COL9A2-204ENST00000427563 BRIP1Q9BX63 1249 aa25.09■■□□□ 1.61
COL9A2-204ENST00000427563 LAS1LQ9Y4W2 734 aaKnown RBP25.09■■□□□ 1.61
COL9A2-204ENST00000427563 ERBB4Q15303 1308 aa25.09■■□□□ 1.61
COL9A2-204ENST00000427563 SBF1O95248 1867 aa25.09■■□□□ 1.61
COL9A2-204ENST00000427563 ZNF853P0CG23 659 aa25.08■■□□□ 1.61
COL9A2-204ENST00000427563 EIF2S2P20042 333 aaKnown RBP25.08■■□□□ 1.61
COL9A2-204ENST00000427563 ARHGAP27Q6ZUM4 889 aa25.08■■□□□ 1.61
COL9A2-204ENST00000427563 MAP3K15Q6ZN16 1313 aa25.08■■□□□ 1.6
COL9A2-204ENST00000427563 CACNA1SQ13698 1873 aa25.07■■□□□ 1.6
COL9A2-204ENST00000427563 CNBD1Q8NA66 436 aa25.07■■□□□ 1.6
COL9A2-204ENST00000427563 NIP7Q9Y221 180 aaKnown RBP eCLIP25.07■■□□□ 1.6
COL9A2-204ENST00000427563 ZNF652Q9Y2D9 606 aa25.07■■□□□ 1.6
COL9A2-204ENST00000427563 SENP3-EIF4A1A0A087X0R7 540 aa25.06■■□□□ 1.6
COL9A2-204ENST00000427563 CFAP44Q96MT7 982 aa25.06■■□□□ 1.6
COL9A2-204ENST00000427563 TNRC6CQ9HCJ0 1690 aaKnown RBP25.05■■□□□ 1.6
COL9A2-204ENST00000427563 ERVV-1B6SEH8 477 aa25.05■■□□□ 1.6
COL9A2-204ENST00000427563 ANP32CO43423 234 aa25.05■■□□□ 1.6
COL9A2-204ENST00000427563 NECTIN2Q92692 538 aa25.05■■□□□ 1.6
COL9A2-204ENST00000427563 MBIPQ9NS73 344 aa25.05■■□□□ 1.6
COL9A2-204ENST00000427563 ARFGEF2Q9Y6D5 1785 aa25.05■■□□□ 1.6
COL9A2-204ENST00000427563 H0YIN7 160 aa25.04■■□□□ 1.6
COL9A2-204ENST00000427563 NBPF5PQ86XG9 351 aaPredicted RBP25.04■■□□□ 1.6
COL9A2-204ENST00000427563 ZBTB3Q9H5J0 574 aa25.04■■□□□ 1.6
COL9A2-204ENST00000427563 SLX4Q8IY92 1834 aa25.04■■□□□ 1.6
COL9A2-204ENST00000427563 MRS2Q9HD23 443 aa25.03■■□□□ 1.6
COL9A2-204ENST00000427563 UBN2Q6ZU65 1347 aa25.03■■□□□ 1.6
COL9A2-204ENST00000427563 FAM177BA6PVY3 158 aa25.02■■□□□ 1.6
COL9A2-204ENST00000427563 PDE6BP35913 854 aa25.02■■□□□ 1.6
COL9A2-204ENST00000427563 TTLL6Q8N841 843 aa25.02■■□□□ 1.6
COL9A2-204ENST00000427563 ANKRD36CQ5JPF3 1778 aa25.01■■□□□ 1.59
COL9A2-204ENST00000427563 PRELPP51888 382 aa25.01■■□□□ 1.59
COL9A2-204ENST00000427563 ST5P78524 1137 aa25.01■■□□□ 1.59
COL9A2-204ENST00000427563 KIF6Q6ZMV9 814 aa25.01■■□□□ 1.59
COL9A2-204ENST00000427563 SRGNP10124 158 aa25■■□□□ 1.59
COL9A2-204ENST00000427563 ZNF622Q969S3 477 aaKnown RBP eCLIP25■■□□□ 1.59
COL9A2-204ENST00000427563 ABCC12Q96J65 1359 aa25■■□□□ 1.59
COL9A2-204ENST00000427563 CCDC88AQ3V6T2 1871 aa25■■□□□ 1.59
COL9A2-204ENST00000427563 RASSF7Q02833 373 aa24.99■■□□□ 1.59
COL9A2-204ENST00000427563 FER1L6Q2WGJ9 1857 aa24.99■■□□□ 1.59
COL9A2-204ENST00000427563 GIGYF2Q6Y7W6 1299 aaKnown RBP24.99■■□□□ 1.59
COL9A2-204ENST00000427563 ZNF34Q8IZ26 560 aa24.99■■□□□ 1.59
COL9A2-204ENST00000427563 IFT57Q9NWB7 429 aa24.99■■□□□ 1.59
COL9A2-204ENST00000427563 KLRG2A4D1S0 409 aaPredicted RBP24.98■■□□□ 1.59
COL9A2-204ENST00000427563 GPTP24298 496 aa24.98■■□□□ 1.59
COL9A2-204ENST00000427563 C9orf131Q5VYM1 1079 aa24.98■■□□□ 1.59
COL9A2-204ENST00000427563 DUSP27Q5VZP5 1158 aa24.98■■□□□ 1.59
COL9A2-204ENST00000427563 TPTE2Q6XPS3 522 aa24.98■■□□□ 1.59
COL9A2-204ENST00000427563 ZNF526Q8TF50 670 aaPredicted RBP24.98■■□□□ 1.59
COL9A2-204ENST00000427563 DDX21Q9NR30 783 aaKnown RBP eCLIP24.98■■□□□ 1.59
COL9A2-204ENST00000427563 CHPF2Q9P2E5 772 aa24.98■■□□□ 1.59
COL9A2-204ENST00000427563 PDZRN3Q9UPQ7 1066 aa24.98■■□□□ 1.59
COL9A2-204ENST00000427563 NPHP1O15259 732 aa24.97■■□□□ 1.59
COL9A2-204ENST00000427563 HOXB7P09629 217 aa24.97■■□□□ 1.59
COL9A2-204ENST00000427563 SUSD4Q5VX71 490 aa24.97■■□□□ 1.59
COL9A2-204ENST00000427563 COPS6Q7L5N1 327 aa24.97■■□□□ 1.59
COL9A2-204ENST00000427563 XAGE3Q8WTP9 111 aa24.97■■□□□ 1.59
COL9A2-204ENST00000427563 HDGFL1Q5TGJ6 251 aa24.96■■□□□ 1.59
COL9A2-204ENST00000427563 STYK1Q6J9G0 422 aa24.96■■□□□ 1.59
COL9A2-204ENST00000427563 NUTM1Q86Y26 1132 aa24.96■■□□□ 1.59
COL9A2-204ENST00000427563 NFKBIEO00221 500 aa24.95■■□□□ 1.58
COL9A2-204ENST00000427563 GNAI1P63096 354 aa24.95■■□□□ 1.58
COL9A2-204ENST00000427563 MASTLQ96GX5 879 aa24.95■■□□□ 1.58
COL9A2-204ENST00000427563 IBTKQ9P2D0 1353 aaPredicted RBP24.94■■□□□ 1.58
COL9A2-204ENST00000427563 NTSR2O95665 410 aa24.94■■□□□ 1.58
COL9A2-204ENST00000427563 AIMP1Q12904 312 aaKnown RBP24.94■■□□□ 1.58
COL9A2-204ENST00000427563 CCDC27Q2M243 656 aa24.94■■□□□ 1.58
COL9A2-204ENST00000427563 ERFEQ4G0M1 354 aa24.94■■□□□ 1.58
COL9A2-204ENST00000427563 C21orf2O43822 256 aa24.93■■□□□ 1.58
COL9A2-204ENST00000427563 WWC1Q8IX03 1113 aa24.93■■□□□ 1.58
COL9A2-204ENST00000427563 C8orf58Q8NAV2 365 aa24.93■■□□□ 1.58
COL9A2-204ENST00000427563 ZNF219Q9P2Y4 722 aaPredicted RBP24.93■■□□□ 1.58
COL9A2-204ENST00000427563 CALD1Q05682 793 aaKnown RBP24.92■■□□□ 1.58
COL9A2-204ENST00000427563 PRPF40BQ6NWY9 871 aaKnown RBP24.92■■□□□ 1.58
COL9A2-204ENST00000427563 GPBP1L1Q9HC44 474 aaPredicted RBP24.92■■□□□ 1.58
COL9A2-204ENST00000427563 RNF181Q9P0P0 153 aa24.92■■□□□ 1.58
COL9A2-204ENST00000427563 ELL2O00472 640 aaPredicted RBP24.91■■□□□ 1.58
COL9A2-204ENST00000427563 C1QTNF8P60827 252 aa24.91■■□□□ 1.58
COL9A2-204ENST00000427563 C7orf43Q8WVR3 580 aa24.91■■□□□ 1.58
COL9A2-204ENST00000427563 CNKSR1Q969H4 720 aa24.91■■□□□ 1.58
COL9A2-204ENST00000427563 NYXQ9GZU5 481 aa24.91■■□□□ 1.58
COL9A2-204ENST00000427563 RIC1Q4ADV7 1423 aa24.91■■□□□ 1.58
COL9A2-204ENST00000427563 TIAM2Q8IVF5 1701 aa24.91■■□□□ 1.58
COL9A2-204ENST00000427563 C3orf67Q6ZVT6 689 aa24.9■■□□□ 1.58
COL9A2-204ENST00000427563 TSPYL6Q8N831 410 aa24.9■■□□□ 1.58
COL9A2-204ENST00000427563 DICER1Q9UPY3 1922 aaKnown RBP24.9■■□□□ 1.58
COL9A2-204ENST00000427563 LAMB2P55268 1798 aa24.9■■□□□ 1.58
COL9A2-204ENST00000427563 NPR1P16066 1061 aa24.89■■□□□ 1.58
COL9A2-204ENST00000427563 CRY2Q49AN0 593 aa24.89■■□□□ 1.58
COL9A2-204ENST00000427563 TSR2Q969E8 191 aaKnown RBP24.89■■□□□ 1.58
COL9A2-204ENST00000427563 DBF4Q9UBU7 674 aaPredicted RBP24.89■■□□□ 1.58
COL9A2-204ENST00000427563 KIF3CO14782 793 aa24.88■■□□□ 1.57
COL9A2-204ENST00000427563 GTF2E1P29083 439 aaPredicted RBP24.87■■□□□ 1.57
COL9A2-204ENST00000427563 TCIRG1Q13488 830 aa24.87■■□□□ 1.57
COL9A2-204ENST00000427563 NCBP3Q53F19 620 aaKnown RBP24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms