RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 TTLL7Q6ZT98 887 aa19.63■□□□□ 0.73
COL11A1-204ENST00000427239 PLBD2Q8NHP8 589 aa19.63■□□□□ 0.73
COL11A1-204ENST00000427239 NARFQ9UHQ1 456 aa19.63■□□□□ 0.73
COL11A1-204ENST00000427239 NUP188Q5SRE5 1749 aa19.63■□□□□ 0.73
COL11A1-204ENST00000427239 RIC3Q7Z5B4 369 aa19.62■□□□□ 0.73
COL11A1-204ENST00000427239 PI4KAP2A4QPH2 592 aa19.62■□□□□ 0.73
COL11A1-204ENST00000427239 ZKSCAN2Q63HK3 967 aa19.62■□□□□ 0.73
COL11A1-204ENST00000427239 PI4KAP1Q8N8J0 262 aa19.62■□□□□ 0.73
COL11A1-204ENST00000427239 API5Q9BZZ5 524 aaKnown RBP19.62■□□□□ 0.73
COL11A1-204ENST00000427239 MAP3K15Q6ZN16 1313 aa19.62■□□□□ 0.73
COL11A1-204ENST00000427239 CLEC4GQ6UXB4 293 aa19.61■□□□□ 0.73
COL11A1-204ENST00000427239 ATF7IPQ6VMQ6 1270 aa19.61■□□□□ 0.73
COL11A1-204ENST00000427239 SMIM5Q71RC9 77 aa19.61■□□□□ 0.73
COL11A1-204ENST00000427239 PNPLA7Q6ZV29 1317 aa19.6■□□□□ 0.73
COL11A1-204ENST00000427239 UBR3Q6ZT12 1888 aa19.6■□□□□ 0.73
COL11A1-204ENST00000427239 CAMTA2O94983 1202 aa19.59■□□□□ 0.73
COL11A1-204ENST00000427239 MS4A1P11836 297 aa19.59■□□□□ 0.73
COL11A1-204ENST00000427239 COL23A1Q86Y22 540 aaPredicted RBP19.59■□□□□ 0.73
COL11A1-204ENST00000427239 ZBTB3Q9H5J0 574 aa19.59■□□□□ 0.73
COL11A1-204ENST00000427239 ZNF652Q9Y2D9 606 aa19.59■□□□□ 0.73
COL11A1-204ENST00000427239 USP42Q9H9J4 1324 aaKnown RBP19.59■□□□□ 0.73
COL11A1-204ENST00000427239 GIGYF2Q6Y7W6 1299 aaKnown RBP19.59■□□□□ 0.73
COL11A1-204ENST00000427239 MAP3K2Q9Y2U5 619 aa19.59■□□□□ 0.73
COL11A1-204ENST00000427239 MSH5O43196 834 aa19.58■□□□□ 0.72
COL11A1-204ENST00000427239 TRIM27P14373 513 aa19.58■□□□□ 0.72
COL11A1-204ENST00000427239 DNAAF4Q8WXU2 420 aa19.58■□□□□ 0.72
COL11A1-204ENST00000427239 HSP90AB3PQ58FF7 597 aa19.57■□□□□ 0.72
COL11A1-204ENST00000427239 USPL1Q5W0Q7 1092 aa19.57■□□□□ 0.72
COL11A1-204ENST00000427239 SUPT16HQ9Y5B9 1047 aaKnown RBP19.57■□□□□ 0.72
COL11A1-204ENST00000427239 ADCY9O60503 1353 aa19.57■□□□□ 0.72
COL11A1-204ENST00000427239 RNF123Q5XPI4 1314 aa19.57■□□□□ 0.72
COL11A1-204ENST00000427239 NEXNQ0ZGT2 675 aa19.56■□□□□ 0.72
COL11A1-204ENST00000427239 METTL22Q9BUU2 404 aaPredicted RBP19.56■□□□□ 0.72
COL11A1-204ENST00000427239 RRP1P56182 461 aaKnown RBP19.56■□□□□ 0.72
COL11A1-204ENST00000427239 TCIRG1Q13488 830 aa19.56■□□□□ 0.72
COL11A1-204ENST00000427239 HLFQ16534 295 aa19.56■□□□□ 0.72
COL11A1-204ENST00000427239 SLC16A10Q8TF71 515 aa19.56■□□□□ 0.72
COL11A1-204ENST00000427239 SRP68Q9UHB9 627 aaKnown RBP19.56■□□□□ 0.72
COL11A1-204ENST00000427239 F6X3S4 739 aa19.55■□□□□ 0.72
COL11A1-204ENST00000427239 PLIN1O60240 522 aa19.55■□□□□ 0.72
COL11A1-204ENST00000427239 GYS1P13807 737 aa19.55■□□□□ 0.72
COL11A1-204ENST00000427239 PDE3AQ14432 1141 aa19.55■□□□□ 0.72
COL11A1-204ENST00000427239 NLGN1Q8N2Q7 840 aa19.55■□□□□ 0.72
COL11A1-204ENST00000427239 R3HDM1Q15032 1099 aaKnown RBP19.54■□□□□ 0.72
COL11A1-204ENST00000427239 SLC4A10Q6U841 1118 aa19.54■□□□□ 0.72
COL11A1-204ENST00000427239 FTSJ3Q8IY81 847 aaKnown RBP19.54■□□□□ 0.72
COL11A1-204ENST00000427239 DZIP1LQ8IYY4 767 aaKnown RBP19.54■□□□□ 0.72
COL11A1-204ENST00000427239 BCL2L12Q9HB09 334 aa19.54■□□□□ 0.72
COL11A1-204ENST00000427239 TRIM28Q13263 835 aaKnown RBP19.54■□□□□ 0.72
COL11A1-204ENST00000427239 LINS1Q8NG48 757 aa19.54■□□□□ 0.72
COL11A1-204ENST00000427239 CCT4P50991 539 aaKnown RBP19.53■□□□□ 0.72
COL11A1-204ENST00000427239 CLUAP1Q96AJ1 413 aa19.53■□□□□ 0.72
COL11A1-204ENST00000427239 MYD88Q99836 296 aa19.53■□□□□ 0.72
COL11A1-204ENST00000427239 QSER1Q2KHR3 1735 aa19.53■□□□□ 0.72
COL11A1-204ENST00000427239 ABCC4O15439 1325 aa19.52■□□□□ 0.72
COL11A1-204ENST00000427239 BEND3Q5T5X7 828 aa19.52■□□□□ 0.72
COL11A1-204ENST00000427239 INTS3Q68E01 1043 aaKnown RBP19.52■□□□□ 0.72
COL11A1-204ENST00000427239 ZNF34Q8IZ26 560 aa19.52■□□□□ 0.72
COL11A1-204ENST00000427239 FKBP8Q14318 412 aa19.51■□□□□ 0.71
COL11A1-204ENST00000427239 SETDB2Q96T68 719 aa19.51■□□□□ 0.71
COL11A1-204ENST00000427239 ISCA1Q9BUE6 129 aa19.51■□□□□ 0.71
COL11A1-204ENST00000427239 SRCIN1Q9C0H9 1055 aa19.51■□□□□ 0.71
COL11A1-204ENST00000427239 CCDC191Q8NCU4 936 aa19.51■□□□□ 0.71
COL11A1-204ENST00000427239 NIP7Q9Y221 180 aaKnown RBP eCLIP19.51■□□□□ 0.71
COL11A1-204ENST00000427239 ATP10DQ9P241 1426 aa19.5■□□□□ 0.71
COL11A1-204ENST00000427239 ALDH1L1O75891 902 aa19.5■□□□□ 0.71
COL11A1-204ENST00000427239 PARP10Q53GL7 1025 aa19.5■□□□□ 0.71
COL11A1-204ENST00000427239 TUBGCP6Q96RT7 1819 aa19.49■□□□□ 0.71
COL11A1-204ENST00000427239 PXDNLA1KZ92 1463 aa19.49■□□□□ 0.71
COL11A1-204ENST00000427239 C4AP0C0L4 1744 aa19.49■□□□□ 0.71
COL11A1-204ENST00000427239 ATP5J2-PTCD1G3V325 749 aa19.49■□□□□ 0.71
COL11A1-204ENST00000427239 IGKV5-2P06315 115 aa19.49■□□□□ 0.71
COL11A1-204ENST00000427239 TM4SF1P30408 202 aa19.49■□□□□ 0.71
COL11A1-204ENST00000427239 TBC1D9BQ66K14 1250 aa19.49■□□□□ 0.71
COL11A1-204ENST00000427239 PDGFDQ9GZP0 370 aaPredicted RBP19.49■□□□□ 0.71
COL11A1-204ENST00000427239 TNNQ9UQP3 1299 aa19.49■□□□□ 0.71
COL11A1-204ENST00000427239 NEURL1BA8MQ27 555 aa19.48■□□□□ 0.71
COL11A1-204ENST00000427239 IBTKQ9P2D0 1353 aaPredicted RBP19.48■□□□□ 0.71
COL11A1-204ENST00000427239 RLBP1P12271 317 aa19.48■□□□□ 0.71
COL11A1-204ENST00000427239 GPTP24298 496 aa19.48■□□□□ 0.71
COL11A1-204ENST00000427239 CWF19L2Q2TBE0 894 aaKnown RBP19.48■□□□□ 0.71
COL11A1-204ENST00000427239 NLRP10Q86W26 655 aa19.48■□□□□ 0.71
COL11A1-204ENST00000427239 PANK1Q8TE04 598 aa19.48■□□□□ 0.71
COL11A1-204ENST00000427239 CWC25Q9NXE8 425 aaPredicted RBP19.48■□□□□ 0.71
COL11A1-204ENST00000427239 PSDA5PKW4 1024 aaPredicted RBP19.47■□□□□ 0.71
COL11A1-204ENST00000427239 NFIXQ14938 502 aa19.47■□□□□ 0.71
COL11A1-204ENST00000427239 BICDL1Q6ZP65 573 aa19.47■□□□□ 0.71
COL11A1-204ENST00000427239 PPP1R42Q7Z4L9 355 aa19.47■□□□□ 0.71
COL11A1-204ENST00000427239 TMEM57Q8N5G2 664 aa19.47■□□□□ 0.71
COL11A1-204ENST00000427239 SCN7AQ01118 1682 aa19.47■□□□□ 0.71
COL11A1-204ENST00000427239 BCORQ6W2J9 1755 aa19.46■□□□□ 0.71
COL11A1-204ENST00000427239 ARFGEF2Q9Y6D5 1785 aa19.46■□□□□ 0.71
COL11A1-204ENST00000427239 NUP98P52948 1817 aa19.46■□□□□ 0.71
COL11A1-204ENST00000427239 GCKRQ14397 625 aa19.46■□□□□ 0.71
COL11A1-204ENST00000427239 C20orf194Q5TEA3 1177 aa19.46■□□□□ 0.71
COL11A1-204ENST00000427239 MTFR1LQ9H019 292 aa19.46■□□□□ 0.71
COL11A1-204ENST00000427239 CARMIL3Q8ND23 1372 aa19.45■□□□□ 0.7
COL11A1-204ENST00000427239 TPTE2Q6XPS3 522 aa19.45■□□□□ 0.7
COL11A1-204ENST00000427239 ITPRIPQ8IWB1 547 aa19.45■□□□□ 0.7
COL11A1-204ENST00000427239 NYXQ9GZU5 481 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms