RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 SBF1O95248 1867 aa13.36□□□□□ -0.27
COMMD1-202ENST00000427417 LAMB4A4D0S4 1761 aa13.35□□□□□ -0.27
COMMD1-202ENST00000427417 NBPF26B4DH59 902 aa13.35□□□□□ -0.27
COMMD1-202ENST00000427417 NBPF10Q6P3W6 841 aaKnown RBP13.35□□□□□ -0.27
COMMD1-202ENST00000427417 NBPF15Q8N660 670 aa13.35□□□□□ -0.27
COMMD1-202ENST00000427417 NMRK2Q9NPI5 230 aa13.35□□□□□ -0.27
COMMD1-202ENST00000427417 RNF181Q9P0P0 153 aa13.35□□□□□ -0.27
COMMD1-202ENST00000427417 CACNA1SQ13698 1873 aa13.34□□□□□ -0.27
COMMD1-202ENST00000427417 NBPF5PQ86XG9 351 aaPredicted RBP13.34□□□□□ -0.27
COMMD1-202ENST00000427417 CCDC146Q8IYE0 955 aa13.34□□□□□ -0.27
COMMD1-202ENST00000427417 ZNF219Q9P2Y4 722 aaPredicted RBP13.34□□□□□ -0.27
COMMD1-202ENST00000427417 ERBB4Q15303 1308 aa13.34□□□□□ -0.27
COMMD1-202ENST00000427417 PRELPP51888 382 aa13.33□□□□□ -0.28
COMMD1-202ENST00000427417 TPTE2Q6XPS3 522 aa13.33□□□□□ -0.28
COMMD1-202ENST00000427417 KIF6Q6ZMV9 814 aa13.33□□□□□ -0.28
COMMD1-202ENST00000427417 ZNF622Q969S3 477 aaKnown RBP eCLIP13.33□□□□□ -0.28
COMMD1-202ENST00000427417 ADAMTS8Q9UP79 889 aa13.33□□□□□ -0.28
COMMD1-202ENST00000427417 NIP7Q9Y221 180 aaKnown RBP eCLIP13.33□□□□□ -0.28
COMMD1-202ENST00000427417 RRP7AQ9Y3A4 280 aaKnown RBP13.33□□□□□ -0.28
COMMD1-202ENST00000427417 FAM177BA6PVY3 158 aa13.32□□□□□ -0.28
COMMD1-202ENST00000427417 ERVV-1B6SEH8 477 aa13.32□□□□□ -0.28
COMMD1-202ENST00000427417 NEUROD2Q15784 382 aa13.32□□□□□ -0.28
COMMD1-202ENST00000427417 NGEFQ8N5V2 710 aa13.32□□□□□ -0.28
COMMD1-202ENST00000427417 CCDC88AQ3V6T2 1871 aa13.31□□□□□ -0.28
COMMD1-202ENST00000427417 MYL6BP14649 208 aa13.31□□□□□ -0.28
COMMD1-202ENST00000427417 HLFQ16534 295 aa13.31□□□□□ -0.28
COMMD1-202ENST00000427417 CNKSR1Q969H4 720 aa13.31□□□□□ -0.28
COMMD1-202ENST00000427417 MASTLQ96GX5 879 aa13.31□□□□□ -0.28
COMMD1-202ENST00000427417 MAP3K15Q6ZN16 1313 aa13.31□□□□□ -0.28
COMMD1-202ENST00000427417 NFKBIEO00221 500 aa13.3□□□□□ -0.28
COMMD1-202ENST00000427417 GTF2E1P29083 439 aaPredicted RBP13.3□□□□□ -0.28
COMMD1-202ENST00000427417 STYK1Q6J9G0 422 aa13.3□□□□□ -0.28
COMMD1-202ENST00000427417 NYXQ9GZU5 481 aa13.3□□□□□ -0.28
COMMD1-202ENST00000427417 ZC3H4Q9UPT8 1303 aaKnown RBP13.3□□□□□ -0.28
COMMD1-202ENST00000427417 SLX4Q8IY92 1834 aa13.29□□□□□ -0.28
COMMD1-202ENST00000427417 C21orf2O43822 256 aa13.29□□□□□ -0.28
COMMD1-202ENST00000427417 SRGNP10124 158 aa13.29□□□□□ -0.28
COMMD1-202ENST00000427417 EIF2S2P20042 333 aaKnown RBP13.29□□□□□ -0.28
COMMD1-202ENST00000427417 LMNB1P20700 586 aa13.29□□□□□ -0.28
COMMD1-202ENST00000427417 SOGA3Q5TF21 947 aa13.29□□□□□ -0.28
COMMD1-202ENST00000427417 TRIM35Q9UPQ4 493 aa13.29□□□□□ -0.28
COMMD1-202ENST00000427417 TIAM2Q8IVF5 1701 aa13.29□□□□□ -0.28
COMMD1-202ENST00000427417 KDM2BQ8NHM5 1336 aa13.29□□□□□ -0.28
COMMD1-202ENST00000427417 CHL1O00533 1208 aa13.28□□□□□ -0.28
COMMD1-202ENST00000427417 HSPA6P17066 643 aa13.28□□□□□ -0.28
COMMD1-202ENST00000427417 TTLL7Q6ZT98 887 aa13.28□□□□□ -0.28
COMMD1-202ENST00000427417 LAS1LQ9Y4W2 734 aaKnown RBP13.28□□□□□ -0.28
COMMD1-202ENST00000427417 NPR1P16066 1061 aa13.27□□□□□ -0.29
COMMD1-202ENST00000427417 CALD1Q05682 793 aaKnown RBP13.27□□□□□ -0.29
COMMD1-202ENST00000427417 ZBTB3Q9H5J0 574 aa13.27□□□□□ -0.29
COMMD1-202ENST00000427417 RRAGCQ9HB90 399 aa13.27□□□□□ -0.29
COMMD1-202ENST00000427417 TNRC6CQ9HCJ0 1690 aaKnown RBP13.27□□□□□ -0.29
COMMD1-202ENST00000427417 FER1L6Q2WGJ9 1857 aa13.27□□□□□ -0.29
COMMD1-202ENST00000427417 KLRG2A4D1S0 409 aaPredicted RBP13.26□□□□□ -0.29
COMMD1-202ENST00000427417 TOMM70O94826 608 aa13.26□□□□□ -0.29
COMMD1-202ENST00000427417 HOXB7P09629 217 aa13.26□□□□□ -0.29
COMMD1-202ENST00000427417 NUP98P52948 1817 aa13.26□□□□□ -0.29
COMMD1-202ENST00000427417 PRPF40BQ6NWY9 871 aaKnown RBP13.26□□□□□ -0.29
COMMD1-202ENST00000427417 GIGYF2Q6Y7W6 1299 aaKnown RBP13.26□□□□□ -0.29
COMMD1-202ENST00000427417 CFAP44Q96MT7 982 aa13.26□□□□□ -0.29
COMMD1-202ENST00000427417 IBTKQ9P2D0 1353 aaPredicted RBP13.26□□□□□ -0.29
COMMD1-202ENST00000427417 ARFGEF2Q9Y6D5 1785 aa13.25□□□□□ -0.29
COMMD1-202ENST00000427417 ABCC12Q96J65 1359 aa13.25□□□□□ -0.29
COMMD1-202ENST00000427417 ZNF316A6NFI3 1004 aaPredicted RBP13.25□□□□□ -0.29
COMMD1-202ENST00000427417 ANXA1P04083 346 aa13.25□□□□□ -0.29
COMMD1-202ENST00000427417 GPTP24298 496 aa13.25□□□□□ -0.29
COMMD1-202ENST00000427417 ALDH1B1P30837 517 aa13.25□□□□□ -0.29
COMMD1-202ENST00000427417 PDIA6Q15084 440 aa13.25□□□□□ -0.29
COMMD1-202ENST00000427417 PPP1R42Q7Z4L9 355 aa13.25□□□□□ -0.29
COMMD1-202ENST00000427417 NUTM1Q86Y26 1132 aa13.25□□□□□ -0.29
COMMD1-202ENST00000427417 C16orf71Q8IYS4 520 aaPredicted RBP13.25□□□□□ -0.29
COMMD1-202ENST00000427417 CEP350Q5VT06 3117 aa13.24□□□□□ -0.29
COMMD1-202ENST00000427417 LTBP3Q9NS15 1303 aa13.24□□□□□ -0.29
COMMD1-202ENST00000427417 APAF1O14727 1248 aa13.24□□□□□ -0.29
COMMD1-202ENST00000427417 KRT24Q2M2I5 525 aa13.24□□□□□ -0.29
COMMD1-202ENST00000427417 PARP10Q53GL7 1025 aa13.24□□□□□ -0.29
COMMD1-202ENST00000427417 HSP90AB3PQ58FF7 597 aa13.24□□□□□ -0.29
COMMD1-202ENST00000427417 OLFM4Q6UX06 510 aa13.24□□□□□ -0.29
COMMD1-202ENST00000427417 LRP10Q7Z4F1 713 aa13.24□□□□□ -0.29
COMMD1-202ENST00000427417 ZNF34Q8IZ26 560 aa13.24□□□□□ -0.29
COMMD1-202ENST00000427417 NECTIN2Q92692 538 aa13.24□□□□□ -0.29
COMMD1-202ENST00000427417 TAOK3Q9H2K8 898 aa13.24□□□□□ -0.29
COMMD1-202ENST00000427417 DDX21Q9NR30 783 aaKnown RBP eCLIP13.24□□□□□ -0.29
COMMD1-202ENST00000427417 RIC1Q4ADV7 1423 aa13.23□□□□□ -0.29
COMMD1-202ENST00000427417 UBN2Q6ZU65 1347 aa13.23□□□□□ -0.29
COMMD1-202ENST00000427417 ANP32CO43423 234 aa13.23□□□□□ -0.29
COMMD1-202ENST00000427417 PROSER3Q2NL68 480 aa13.23□□□□□ -0.29
COMMD1-202ENST00000427417 CCDC93Q567U6 631 aa13.23□□□□□ -0.29
COMMD1-202ENST00000427417 HDGFL1Q5TGJ6 251 aa13.23□□□□□ -0.29
COMMD1-202ENST00000427417 IFT57Q9NWB7 429 aa13.23□□□□□ -0.29
COMMD1-202ENST00000427417 DICER1Q9UPY3 1922 aaKnown RBP13.23□□□□□ -0.29
COMMD1-202ENST00000427417 GLTPD2A6NH11 291 aa13.22□□□□□ -0.29
COMMD1-202ENST00000427417 GNAI1P63096 354 aa13.22□□□□□ -0.29
COMMD1-202ENST00000427417 HTRA3P83110 453 aa13.22□□□□□ -0.29
COMMD1-202ENST00000427417 ERFEQ4G0M1 354 aa13.22□□□□□ -0.29
COMMD1-202ENST00000427417 SUSD4Q5VX71 490 aa13.22□□□□□ -0.29
COMMD1-202ENST00000427417 DPY19L2Q6NUT2 758 aa13.22□□□□□ -0.29
COMMD1-202ENST00000427417 COPS6Q7L5N1 327 aa13.22□□□□□ -0.29
COMMD1-202ENST00000427417 SLC51AQ86UW1 340 aa13.22□□□□□ -0.29
COMMD1-202ENST00000427417 RPGRQ92834 1020 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms