RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 ZNF496Q96IT1 587 aaPredicted RBP23.42■■□□□ 1.34
SNX17-202ENST00000427123 GLI3P10071 1580 aa23.42■■□□□ 1.34
SNX17-202ENST00000427123 GOLGA6L3A6NEY3 463 aa23.42■■□□□ 1.34
SNX17-202ENST00000427123 CYP2E1P05181 493 aaPredicted RBP23.42■■□□□ 1.34
SNX17-202ENST00000427123 SNRPA1P09661 255 aaKnown RBP23.42■■□□□ 1.34
SNX17-202ENST00000427123 NEXNQ0ZGT2 675 aa23.42■■□□□ 1.34
SNX17-202ENST00000427123 PALD1Q9ULE6 856 aa23.42■■□□□ 1.34
SNX17-202ENST00000427123 HSPA2P54652 639 aa23.41■■□□□ 1.34
SNX17-202ENST00000427123 GPATCH3Q96I76 525 aa23.41■■□□□ 1.34
SNX17-202ENST00000427123 IGKV5-2P06315 115 aa23.4■■□□□ 1.34
SNX17-202ENST00000427123 BRINP3Q76B58 766 aa23.4■■□□□ 1.34
SNX17-202ENST00000427123 XAGE3Q8WTP9 111 aa23.4■■□□□ 1.34
SNX17-202ENST00000427123 MAP4K4O95819 1239 aaPredicted RBP23.4■■□□□ 1.34
SNX17-202ENST00000427123 MYL6BP14649 208 aa23.4■■□□□ 1.34
SNX17-202ENST00000427123 KAZALD1Q96I82 304 aa23.4■■□□□ 1.34
SNX17-202ENST00000427123 FMNL2Q96PY5 1086 aa23.4■■□□□ 1.34
SNX17-202ENST00000427123 ARFGEF2Q9Y6D5 1785 aa23.4■■□□□ 1.34
SNX17-202ENST00000427123 AFDNP55196 1824 aaKnown RBP23.39■■□□□ 1.34
SNX17-202ENST00000427123 SGSM2O43147 1006 aa23.39■■□□□ 1.34
SNX17-202ENST00000427123 BAG4O95429 457 aaKnown RBP23.39■■□□□ 1.34
SNX17-202ENST00000427123 BICC1Q9H694 974 aaKnown RBP23.39■■□□□ 1.34
SNX17-202ENST00000427123 RAD50Q92878 1312 aa23.39■■□□□ 1.33
SNX17-202ENST00000427123 NEURL1BA8MQ27 555 aa23.38■■□□□ 1.33
SNX17-202ENST00000427123 HSPA4P34932 840 aa23.38■■□□□ 1.33
SNX17-202ENST00000427123 METTL22Q9BUU2 404 aaPredicted RBP23.38■■□□□ 1.33
SNX17-202ENST00000427123 IL25Q9H293 177 aa23.38■■□□□ 1.33
SNX17-202ENST00000427123 ECHDC1Q9NTX5 307 aa23.38■■□□□ 1.33
SNX17-202ENST00000427123 PA2G4Q9UQ80 394 aaKnown RBP23.38■■□□□ 1.33
SNX17-202ENST00000427123 ABCA3Q99758 1704 aa23.38■■□□□ 1.33
SNX17-202ENST00000427123 IFIT2P09913 472 aaKnown RBP23.37■■□□□ 1.33
SNX17-202ENST00000427123 CABP4P57796 275 aa23.37■■□□□ 1.33
SNX17-202ENST00000427123 COPS6Q7L5N1 327 aa23.37■■□□□ 1.33
SNX17-202ENST00000427123 LRP10Q7Z4F1 713 aa23.37■■□□□ 1.33
SNX17-202ENST00000427123 ZGPATQ8N5A5 531 aaKnown RBP23.37■■□□□ 1.33
SNX17-202ENST00000427123 TMX3Q96JJ7 454 aa23.37■■□□□ 1.33
SNX17-202ENST00000427123 ISY1Q9ULR0 285 aaKnown RBP23.37■■□□□ 1.33
SNX17-202ENST00000427123 STRCQ7RTU9 1775 aa23.37■■□□□ 1.33
SNX17-202ENST00000427123 GCKRQ14397 625 aa23.37■■□□□ 1.33
SNX17-202ENST00000427123 WDR17Q8IZU2 1322 aa23.36■■□□□ 1.33
SNX17-202ENST00000427123 G3BP1Q13283 466 aaKnown RBP eCLIP23.35■■□□□ 1.33
SNX17-202ENST00000427123 MYD88Q99836 296 aa23.35■■□□□ 1.33
SNX17-202ENST00000427123 UBR2Q8IWV8 1755 aa23.35■■□□□ 1.33
SNX17-202ENST00000427123 CUL4AQ13619 759 aa23.35■■□□□ 1.33
SNX17-202ENST00000427123 PCDH11XQ9BZA7 1347 aa23.34■■□□□ 1.33
SNX17-202ENST00000427123 PCDH11YQ9BZA8 1340 aa23.34■■□□□ 1.33
SNX17-202ENST00000427123 ANKRD13DQ6ZTN6 518 aa23.34■■□□□ 1.33
SNX17-202ENST00000427123 AACSQ86V21 672 aa23.34■■□□□ 1.33
SNX17-202ENST00000427123 LSG1Q9H089 658 aaKnown RBP23.34■■□□□ 1.33
SNX17-202ENST00000427123 USP16Q9Y5T5 823 aa23.34■■□□□ 1.33
SNX17-202ENST00000427123 COL5A2P05997 1499 aaPredicted RBP23.34■■□□□ 1.33
SNX17-202ENST00000427123 PRDM11Q9NQV5 511 aa23.33■■□□□ 1.33
SNX17-202ENST00000427123 PAPPAQ13219 1627 aa23.33■■□□□ 1.33
SNX17-202ENST00000427123 SOS2Q07890 1332 aaPredicted RBP23.33■■□□□ 1.33
SNX17-202ENST00000427123 RUFY2Q8WXA3 655 aa23.33■■□□□ 1.32
SNX17-202ENST00000427123 DIAPH3Q9NSV4 1193 aa23.33■■□□□ 1.32
SNX17-202ENST00000427123 COL15A1P39059 1388 aa23.32■■□□□ 1.32
SNX17-202ENST00000427123 SASH1O94885 1247 aa23.32■■□□□ 1.32
SNX17-202ENST00000427123 KIAA1211Q6ZU35 1233 aa23.32■■□□□ 1.32
SNX17-202ENST00000427123 INTS4Q96HW7 963 aaKnown RBP23.32■■□□□ 1.32
SNX17-202ENST00000427123 PKP1Q13835 747 aa23.32■■□□□ 1.32
SNX17-202ENST00000427123 EVI5LQ96CN4 794 aa23.32■■□□□ 1.32
SNX17-202ENST00000427123 ERBB4Q15303 1308 aa23.31■■□□□ 1.32
SNX17-202ENST00000427123 CWC27Q6UX04 472 aaKnown RBP23.31■■□□□ 1.32
SNX17-202ENST00000427123 XRCC6P12956 609 aaKnown RBP eCLIP23.3■■□□□ 1.32
SNX17-202ENST00000427123 MRE11P49959 708 aa23.3■■□□□ 1.32
SNX17-202ENST00000427123 SHANK3Q9BYB0 1731 aa23.3■■□□□ 1.32
SNX17-202ENST00000427123 KLHL40Q2TBA0 621 aa23.3■■□□□ 1.32
SNX17-202ENST00000427123 TOM1L2Q6ZVM7 507 aa23.3■■□□□ 1.32
SNX17-202ENST00000427123 ZCRB1Q8TBF4 217 aaKnown RBP23.3■■□□□ 1.32
SNX17-202ENST00000427123 UPF3BQ9BZI7 483 aaKnown RBP23.29■■□□□ 1.32
SNX17-202ENST00000427123 MCTP1Q6DN14 999 aa23.28■■□□□ 1.32
SNX17-202ENST00000427123 EAF2Q96CJ1 260 aaPredicted RBP23.28■■□□□ 1.32
SNX17-202ENST00000427123 ZDHHC9Q9Y397 364 aa23.28■■□□□ 1.32
SNX17-202ENST00000427123 SNX14Q9Y5W7 946 aa23.28■■□□□ 1.32
SNX17-202ENST00000427123 NUP188Q5SRE5 1749 aa23.28■■□□□ 1.32
SNX17-202ENST00000427123 SLAIN2Q9P270 581 aa23.28■■□□□ 1.32
SNX17-202ENST00000427123 KCPQ6ZWJ8 1503 aa23.27■■□□□ 1.32
SNX17-202ENST00000427123 ERVV-2B6SEH9 535 aa23.27■■□□□ 1.32
SNX17-202ENST00000427123 HIP1O00291 1037 aa23.27■■□□□ 1.32
SNX17-202ENST00000427123 EPHA10Q5JZY3 1008 aa23.27■■□□□ 1.32
SNX17-202ENST00000427123 PLBD2Q8NHP8 589 aa23.27■■□□□ 1.32
SNX17-202ENST00000427123 ARXQ96QS3 562 aa23.27■■□□□ 1.32
SNX17-202ENST00000427123 PIP4K2AP48426 406 aaPredicted RBP23.26■■□□□ 1.31
SNX17-202ENST00000427123 SIL1Q9H173 461 aa23.26■■□□□ 1.31
SNX17-202ENST00000427123 COPRSQ9NQ92 184 aa23.26■■□□□ 1.31
SNX17-202ENST00000427123 DDX49Q9Y6V7 483 aaKnown RBP23.26■■□□□ 1.31
SNX17-202ENST00000427123 NHSL1Q5SYE7 1610 aa23.25■■□□□ 1.31
SNX17-202ENST00000427123 RABL6Q3YEC7 729 aaPredicted RBP23.25■■□□□ 1.31
SNX17-202ENST00000427123 GRPEL1Q9HAV7 217 aa23.25■■□□□ 1.31
SNX17-202ENST00000427123 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.25■■□□□ 1.31
SNX17-202ENST00000427123 NKX1-1Q15270 411 aaPredicted RBP23.25■■□□□ 1.31
SNX17-202ENST00000427123 NOL8Q76FK4 1167 aaKnown RBP23.25■■□□□ 1.31
SNX17-202ENST00000427123 CARD10Q9BWT7 1032 aa23.25■■□□□ 1.31
SNX17-202ENST00000427123 CCDC8Q9H0W5 538 aaPredicted RBP23.25■■□□□ 1.31
SNX17-202ENST00000427123 LMBRD1Q9NUN5 540 aa23.24■■□□□ 1.31
SNX17-202ENST00000427123 IL2RBP14784 551 aa23.23■■□□□ 1.31
SNX17-202ENST00000427123 UBE3BQ7Z3V4 1068 aa23.23■■□□□ 1.31
SNX17-202ENST00000427123 TTC14Q96N46 770 aa23.23■■□□□ 1.31
SNX17-202ENST00000427123 TLR7Q9NYK1 1049 aaKnown RBP23.23■■□□□ 1.31
SNX17-202ENST00000427123 BRD1O95696 1058 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms