RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 TEX2Q8IWB9 1127 aa15.69■□□□□ 0.1
COL12A1-205ENST00000425443 PDLIM2Q96JY6 352 aa15.69■□□□□ 0.1
COL12A1-205ENST00000425443 MAP3K2Q9Y2U5 619 aa15.69■□□□□ 0.1
COL12A1-205ENST00000425443 BRD1O95696 1058 aa15.68■□□□□ 0.1
COL12A1-205ENST00000425443 HSP90AB4PQ58FF6 505 aa15.68■□□□□ 0.1
COL12A1-205ENST00000425443 KIAA1211Q6ZU35 1233 aa15.68■□□□□ 0.1
COL12A1-205ENST00000425443 NFAT5O94916 1531 aa15.68■□□□□ 0.1
COL12A1-205ENST00000425443 AXIN2Q9Y2T1 843 aa15.68■□□□□ 0.1
COL12A1-205ENST00000425443 ATF3P18847 181 aa15.68■□□□□ 0.1
COL12A1-205ENST00000425443 DDX54Q8TDD1 881 aaKnown RBP15.68■□□□□ 0.1
COL12A1-205ENST00000425443 PXDNLA1KZ92 1463 aa15.67■□□□□ 0.1
COL12A1-205ENST00000425443 CUL4AQ13619 759 aa15.67■□□□□ 0.1
COL12A1-205ENST00000425443 STAP2Q9UGK3 403 aa15.67■□□□□ 0.1
COL12A1-205ENST00000425443 GADD45BO75293 160 aaPredicted RBP15.67■□□□□ 0.1
COL12A1-205ENST00000425443 LRSAM1Q6UWE0 723 aa15.66■□□□□ 0.1
COL12A1-205ENST00000425443 GIGYF1O75420 1035 aaPredicted RBP15.66■□□□□ 0.1
COL12A1-205ENST00000425443 HDAC5Q9UQL6 1122 aa15.66■□□□□ 0.1
COL12A1-205ENST00000425443 PRAMEF22A3QJZ6 481 aa15.66■□□□□ 0.1
COL12A1-205ENST00000425443 DDX58O95786 925 aaKnown RBP15.66■□□□□ 0.1
COL12A1-205ENST00000425443 MPNDQ8N594 471 aa15.66■□□□□ 0.1
COL12A1-205ENST00000425443 C19orf44Q9H6X5 657 aa15.66■□□□□ 0.1
COL12A1-205ENST00000425443 TMEM51Q9NW97 253 aa15.66■□□□□ 0.1
COL12A1-205ENST00000425443 PROSER3Q2NL68 480 aa15.65■□□□□ 0.1
COL12A1-205ENST00000425443 CNTROBQ8N137 903 aa15.65■□□□□ 0.1
COL12A1-205ENST00000425443 CLASRPQ8N2M8 674 aaKnown RBP15.65■□□□□ 0.1
COL12A1-205ENST00000425443 KCNG1Q9UIX4 513 aa15.65■□□□□ 0.1
COL12A1-205ENST00000425443 SPG7Q9UQ90 795 aa15.65■□□□□ 0.1
COL12A1-205ENST00000425443 CPA1P15085 419 aa15.65■□□□□ 0.1
COL12A1-205ENST00000425443 POLA2Q14181 598 aa15.65■□□□□ 0.1
COL12A1-205ENST00000425443 CWF19L2Q2TBE0 894 aaKnown RBP15.65■□□□□ 0.1
COL12A1-205ENST00000425443 CWC27Q6UX04 472 aaKnown RBP15.65■□□□□ 0.1
COL12A1-205ENST00000425443 USP54Q70EL1 1684 aa15.65■□□□□ 0.1
COL12A1-205ENST00000425443 RGPD2P0DJD1 1756 aa15.64■□□□□ 0.09
COL12A1-205ENST00000425443 OFD1O75665 1012 aa15.64■□□□□ 0.09
COL12A1-205ENST00000425443 MCM2P49736 904 aa15.64■□□□□ 0.09
COL12A1-205ENST00000425443 KSR2Q6VAB6 950 aa15.64■□□□□ 0.09
COL12A1-205ENST00000425443 TCHHQ07283 1943 aa15.64■□□□□ 0.09
COL12A1-205ENST00000425443 SLC39A6Q13433 755 aa15.64■□□□□ 0.09
COL12A1-205ENST00000425443 HYPKQ9NX55 129 aa15.64■□□□□ 0.09
COL12A1-205ENST00000425443 MSNP26038 577 aaKnown RBP15.63■□□□□ 0.09
COL12A1-205ENST00000425443 RIC3Q7Z5B4 369 aa15.63■□□□□ 0.09
COL12A1-205ENST00000425443 DDX17Q92841 729 aaKnown RBP15.63■□□□□ 0.09
COL12A1-205ENST00000425443 NOL7Q9UMY1 257 aaKnown RBP15.63■□□□□ 0.09
COL12A1-205ENST00000425443 AOX1Q06278 1338 aa15.63■□□□□ 0.09
COL12A1-205ENST00000425443 IFIT2P09913 472 aaKnown RBP15.63■□□□□ 0.09
COL12A1-205ENST00000425443 MYL6BP14649 208 aa15.63■□□□□ 0.09
COL12A1-205ENST00000425443 TATP17735 454 aaPredicted RBP15.63■□□□□ 0.09
COL12A1-205ENST00000425443 ADCY9O60503 1353 aa15.63■□□□□ 0.09
COL12A1-205ENST00000425443 GPATCH3Q96I76 525 aa15.62■□□□□ 0.09
COL12A1-205ENST00000425443 PXDNQ92626 1479 aa15.62■□□□□ 0.09
COL12A1-205ENST00000425443 ALDH1L1O75891 902 aa15.62■□□□□ 0.09
COL12A1-205ENST00000425443 DIAPH3Q9NSV4 1193 aa15.62■□□□□ 0.09
COL12A1-205ENST00000425443 PA2G4Q9UQ80 394 aaKnown RBP15.62■□□□□ 0.09
COL12A1-205ENST00000425443 ANAPC15P60006 121 aa15.61■□□□□ 0.09
COL12A1-205ENST00000425443 PI4K2BQ8TCG2 481 aa15.61■□□□□ 0.09
COL12A1-205ENST00000425443 RPAP1Q9BWH6 1393 aaPredicted RBP15.61■□□□□ 0.09
COL12A1-205ENST00000425443 NEXNQ0ZGT2 675 aa15.61■□□□□ 0.09
COL12A1-205ENST00000425443 CABLES1Q8TDN4 633 aa15.61■□□□□ 0.09
COL12A1-205ENST00000425443 ERBB3P21860 1342 aa15.61■□□□□ 0.09
COL12A1-205ENST00000425443 NCAPD2Q15021 1401 aa15.61■□□□□ 0.09
COL12A1-205ENST00000425443 RASEFQ8IZ41 740 aa15.61■□□□□ 0.09
COL12A1-205ENST00000425443 N4BP2Q86UW6 1770 aaPredicted RBP15.6■□□□□ 0.09
COL12A1-205ENST00000425443 USP48Q86UV5 1035 aa15.6■□□□□ 0.09
COL12A1-205ENST00000425443 TTC5Q8N0Z6 440 aa15.6■□□□□ 0.09
COL12A1-205ENST00000425443 NFATC2IPQ8NCF5 419 aa15.6■□□□□ 0.09
COL12A1-205ENST00000425443 R3HCC1Q9Y3T6 440 aaKnown RBP15.6■□□□□ 0.09
COL12A1-205ENST00000425443 GLRX3O76003 335 aaKnown RBP15.6■□□□□ 0.09
COL12A1-205ENST00000425443 HSPA4P34932 840 aa15.6■□□□□ 0.09
COL12A1-205ENST00000425443 G3BP1Q13283 466 aaKnown RBP eCLIP15.6■□□□□ 0.09
COL12A1-205ENST00000425443 FAM13BQ9NYF5 915 aa15.6■□□□□ 0.09
COL12A1-205ENST00000425443 CHRNA2Q15822 529 aa15.59■□□□□ 0.09
COL12A1-205ENST00000425443 ZNF790Q6PG37 636 aa15.59■□□□□ 0.09
COL12A1-205ENST00000425443 ERC1Q8IUD2 1116 aa15.59■□□□□ 0.09
COL12A1-205ENST00000425443 LINS1Q8NG48 757 aa15.59■□□□□ 0.09
COL12A1-205ENST00000425443 DDX21Q9NR30 783 aaKnown RBP eCLIP15.59■□□□□ 0.09
COL12A1-205ENST00000425443 ZNF142P52746 1687 aaPredicted RBP15.59■□□□□ 0.09
COL12A1-205ENST00000425443 GRM8O00222 908 aa15.59■□□□□ 0.09
COL12A1-205ENST00000425443 AACSQ86V21 672 aa15.59■□□□□ 0.09
COL12A1-205ENST00000425443 IL17RAQ96F46 866 aa15.59■□□□□ 0.09
COL12A1-205ENST00000425443 INTS4Q96HW7 963 aaKnown RBP15.59■□□□□ 0.09
COL12A1-205ENST00000425443 SIL1Q9H173 461 aa15.59■□□□□ 0.09
COL12A1-205ENST00000425443 C1orf167Q5SNV9 1468 aa15.58■□□□□ 0.09
COL12A1-205ENST00000425443 ZNF500O60304 480 aaPredicted RBP15.58■□□□□ 0.08
COL12A1-205ENST00000425443 TPM2P07951 284 aa15.58■□□□□ 0.08
COL12A1-205ENST00000425443 RUFY2Q8WXA3 655 aa15.58■□□□□ 0.08
COL12A1-205ENST00000425443 SNX14Q9Y5W7 946 aa15.58■□□□□ 0.08
COL12A1-205ENST00000425443 HS1BP3Q53T59 392 aa15.58■□□□□ 0.08
COL12A1-205ENST00000425443 ECHDC1Q9NTX5 307 aa15.58■□□□□ 0.08
COL12A1-205ENST00000425443 ZKSCAN5Q9Y2L8 839 aa15.58■□□□□ 0.08
COL12A1-205ENST00000425443 LARGE1O95461 756 aa15.57■□□□□ 0.08
COL12A1-205ENST00000425443 SLC52A2Q9HAB3 445 aa15.57■□□□□ 0.08
COL12A1-205ENST00000425443 COL9A3Q14050 684 aaPredicted RBP15.57■□□□□ 0.08
COL12A1-205ENST00000425443 CNPY2Q9Y2B0 182 aa15.57■□□□□ 0.08
COL12A1-205ENST00000425443 TTC41PQ6P2S7 1318 aa15.57■□□□□ 0.08
COL12A1-205ENST00000425443 MED1Q15648 1581 aaPredicted RBP15.57■□□□□ 0.08
COL12A1-205ENST00000425443 SGSM2O43147 1006 aa15.57■□□□□ 0.08
COL12A1-205ENST00000425443 MBD3O95983 291 aa15.57■□□□□ 0.08
COL12A1-205ENST00000425443 KCNJ4P48050 445 aa15.57■□□□□ 0.08
COL12A1-205ENST00000425443 LARP1Q6PKG0 1096 aaKnown RBP15.57■□□□□ 0.08
COL12A1-205ENST00000425443 CERS3Q8IU89 383 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms