RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 NBPF15Q8N660 670 aa20.08■□□□□ 0.81
ATG4B-209ENST00000425239 C7orf43Q8WVR3 580 aa20.08■□□□□ 0.81
ATG4B-209ENST00000425239 LTBP3Q9NS15 1303 aa20.07■□□□□ 0.8
ATG4B-209ENST00000425239 KLRG2A4D1S0 409 aaPredicted RBP20.07■□□□□ 0.8
ATG4B-209ENST00000425239 DCTN1Q14203 1278 aa20.07■□□□□ 0.8
ATG4B-209ENST00000425239 CFAP53Q96M91 514 aa20.07■□□□□ 0.8
ATG4B-209ENST00000425239 HTATSF1O43719 755 aaKnown RBP20.06■□□□□ 0.8
ATG4B-209ENST00000425239 SNRPA1P09661 255 aaKnown RBP20.06■□□□□ 0.8
ATG4B-209ENST00000425239 STYK1Q6J9G0 422 aa20.06■□□□□ 0.8
ATG4B-209ENST00000425239 CNBD1Q8NA66 436 aa20.06■□□□□ 0.8
ATG4B-209ENST00000425239 ZNF219Q9P2Y4 722 aaPredicted RBP20.06■□□□□ 0.8
ATG4B-209ENST00000425239 U2AF1L5P0DN76 240 aaPredicted RBP20.05■□□□□ 0.8
ATG4B-209ENST00000425239 U2AF1Q01081 240 aaKnown RBP eCLIP20.05■□□□□ 0.8
ATG4B-209ENST00000425239 NUDCQ9Y266 331 aa20.05■□□□□ 0.8
ATG4B-209ENST00000425239 ARFGEF2Q9Y6D5 1785 aa20.05■□□□□ 0.8
ATG4B-209ENST00000425239 PRPF40BQ6NWY9 871 aaKnown RBP20.04■□□□□ 0.8
ATG4B-209ENST00000425239 CNKSR1Q969H4 720 aa20.04■□□□□ 0.8
ATG4B-209ENST00000425239 MASTLQ96GX5 879 aa20.04■□□□□ 0.8
ATG4B-209ENST00000425239 RGL2O15211 777 aa20.03■□□□□ 0.8
ATG4B-209ENST00000425239 ERFEQ4G0M1 354 aa20.03■□□□□ 0.8
ATG4B-209ENST00000425239 DPY19L2Q6NUT2 758 aa20.03■□□□□ 0.8
ATG4B-209ENST00000425239 CACNA1SQ13698 1873 aa20.01■□□□□ 0.79
ATG4B-209ENST00000425239 ST5P78524 1137 aa20.01■□□□□ 0.79
ATG4B-209ENST00000425239 TAF7Q15545 349 aaPredicted RBP20.01■□□□□ 0.79
ATG4B-209ENST00000425239 COL13A1Q5TAT6 717 aaPredicted RBP20.01■□□□□ 0.79
ATG4B-209ENST00000425239 RTF1Q92541 710 aaKnown RBP20.01■□□□□ 0.79
ATG4B-209ENST00000425239 TAOK3Q9H2K8 898 aa20.01■□□□□ 0.79
ATG4B-209ENST00000425239 MIS18AQ9NYP9 233 aa20.01■□□□□ 0.79
ATG4B-209ENST00000425239 HLFQ16534 295 aa20■□□□□ 0.79
ATG4B-209ENST00000425239 DDNO94850 711 aaPredicted RBP19.99■□□□□ 0.79
ATG4B-209ENST00000425239 POTEIP0CG38 1075 aa19.99■□□□□ 0.79
ATG4B-209ENST00000425239 POTEJP0CG39 1038 aa19.99■□□□□ 0.79
ATG4B-209ENST00000425239 NPM2Q86SE8 214 aaKnown RBP19.99■□□□□ 0.79
ATG4B-209ENST00000425239 NBPF5PQ86XG9 351 aaPredicted RBP19.99■□□□□ 0.79
ATG4B-209ENST00000425239 PLEKHF1Q96S99 279 aa19.99■□□□□ 0.79
ATG4B-209ENST00000425239 DLG5Q8TDM6 1919 aa19.98■□□□□ 0.79
ATG4B-209ENST00000425239 NPR1P16066 1061 aa19.97■□□□□ 0.79
ATG4B-209ENST00000425239 SOGA3Q5TF21 947 aa19.97■□□□□ 0.79
ATG4B-209ENST00000425239 OLFM4Q6UX06 510 aa19.97■□□□□ 0.79
ATG4B-209ENST00000425239 TPTE2Q6XPS3 522 aa19.97■□□□□ 0.79
ATG4B-209ENST00000425239 NIP7Q9Y221 180 aaKnown RBP eCLIP19.97■□□□□ 0.79
ATG4B-209ENST00000425239 ZNF652Q9Y2D9 606 aa19.97■□□□□ 0.79
ATG4B-209ENST00000425239 SNED1Q8TER0 1413 aa19.96■□□□□ 0.79
ATG4B-209ENST00000425239 KDM3BQ7LBC6 1761 aa19.95■□□□□ 0.78
ATG4B-209ENST00000425239 L3MBTL3Q96JM7 780 aaPredicted RBP19.95■□□□□ 0.78
ATG4B-209ENST00000425239 NPHP1O15259 732 aa19.94■□□□□ 0.78
ATG4B-209ENST00000425239 EIF4A1P60842 406 aaKnown RBP19.94■□□□□ 0.78
ATG4B-209ENST00000425239 LAMB4A4D0S4 1761 aa19.93■□□□□ 0.78
ATG4B-209ENST00000425239 CRY2Q49AN0 593 aa19.93■□□□□ 0.78
ATG4B-209ENST00000425239 CCDC93Q567U6 631 aa19.93■□□□□ 0.78
ATG4B-209ENST00000425239 CHADLQ6NUI6 762 aa19.93■□□□□ 0.78
ATG4B-209ENST00000425239 NUP98P52948 1817 aa19.92■□□□□ 0.78
ATG4B-209ENST00000425239 ERVV-1B6SEH8 477 aa19.92■□□□□ 0.78
ATG4B-209ENST00000425239 FKBP4Q02790 459 aaKnown RBP eCLIP19.92■□□□□ 0.78
ATG4B-209ENST00000425239 SCN4AP35499 1836 aa19.92■□□□□ 0.78
ATG4B-209ENST00000425239 FAM177BA6PVY3 158 aa19.91■□□□□ 0.78
ATG4B-209ENST00000425239 TTLL7Q6ZT98 887 aa19.91■□□□□ 0.78
ATG4B-209ENST00000425239 ZNF277Q9NRM2 450 aaPredicted RBP19.91■□□□□ 0.78
ATG4B-209ENST00000425239 PASKQ96RG2 1323 aa19.91■□□□□ 0.78
ATG4B-209ENST00000425239 ITGBL1O95965 494 aaPredicted RBP19.9■□□□□ 0.78
ATG4B-209ENST00000425239 THUMPD2Q9BTF0 503 aaKnown RBP19.9■□□□□ 0.78
ATG4B-209ENST00000425239 TAF1DQ9H5J8 278 aaPredicted RBP19.9■□□□□ 0.78
ATG4B-209ENST00000425239 CREBZFQ9NS37 354 aa19.9■□□□□ 0.78
ATG4B-209ENST00000425239 ZNF541Q9H0D2 1346 aa19.9■□□□□ 0.78
ATG4B-209ENST00000425239 FZD9O00144 591 aa19.89■□□□□ 0.77
ATG4B-209ENST00000425239 ALDH1B1P30837 517 aa19.89■□□□□ 0.77
ATG4B-209ENST00000425239 NFE2L2Q16236 605 aa19.89■□□□□ 0.77
ATG4B-209ENST00000425239 LRP10Q7Z4F1 713 aa19.89■□□□□ 0.77
ATG4B-209ENST00000425239 RTKN2Q8IZC4 609 aa19.89■□□□□ 0.77
ATG4B-209ENST00000425239 PNISRQ8TF01 805 aaKnown RBP19.89■□□□□ 0.77
ATG4B-209ENST00000425239 ABCC12Q96J65 1359 aa19.89■□□□□ 0.77
ATG4B-209ENST00000425239 MAP3K15Q6ZN16 1313 aa19.88■□□□□ 0.77
ATG4B-209ENST00000425239 UBN2Q6ZU65 1347 aa19.88■□□□□ 0.77
ATG4B-209ENST00000425239 HSPA1AP0DMV8 641 aaKnown RBP19.88■□□□□ 0.77
ATG4B-209ENST00000425239 HSPA1BP0DMV9 641 aaKnown RBP19.88■□□□□ 0.77
ATG4B-209ENST00000425239 NUTM1Q86Y26 1132 aa19.88■□□□□ 0.77
ATG4B-209ENST00000425239 ADAMTSL1Q8N6G6 1762 aa19.88■□□□□ 0.77
ATG4B-209ENST00000425239 HOXA10P31260 410 aaPredicted RBP19.87■□□□□ 0.77
ATG4B-209ENST00000425239 ZNF34Q8IZ26 560 aa19.87■□□□□ 0.77
ATG4B-209ENST00000425239 SYNE4Q8N205 404 aa19.87■□□□□ 0.77
ATG4B-209ENST00000425239 NGEFQ8N5V2 710 aa19.87■□□□□ 0.77
ATG4B-209ENST00000425239 COL4A5P29400 1685 aa19.87■□□□□ 0.77
ATG4B-209ENST00000425239 IQCA1LA6NCM1 817 aa19.86■□□□□ 0.77
ATG4B-209ENST00000425239 PDIA6Q15084 440 aa19.86■□□□□ 0.77
ATG4B-209ENST00000425239 SUSD4Q5VX71 490 aa19.86■□□□□ 0.77
ATG4B-209ENST00000425239 SLC51AQ86UW1 340 aa19.86■□□□□ 0.77
ATG4B-209ENST00000425239 LDHDQ86WU2 507 aa19.86■□□□□ 0.77
ATG4B-209ENST00000425239 PSMD1Q99460 953 aa19.86■□□□□ 0.77
ATG4B-209ENST00000425239 RRP7AQ9Y3A4 280 aaKnown RBP19.86■□□□□ 0.77
ATG4B-209ENST00000425239 RIC1Q4ADV7 1423 aa19.85■□□□□ 0.77
ATG4B-209ENST00000425239 IARSP41252 1262 aaKnown RBP19.85■□□□□ 0.77
ATG4B-209ENST00000425239 NYXQ9GZU5 481 aa19.85■□□□□ 0.77
ATG4B-209ENST00000425239 IBTKQ9P2D0 1353 aaPredicted RBP19.84■□□□□ 0.77
ATG4B-209ENST00000425239 C3orf67Q6ZVT6 689 aa19.84■□□□□ 0.77
ATG4B-209ENST00000425239 NTSR2O95665 410 aa19.83■□□□□ 0.77
ATG4B-209ENST00000425239 MYL6BP14649 208 aa19.83■□□□□ 0.77
ATG4B-209ENST00000425239 GTF2E1P29083 439 aaPredicted RBP19.83■□□□□ 0.77
ATG4B-209ENST00000425239 GIGYF2Q6Y7W6 1299 aaKnown RBP19.83■□□□□ 0.77
ATG4B-209ENST00000425239 MKRN1Q9UHC7 482 aaKnown RBP19.83■□□□□ 0.77
ATG4B-209ENST00000425239 GPTP24298 496 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms