RNA–Protein interactions for RNA: ENST00000424932.2

CKS1BP6-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 6, humanhuman

BASIC

Gene CKS1BP6, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP6-201ENST00000424932 JCADQ9P266 1359 aa5.9□□□□□ -1.47
CKS1BP6-201ENST00000424932 COL5A2P05997 1499 aaPredicted RBP5.9□□□□□ -1.47
CKS1BP6-201ENST00000424932 COL14A1Q05707 1796 aaKnown RBP5.89□□□□□ -1.47
CKS1BP6-201ENST00000424932 GRM8O00222 908 aa5.89□□□□□ -1.47
CKS1BP6-201ENST00000424932 GLRX3O76003 335 aaKnown RBP5.89□□□□□ -1.47
CKS1BP6-201ENST00000424932 PLEKHG5O94827 1062 aa5.89□□□□□ -1.47
CKS1BP6-201ENST00000424932 TATP17735 454 aaPredicted RBP5.89□□□□□ -1.47
CKS1BP6-201ENST00000424932 XPCQ01831 940 aaPredicted RBP5.89□□□□□ -1.47
CKS1BP6-201ENST00000424932 PDIA6Q15084 440 aa5.89□□□□□ -1.47
CKS1BP6-201ENST00000424932 PROSER3Q2NL68 480 aa5.89□□□□□ -1.47
CKS1BP6-201ENST00000424932 ZNF790Q6PG37 636 aa5.89□□□□□ -1.47
CKS1BP6-201ENST00000424932 LRP10Q7Z4F1 713 aa5.89□□□□□ -1.47
CKS1BP6-201ENST00000424932 IFNL2Q8IZJ0 200 aa5.89□□□□□ -1.47
CKS1BP6-201ENST00000424932 CNTROBQ8N137 903 aa5.89□□□□□ -1.47
CKS1BP6-201ENST00000424932 FAM43AQ8N2R8 423 aa5.89□□□□□ -1.47
CKS1BP6-201ENST00000424932 GPATCH3Q96I76 525 aa5.89□□□□□ -1.47
CKS1BP6-201ENST00000424932 DCAF5Q96JK2 942 aa5.89□□□□□ -1.47
CKS1BP6-201ENST00000424932 SNRKQ9NRH2 765 aa5.89□□□□□ -1.47
CKS1BP6-201ENST00000424932 TRIM6-TRIM34B2RNG4 842 aa5.88□□□□□ -1.47
CKS1BP6-201ENST00000424932 XRCC6P12956 609 aaKnown RBP eCLIP5.88□□□□□ -1.47
CKS1BP6-201ENST00000424932 NEK4P51957 841 aa5.88□□□□□ -1.47
CKS1BP6-201ENST00000424932 TSHZ3Q63HK5 1081 aa5.88□□□□□ -1.47
CKS1BP6-201ENST00000424932 LARP1Q6PKG0 1096 aaKnown RBP5.88□□□□□ -1.47
CKS1BP6-201ENST00000424932 UNC5CLQ8IV45 518 aa5.88□□□□□ -1.47
CKS1BP6-201ENST00000424932 CLASRPQ8N2M8 674 aaKnown RBP5.88□□□□□ -1.47
CKS1BP6-201ENST00000424932 KCNB2Q92953 911 aa5.88□□□□□ -1.47
CKS1BP6-201ENST00000424932 TMX3Q96JJ7 454 aa5.88□□□□□ -1.47
CKS1BP6-201ENST00000424932 IL1RAPL2Q9NP60 686 aa5.88□□□□□ -1.47
CKS1BP6-201ENST00000424932 ANO2Q9NQ90 1003 aa5.88□□□□□ -1.47
CKS1BP6-201ENST00000424932 ECHDC1Q9NTX5 307 aa5.88□□□□□ -1.47
CKS1BP6-201ENST00000424932 C9orf78Q9NZ63 289 aaPredicted RBP5.88□□□□□ -1.47
CKS1BP6-201ENST00000424932 PALD1Q9ULE6 856 aa5.88□□□□□ -1.47
CKS1BP6-201ENST00000424932 ARAP2Q8WZ64 1704 aa5.88□□□□□ -1.47
CKS1BP6-201ENST00000424932 ZBTB7CA1YPR0 619 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 NEURL1BA8MQ27 555 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 HIP1O00291 1037 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 BRD1O95696 1058 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 ANXA1P04083 346 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 IGKV5-2P06315 115 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 ZNF445P59923 1031 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 NEXNQ0ZGT2 675 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 RABL6Q3YEC7 729 aaPredicted RBP5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 TICAM2Q86XR7 235 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 NUTM1Q86Y26 1132 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 RUFY2Q8WXA3 655 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 RILPL2Q969X0 211 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 EVI5LQ96CN4 794 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 KAZALD1Q96I82 304 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 TTC14Q96N46 770 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 METTL22Q9BUU2 404 aaPredicted RBP5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 LSG1Q9H089 658 aaKnown RBP5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 GRPEL1Q9HAV7 217 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 ZDHHC9Q9Y397 364 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 SOS2Q07890 1332 aaPredicted RBP5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 WDR17Q8IZU2 1322 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 MED23Q9ULK4 1368 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 RREB1Q92766 1687 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 PHLPP1O60346 1717 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 LAMB2P55268 1798 aa5.87□□□□□ -1.47
CKS1BP6-201ENST00000424932 RPAP1Q9BWH6 1393 aaPredicted RBP5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 PCDH11XQ9BZA7 1347 aa5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 PCDH11YQ9BZA8 1340 aa5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 PRAMEF22A3QJZ6 481 aa5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 CYP27B1O15528 508 aa5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 SNRPA1P09661 255 aaKnown RBP5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 ZC3H6P61129 1189 aaKnown RBP5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 GCKRQ14397 625 aa5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 CWF19L2Q2TBE0 894 aaKnown RBP5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 LMOD2Q6P5Q4 547 aa5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 KLHL34Q8N239 644 aa5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 ZGPATQ8N5A5 531 aaKnown RBP5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 SUCLG2Q96I99 432 aa5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 ZNF496Q96IT1 587 aaPredicted RBP5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 FMNL2Q96PY5 1086 aa5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 TM6SF1Q9BZW5 370 aa5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 IL25Q9H293 177 aa5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 BICC1Q9H694 974 aaKnown RBP5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 COPRSQ9NQ92 184 aa5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 FOXD4L1Q9NU39 408 aa5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 LMBRD1Q9NUN5 540 aa5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 NLRP2Q9NX02 1062 aa5.86□□□□□ -1.47
CKS1BP6-201ENST00000424932 NUP98P52948 1817 aa5.85□□□□□ -1.47
CKS1BP6-201ENST00000424932 NRAPQ86VF7 1730 aa5.85□□□□□ -1.47
CKS1BP6-201ENST00000424932 LRP5O75197 1615 aa5.85□□□□□ -1.47
CKS1BP6-201ENST00000424932 COL16A1Q07092 1604 aaPredicted RBP5.85□□□□□ -1.47
CKS1BP6-201ENST00000424932 AHDC1Q5TGY3 1603 aaPredicted RBP5.85□□□□□ -1.47
CKS1BP6-201ENST00000424932 CCDC171Q6TFL3 1326 aa5.85□□□□□ -1.47
CKS1BP6-201ENST00000424932 WDR33Q9C0J8 1336 aaKnown RBP5.85□□□□□ -1.47
CKS1BP6-201ENST00000424932 SASH1O94885 1247 aa5.85□□□□□ -1.47
CKS1BP6-201ENST00000424932 MBD3O95983 291 aa5.85□□□□□ -1.47
CKS1BP6-201ENST00000424932 IFIT2P09913 472 aaKnown RBP5.85□□□□□ -1.47
CKS1BP6-201ENST00000424932 PDIA4P13667 645 aaKnown RBP5.85□□□□□ -1.47
CKS1BP6-201ENST00000424932 OS9Q13438 667 aaPredicted RBP5.85□□□□□ -1.47
CKS1BP6-201ENST00000424932 PKP1Q13835 747 aa5.85□□□□□ -1.47
CKS1BP6-201ENST00000424932 NKX1-1Q15270 411 aaPredicted RBP5.85□□□□□ -1.47
CKS1BP6-201ENST00000424932 KIAA1211Q6ZU35 1233 aa5.85□□□□□ -1.47
CKS1BP6-201ENST00000424932 RIC3Q7Z5B4 369 aa5.85□□□□□ -1.47
CKS1BP6-201ENST00000424932 TTC5Q8N0Z6 440 aa5.85□□□□□ -1.47
CKS1BP6-201ENST00000424932 TMEM87AQ8NBN3 555 aa5.85□□□□□ -1.47
CKS1BP6-201ENST00000424932 GZF1Q9H116 711 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms