RNA–Protein interactions for RNA: ENST00000424833.5

SCN2A-204, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 1,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-204ENST00000424833 PCDH11YQ9BZA8 1340 aa10.18□□□□□ -0.78
SCN2A-204ENST00000424833 NUP188Q5SRE5 1749 aa10.17□□□□□ -0.78
SCN2A-204ENST00000424833 ERC2O15083 957 aa10.17□□□□□ -0.78
SCN2A-204ENST00000424833 ZBTB22O15209 634 aa10.17□□□□□ -0.78
SCN2A-204ENST00000424833 HSP90AB1P08238 724 aaKnown RBP10.17□□□□□ -0.78
SCN2A-204ENST00000424833 SNRPA1P09661 255 aaKnown RBP10.17□□□□□ -0.78
SCN2A-204ENST00000424833 CHMLP26374 656 aa10.17□□□□□ -0.78
SCN2A-204ENST00000424833 HOXD11P31277 338 aaPredicted RBP10.17□□□□□ -0.78
SCN2A-204ENST00000424833 LARP1Q6PKG0 1096 aaKnown RBP10.17□□□□□ -0.78
SCN2A-204ENST00000424833 TOM1L2Q6ZVM7 507 aa10.17□□□□□ -0.78
SCN2A-204ENST00000424833 COPS6Q7L5N1 327 aa10.17□□□□□ -0.78
SCN2A-204ENST00000424833 C9orf78Q9NZ63 289 aaPredicted RBP10.17□□□□□ -0.78
SCN2A-204ENST00000424833 CHMP5Q9NZZ3 219 aa10.17□□□□□ -0.78
SCN2A-204ENST00000424833 PA2G4Q9UQ80 394 aaKnown RBP10.17□□□□□ -0.78
SCN2A-204ENST00000424833 USP42Q9H9J4 1324 aaKnown RBP10.17□□□□□ -0.78
SCN2A-204ENST00000424833 TNS2Q63HR2 1409 aa10.17□□□□□ -0.78
SCN2A-204ENST00000424833 AK9Q5TCS8 1911 aa10.17□□□□□ -0.78
SCN2A-204ENST00000424833 NEURL1BA8MQ27 555 aa10.17□□□□□ -0.78
SCN2A-204ENST00000424833 K7ELQ4 463 aaPredicted RBP10.17□□□□□ -0.78
SCN2A-204ENST00000424833 BRD2P25440 801 aaKnown RBP10.17□□□□□ -0.78
SCN2A-204ENST00000424833 CABP4P57796 275 aa10.17□□□□□ -0.78
SCN2A-204ENST00000424833 NKX1-1Q15270 411 aaPredicted RBP10.17□□□□□ -0.78
SCN2A-204ENST00000424833 CASC1Q6TDU7 716 aa10.17□□□□□ -0.78
SCN2A-204ENST00000424833 ZCRB1Q8TBF4 217 aaKnown RBP10.17□□□□□ -0.78
SCN2A-204ENST00000424833 KIF1BPQ96EK5 621 aa10.17□□□□□ -0.78
SCN2A-204ENST00000424833 FMNL2Q96PY5 1086 aa10.17□□□□□ -0.78
SCN2A-204ENST00000424833 ESYT1Q9BSJ8 1104 aa10.17□□□□□ -0.78
SCN2A-204ENST00000424833 CARD10Q9BWT7 1032 aa10.17□□□□□ -0.78
SCN2A-204ENST00000424833 BICC1Q9H694 974 aaKnown RBP10.17□□□□□ -0.78
SCN2A-204ENST00000424833 AFDNP55196 1824 aaKnown RBP10.16□□□□□ -0.78
SCN2A-204ENST00000424833 NBPF26B4DH59 902 aa10.16□□□□□ -0.78
SCN2A-204ENST00000424833 DDX58O95786 925 aaKnown RBP10.16□□□□□ -0.78
SCN2A-204ENST00000424833 RABEP1Q15276 862 aa10.16□□□□□ -0.78
SCN2A-204ENST00000424833 NBPF14Q5TI25 921 aa10.16□□□□□ -0.78
SCN2A-204ENST00000424833 NBPF10Q6P3W6 841 aaKnown RBP10.16□□□□□ -0.78
SCN2A-204ENST00000424833 TTC5Q8N0Z6 440 aa10.16□□□□□ -0.78
SCN2A-204ENST00000424833 NBPF15Q8N660 670 aa10.16□□□□□ -0.78
SCN2A-204ENST00000424833 METTL22Q9BUU2 404 aaPredicted RBP10.16□□□□□ -0.78
SCN2A-204ENST00000424833 TJP1Q07157 1748 aa10.16□□□□□ -0.78
SCN2A-204ENST00000424833 COL16A1Q07092 1604 aaPredicted RBP10.15□□□□□ -0.78
SCN2A-204ENST00000424833 REC8O95072 547 aa10.15□□□□□ -0.78
SCN2A-204ENST00000424833 IL2RBP14784 551 aa10.15□□□□□ -0.78
SCN2A-204ENST00000424833 GCKRQ14397 625 aa10.15□□□□□ -0.78
SCN2A-204ENST00000424833 EPHA10Q5JZY3 1008 aa10.15□□□□□ -0.78
SCN2A-204ENST00000424833 RIC3Q7Z5B4 369 aa10.15□□□□□ -0.78
SCN2A-204ENST00000424833 MYD88Q99836 296 aa10.15□□□□□ -0.78
SCN2A-204ENST00000424833 MAP4K4O95819 1239 aaPredicted RBP10.14□□□□□ -0.79
SCN2A-204ENST00000424833 GSE1Q14687 1217 aa10.14□□□□□ -0.79
SCN2A-204ENST00000424833 TAF7LQ5H9L4 462 aa10.14□□□□□ -0.79
SCN2A-204ENST00000424833 DHX37Q8IY37 1157 aaKnown RBP10.14□□□□□ -0.79
SCN2A-204ENST00000424833 RILPL2Q969X0 211 aa10.14□□□□□ -0.79
SCN2A-204ENST00000424833 STRN4Q9NRL3 753 aa10.14□□□□□ -0.79
SCN2A-204ENST00000424833 PALD1Q9ULE6 856 aa10.14□□□□□ -0.79
SCN2A-204ENST00000424833 ROBO1Q9Y6N7 1651 aa10.14□□□□□ -0.79
SCN2A-204ENST00000424833 TRIM6-TRIM34B2RNG4 842 aa10.14□□□□□ -0.79
SCN2A-204ENST00000424833 ERVV-2B6SEH9 535 aa10.14□□□□□ -0.79
SCN2A-204ENST00000424833 SASH1O94885 1247 aa10.14□□□□□ -0.79
SCN2A-204ENST00000424833 ANKRD13DQ6ZTN6 518 aa10.14□□□□□ -0.79
SCN2A-204ENST00000424833 COL22A1Q8NFW1 1626 aaPredicted RBP10.14□□□□□ -0.79
SCN2A-204ENST00000424833 DISP2A7MBM2 1401 aa10.13□□□□□ -0.79
SCN2A-204ENST00000424833 CASP7P55210 303 aa10.13□□□□□ -0.79
SCN2A-204ENST00000424833 HSP90AB4PQ58FF6 505 aa10.13□□□□□ -0.79
SCN2A-204ENST00000424833 IL17RAQ96F46 866 aa10.13□□□□□ -0.79
SCN2A-204ENST00000424833 FOXD4L1Q9NU39 408 aa10.13□□□□□ -0.79
SCN2A-204ENST00000424833 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.13□□□□□ -0.79
SCN2A-204ENST00000424833 COL15A1P39059 1388 aa10.13□□□□□ -0.79
SCN2A-204ENST00000424833 PLCH1Q4KWH8 1693 aa10.13□□□□□ -0.79
SCN2A-204ENST00000424833 AHDC1Q5TGY3 1603 aaPredicted RBP10.12□□□□□ -0.79
SCN2A-204ENST00000424833 MCM4P33991 863 aa10.12□□□□□ -0.79
SCN2A-204ENST00000424833 RAB3GAP1Q15042 981 aa10.12□□□□□ -0.79
SCN2A-204ENST00000424833 JARID2Q92833 1246 aaPredicted RBP10.12□□□□□ -0.79
SCN2A-204ENST00000424833 CIZ1Q9ULV3 898 aaPredicted RBP10.12□□□□□ -0.79
SCN2A-204ENST00000424833 COL14A1Q05707 1796 aaKnown RBP10.12□□□□□ -0.79
SCN2A-204ENST00000424833 TTC41PQ6P2S7 1318 aa10.12□□□□□ -0.79
SCN2A-204ENST00000424833 RFX5P48382 616 aaPredicted RBP10.12□□□□□ -0.79
SCN2A-204ENST00000424833 KLHDC4Q8TBB5 520 aa10.12□□□□□ -0.79
SCN2A-204ENST00000424833 DDX54Q8TDD1 881 aaKnown RBP10.12□□□□□ -0.79
SCN2A-204ENST00000424833 TLR7Q9NYK1 1049 aaKnown RBP10.12□□□□□ -0.79
SCN2A-204ENST00000424833 ERBB4Q15303 1308 aa10.11□□□□□ -0.79
SCN2A-204ENST00000424833 ATP5J2-PTCD1G3V325 749 aa10.11□□□□□ -0.79
SCN2A-204ENST00000424833 PTCD1O75127 700 aaKnown RBP10.11□□□□□ -0.79
SCN2A-204ENST00000424833 NEXNQ0ZGT2 675 aa10.11□□□□□ -0.79
SCN2A-204ENST00000424833 OS9Q13438 667 aaPredicted RBP10.11□□□□□ -0.79
SCN2A-204ENST00000424833 RABL6Q3YEC7 729 aaPredicted RBP10.11□□□□□ -0.79
SCN2A-204ENST00000424833 TTLL7Q6ZT98 887 aa10.11□□□□□ -0.79
SCN2A-204ENST00000424833 PLBD2Q8NHP8 589 aa10.11□□□□□ -0.79
SCN2A-204ENST00000424833 TNPO1Q92973 898 aaKnown RBP10.11□□□□□ -0.79
SCN2A-204ENST00000424833 EAF2Q96CJ1 260 aaPredicted RBP10.11□□□□□ -0.79
SCN2A-204ENST00000424833 PKNOX2Q96KN3 472 aa10.11□□□□□ -0.79
SCN2A-204ENST00000424833 ITGB4P16144 1822 aa10.11□□□□□ -0.79
SCN2A-204ENST00000424833 WNK3Q9BYP7 1800 aa10.11□□□□□ -0.79
SCN2A-204ENST00000424833 SGSM2O43147 1006 aa10.1□□□□□ -0.79
SCN2A-204ENST00000424833 A1BGP04217 495 aa10.1□□□□□ -0.79
SCN2A-204ENST00000424833 UBE3BQ7Z3V4 1068 aa10.1□□□□□ -0.79
SCN2A-204ENST00000424833 ERC1Q8IUD2 1116 aa10.1□□□□□ -0.79
SCN2A-204ENST00000424833 CLASRPQ8N2M8 674 aaKnown RBP10.1□□□□□ -0.79
SCN2A-204ENST00000424833 ANO2Q9NQ90 1003 aa10.1□□□□□ -0.79
SCN2A-204ENST00000424833 ECHDC1Q9NTX5 307 aa10.1□□□□□ -0.79
SCN2A-204ENST00000424833 RNF216Q9NWF9 866 aaPredicted RBP10.1□□□□□ -0.79
SCN2A-204ENST00000424833 BTG4Q9NY30 223 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms