RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 NUTM2AQ8IVF1 878 aaPredicted RBP12.03□□□□□ -0.48
VPS37A-202ENST00000425020 SYT1P21579 422 aa12.03□□□□□ -0.48
VPS37A-202ENST00000425020 NMIQ13287 307 aaPredicted RBP12.03□□□□□ -0.48
VPS37A-202ENST00000425020 KCNH5Q8NCM2 988 aa12.03□□□□□ -0.48
VPS37A-202ENST00000425020 EVI5LQ96CN4 794 aa12.03□□□□□ -0.48
VPS37A-202ENST00000425020 IQSEC3Q9UPP2 1182 aaPredicted RBP12.03□□□□□ -0.48
VPS37A-202ENST00000425020 USP19O94966 1318 aa12.03□□□□□ -0.48
VPS37A-202ENST00000425020 MINDY4BA8MYZ0 360 aa12.03□□□□□ -0.48
VPS37A-202ENST00000425020 CHL1O00533 1208 aa12.03□□□□□ -0.48
VPS37A-202ENST00000425020 LMBR1LQ6UX01 489 aa12.03□□□□□ -0.48
VPS37A-202ENST00000425020 PLEKHF1Q96S99 279 aa12.03□□□□□ -0.48
VPS37A-202ENST00000425020 ZHX1Q9UKY1 873 aaPredicted RBP12.03□□□□□ -0.48
VPS37A-202ENST00000425020 A0A0U1RQG5 324 aaPredicted RBP12.02□□□□□ -0.48
VPS37A-202ENST00000425020 CFAP100Q494V2 611 aa12.02□□□□□ -0.48
VPS37A-202ENST00000425020 ANKRD13DQ6ZTN6 518 aa12.02□□□□□ -0.48
VPS37A-202ENST00000425020 CEP57L1Q8IYX8 460 aa12.02□□□□□ -0.48
VPS37A-202ENST00000425020 CLIP2Q9UDT6 1046 aa12.02□□□□□ -0.48
VPS37A-202ENST00000425020 PIK3R4Q99570 1358 aa12.02□□□□□ -0.48
VPS37A-202ENST00000425020 TDO2P48775 406 aa12.02□□□□□ -0.49
VPS37A-202ENST00000425020 CCDC129Q6ZRS4 1044 aa12.02□□□□□ -0.49
VPS37A-202ENST00000425020 SIRT2Q8IXJ6 389 aa12.02□□□□□ -0.49
VPS37A-202ENST00000425020 FSIP1Q8NA03 581 aa12.02□□□□□ -0.49
VPS37A-202ENST00000425020 RIMS2Q9UQ26 1411 aa12.02□□□□□ -0.49
VPS37A-202ENST00000425020 UBE2HP62256 183 aa12.02□□□□□ -0.49
VPS37A-202ENST00000425020 FAM227BQ96M60 508 aa12.02□□□□□ -0.49
VPS37A-202ENST00000425020 SCAND2PQ9GZW5 306 aaPredicted RBP12.02□□□□□ -0.49
VPS37A-202ENST00000425020 TMEM63CQ9P1W3 806 aa12.02□□□□□ -0.49
VPS37A-202ENST00000425020 CCDC186Q7Z3E2 898 aa12.01□□□□□ -0.49
VPS37A-202ENST00000425020 KRT28Q7Z3Y7 464 aa12.01□□□□□ -0.49
VPS37A-202ENST00000425020 MICU3Q86XE3 530 aa12.01□□□□□ -0.49
VPS37A-202ENST00000425020 PDCL2Q8N4E4 241 aa12.01□□□□□ -0.49
VPS37A-202ENST00000425020 GOLGA6L1Q8N7Z2 621 aa12.01□□□□□ -0.49
VPS37A-202ENST00000425020 NEK1Q96PY6 1258 aa12.01□□□□□ -0.49
VPS37A-202ENST00000425020 GRM8O00222 908 aa12.01□□□□□ -0.49
VPS37A-202ENST00000425020 KRT32Q14532 448 aa12.01□□□□□ -0.49
VPS37A-202ENST00000425020 DNAJC25Q9H1X3 360 aa12.01□□□□□ -0.49
VPS37A-202ENST00000425020 SH2B1Q9NRF2 756 aaPredicted RBP12.01□□□□□ -0.49
VPS37A-202ENST00000425020 ERICH4A6NGS2 130 aa12.01□□□□□ -0.49
VPS37A-202ENST00000425020 UNC5CLQ8IV45 518 aa12.01□□□□□ -0.49
VPS37A-202ENST00000425020 C8orf76Q96K31 380 aa12.01□□□□□ -0.49
VPS37A-202ENST00000425020 INSRP06213 1382 aa12.01□□□□□ -0.49
VPS37A-202ENST00000425020 ERVK-7P63135 1459 aa12.01□□□□□ -0.49
VPS37A-202ENST00000425020 ZNF518AQ6AHZ1 1483 aa12.01□□□□□ -0.49
VPS37A-202ENST00000425020 ABCC1P33527 1531 aa12.01□□□□□ -0.49
VPS37A-202ENST00000425020 HYPKQ9NX55 129 aa12.01□□□□□ -0.49
VPS37A-202ENST00000425020 LRP2BPQ9P2M1 347 aa12.01□□□□□ -0.49
VPS37A-202ENST00000425020 GOLGA8BA8MQT2 603 aa12□□□□□ -0.49
VPS37A-202ENST00000425020 NAP1L1P55209 391 aaKnown RBP12□□□□□ -0.49
VPS37A-202ENST00000425020 TIMM10P62072 90 aa12□□□□□ -0.49
VPS37A-202ENST00000425020 ERCC4Q92889 916 aaPredicted RBP12□□□□□ -0.49
VPS37A-202ENST00000425020 HOOK1Q9UJC3 728 aaKnown RBP12□□□□□ -0.49
VPS37A-202ENST00000425020 EIF2AK4Q9P2K8 1649 aaKnown RBP12□□□□□ -0.49
VPS37A-202ENST00000425020 F13A1P00488 732 aa12□□□□□ -0.49
VPS37A-202ENST00000425020 TNNT1P13805 278 aa12□□□□□ -0.49
VPS37A-202ENST00000425020 RXRAP19793 462 aa12□□□□□ -0.49
VPS37A-202ENST00000425020 SART3Q15020 963 aaKnown RBP12□□□□□ -0.49
VPS37A-202ENST00000425020 IMMTQ16891 758 aaKnown RBP12□□□□□ -0.49
VPS37A-202ENST00000425020 ANO6Q4KMQ2 910 aa12□□□□□ -0.49
VPS37A-202ENST00000425020 LUZP1Q86V48 1076 aa12□□□□□ -0.49
VPS37A-202ENST00000425020 CPLX3Q8WVH0 158 aa12□□□□□ -0.49
VPS37A-202ENST00000425020 MAP7D2Q96T17 732 aa12□□□□□ -0.49
VPS37A-202ENST00000425020 U3KPZ7 1027 aaPredicted RBP12□□□□□ -0.49
VPS37A-202ENST00000425020 PBRM1Q86U86 1689 aa12□□□□□ -0.49
VPS37A-202ENST00000425020 ATP10AO60312 1499 aa12□□□□□ -0.49
VPS37A-202ENST00000425020 IPO7O95373 1038 aaKnown RBP12□□□□□ -0.49
VPS37A-202ENST00000425020 AIDAQ96BJ3 306 aa12□□□□□ -0.49
VPS37A-202ENST00000425020 ANTXR1Q9H6X2 564 aa12□□□□□ -0.49
VPS37A-202ENST00000425020 SOS1Q07889 1333 aaPredicted RBP11.99□□□□□ -0.49
VPS37A-202ENST00000425020 CCDC69A6NI79 296 aa11.99□□□□□ -0.49
VPS37A-202ENST00000425020 AMOTQ4VCS5 1084 aa11.99□□□□□ -0.49
VPS37A-202ENST00000425020 DDX17Q92841 729 aaKnown RBP11.99□□□□□ -0.49
VPS37A-202ENST00000425020 ZMYND15Q9H091 742 aa11.99□□□□□ -0.49
VPS37A-202ENST00000425020 LMBRD1Q9NUN5 540 aa11.99□□□□□ -0.49
VPS37A-202ENST00000425020 RAI14Q9P0K7 980 aa11.99□□□□□ -0.49
VPS37A-202ENST00000425020 Q6ZUG5 572 aa11.99□□□□□ -0.49
VPS37A-202ENST00000425020 TRERF1Q96PN7 1200 aa11.99□□□□□ -0.49
VPS37A-202ENST00000425020 BICC1Q9H694 974 aaKnown RBP11.99□□□□□ -0.49
VPS37A-202ENST00000425020 ZKSCAN5Q9Y2L8 839 aa11.99□□□□□ -0.49
VPS37A-202ENST00000425020 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.99□□□□□ -0.49
VPS37A-202ENST00000425020 USP16Q9Y5T5 823 aa11.99□□□□□ -0.49
VPS37A-202ENST00000425020 TARBP1Q13395 1621 aaKnown RBP11.99□□□□□ -0.49
VPS37A-202ENST00000425020 HOXC9P31274 260 aa11.98□□□□□ -0.49
VPS37A-202ENST00000425020 DHX8Q14562 1220 aaKnown RBP11.98□□□□□ -0.49
VPS37A-202ENST00000425020 HELBQ8NG08 1087 aaPredicted RBP11.98□□□□□ -0.49
VPS37A-202ENST00000425020 MARCKSP29966 332 aaPredicted RBP11.98□□□□□ -0.49
VPS37A-202ENST00000425020 ATP2B2Q01814 1243 aa11.98□□□□□ -0.49
VPS37A-202ENST00000425020 NOLC1Q14978 699 aaKnown RBP eCLIP11.98□□□□□ -0.49
VPS37A-202ENST00000425020 LDHAL6AQ6ZMR3 332 aa11.98□□□□□ -0.49
VPS37A-202ENST00000425020 CCAR1Q8IX12 1150 aaKnown RBP11.98□□□□□ -0.49
VPS37A-202ENST00000425020 ANKRD20A12PQ8NF67 263 aa11.98□□□□□ -0.49
VPS37A-202ENST00000425020 ORAI2Q96SN7 254 aa11.98□□□□□ -0.49
VPS37A-202ENST00000425020 MAST1Q9Y2H9 1570 aa11.98□□□□□ -0.49
VPS37A-202ENST00000425020 KSR2Q6VAB6 950 aa11.98□□□□□ -0.49
VPS37A-202ENST00000425020 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.98□□□□□ -0.49
VPS37A-202ENST00000425020 PTPN14Q15678 1187 aa11.97□□□□□ -0.49
VPS37A-202ENST00000425020 CREB3L3Q68CJ9 461 aa11.97□□□□□ -0.49
VPS37A-202ENST00000425020 TRIM22Q8IYM9 498 aa11.97□□□□□ -0.49
VPS37A-202ENST00000425020 ZSWIM4Q9H7M6 989 aa11.97□□□□□ -0.49
VPS37A-202ENST00000425020 ORC3Q9UBD5 711 aaPredicted RBP11.97□□□□□ -0.49
VPS37A-202ENST00000425020 APOBRQ0VD83 1088 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms