RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 KCNC4Q03721 635 aa7.53□□□□□ -1.2
VPS8-205ENST00000424721 SCUBE3Q8IX30 993 aa7.53□□□□□ -1.2
VPS8-205ENST00000424721 PLA2G2EQ9NZK7 142 aa7.53□□□□□ -1.2
VPS8-205ENST00000424721 AATKQ6ZMQ8 1374 aa7.53□□□□□ -1.2
VPS8-205ENST00000424721 PLCH1Q4KWH8 1693 aa7.52□□□□□ -1.21
VPS8-205ENST00000424721 ZPR1O75312 459 aa7.52□□□□□ -1.21
VPS8-205ENST00000424721 FDX1P10109 184 aa7.52□□□□□ -1.21
VPS8-205ENST00000424721 HDGFL2Q7Z4V5 671 aaPredicted RBP7.52□□□□□ -1.21
VPS8-205ENST00000424721 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.52□□□□□ -1.21
VPS8-205ENST00000424721 CARD10Q9BWT7 1032 aa7.52□□□□□ -1.21
VPS8-205ENST00000424721 LIMD1Q9UGP4 676 aa7.52□□□□□ -1.21
VPS8-205ENST00000424721 BRWD3Q6RI45 1802 aa7.52□□□□□ -1.21
VPS8-205ENST00000424721 CRB1P82279 1406 aa7.52□□□□□ -1.21
VPS8-205ENST00000424721 ALS2Q96Q42 1657 aa7.51□□□□□ -1.21
VPS8-205ENST00000424721 TLL1O43897 1013 aa7.51□□□□□ -1.21
VPS8-205ENST00000424721 PRPF38BQ5VTL8 546 aaKnown RBP7.51□□□□□ -1.21
VPS8-205ENST00000424721 ARHGEF25Q86VW2 580 aa7.51□□□□□ -1.21
VPS8-205ENST00000424721 PUS7Q96PZ0 661 aaKnown RBP7.51□□□□□ -1.21
VPS8-205ENST00000424721 TERF2IPQ9NYB0 399 aa7.51□□□□□ -1.21
VPS8-205ENST00000424721 ITSN1Q15811 1721 aa7.51□□□□□ -1.21
VPS8-205ENST00000424721 TRPM3Q9HCF6 1732 aaPredicted RBP7.51□□□□□ -1.21
VPS8-205ENST00000424721 TTC21BQ7Z4L5 1316 aa7.51□□□□□ -1.21
VPS8-205ENST00000424721 WDR17Q8IZU2 1322 aa7.51□□□□□ -1.21
VPS8-205ENST00000424721 EP400Q96L91 3159 aa7.51□□□□□ -1.21
VPS8-205ENST00000424721 ROCK2O75116 1388 aaKnown RBP7.5□□□□□ -1.21
VPS8-205ENST00000424721 NKX2-3Q8TAU0 364 aa7.5□□□□□ -1.21
VPS8-205ENST00000424721 TMC1Q8TDI8 760 aa7.5□□□□□ -1.21
VPS8-205ENST00000424721 ZBTB3Q9H5J0 574 aa7.5□□□□□ -1.21
VPS8-205ENST00000424721 STK32BQ9NY57 414 aa7.5□□□□□ -1.21
VPS8-205ENST00000424721 PCDHGC3Q9UN70 934 aa7.5□□□□□ -1.21
VPS8-205ENST00000424721 RGPD1P0DJD0 1748 aa7.49□□□□□ -1.21
VPS8-205ENST00000424721 KTN1Q86UP2 1357 aaKnown RBP7.49□□□□□ -1.21
VPS8-205ENST00000424721 YY1P25490 414 aa7.49□□□□□ -1.21
VPS8-205ENST00000424721 CSPP1Q1MSJ5 1256 aa7.49□□□□□ -1.21
VPS8-205ENST00000424721 Q3C1V9 767 aa7.49□□□□□ -1.21
VPS8-205ENST00000424721 RNF19BQ6ZMZ0 732 aa7.49□□□□□ -1.21
VPS8-205ENST00000424721 PROCA1Q8NCQ7 364 aaPredicted RBP7.49□□□□□ -1.21
VPS8-205ENST00000424721 SIN3AQ96ST3 1273 aa7.49□□□□□ -1.21
VPS8-205ENST00000424721 CARD11Q9BXL7 1154 aa7.49□□□□□ -1.21
VPS8-205ENST00000424721 OVOS2A0A0G2JMS6 1433 aa7.49□□□□□ -1.21
VPS8-205ENST00000424721 OVOS2A0A0J9YW53 1432 aa7.49□□□□□ -1.21
VPS8-205ENST00000424721 USP6P35125 1406 aa7.49□□□□□ -1.21
VPS8-205ENST00000424721 OVOS2Q6IE36 1432 aa7.49□□□□□ -1.21
VPS8-205ENST00000424721 KIAA1210Q9ULL0 1709 aa7.49□□□□□ -1.21
VPS8-205ENST00000424721 CCDC7Q96M83 1385 aa7.48□□□□□ -1.21
VPS8-205ENST00000424721 CAMTA1Q9Y6Y1 1673 aa7.48□□□□□ -1.21
VPS8-205ENST00000424721 SPDYE5A6NIY4 337 aa7.48□□□□□ -1.21
VPS8-205ENST00000424721 FMNL1O95466 1100 aaPredicted RBP7.48□□□□□ -1.21
VPS8-205ENST00000424721 FLIIQ13045 1269 aa7.48□□□□□ -1.21
VPS8-205ENST00000424721 PPP2R2DQ66LE6 453 aa7.48□□□□□ -1.21
VPS8-205ENST00000424721 SYMPKQ92797 1274 aaKnown RBP7.48□□□□□ -1.21
VPS8-205ENST00000424721 THAP11Q96EK4 314 aa7.48□□□□□ -1.21
VPS8-205ENST00000424721 NLRP2Q9NX02 1062 aa7.48□□□□□ -1.21
VPS8-205ENST00000424721 PCDHB15Q9Y5E8 787 aa7.48□□□□□ -1.21
VPS8-205ENST00000424721 SRCAPQ6ZRS2 3230 aa7.48□□□□□ -1.21
VPS8-205ENST00000424721 NRAPQ86VF7 1730 aa7.47□□□□□ -1.21
VPS8-205ENST00000424721 ABCA3Q99758 1704 aa7.47□□□□□ -1.21
VPS8-205ENST00000424721 C6orf229H3BNL8 230 aa7.47□□□□□ -1.21
VPS8-205ENST00000424721 IL2RBP14784 551 aa7.47□□□□□ -1.21
VPS8-205ENST00000424721 MTMR2Q13614 643 aa7.47□□□□□ -1.21
VPS8-205ENST00000424721 BRICD5Q6PL45 260 aa7.47□□□□□ -1.21
VPS8-205ENST00000424721 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.47□□□□□ -1.21
VPS8-205ENST00000424721 MARCH10Q8NA82 808 aaPredicted RBP7.47□□□□□ -1.21
VPS8-205ENST00000424721 SPSB2Q99619 263 aa7.47□□□□□ -1.21
VPS8-205ENST00000424721 LRP5O75197 1615 aa7.47□□□□□ -1.21
VPS8-205ENST00000424721 COL5A2P05997 1499 aaPredicted RBP7.47□□□□□ -1.21
VPS8-205ENST00000424721 THSD7AQ9UPZ6 1657 aa7.47□□□□□ -1.21
VPS8-205ENST00000424721 LILRB3O75022 631 aa7.46□□□□□ -1.22
VPS8-205ENST00000424721 ADH1BP00325 375 aa7.46□□□□□ -1.22
VPS8-205ENST00000424721 RFC5P40937 340 aa7.46□□□□□ -1.22
VPS8-205ENST00000424721 SLC15A2Q16348 729 aa7.46□□□□□ -1.22
VPS8-205ENST00000424721 TXNRD1Q16881 649 aa7.46□□□□□ -1.22
VPS8-205ENST00000424721 SALL2Q9Y467 1007 aaPredicted RBP7.46□□□□□ -1.22
VPS8-205ENST00000424721 ARHGEF28Q8N1W1 1705 aaKnown RBP7.46□□□□□ -1.22
VPS8-205ENST00000424721 NINLQ9Y2I6 1382 aa7.46□□□□□ -1.22
VPS8-205ENST00000424721 BCL9O00512 1426 aa7.45□□□□□ -1.22
VPS8-205ENST00000424721 QPCTQ16769 361 aa7.45□□□□□ -1.22
VPS8-205ENST00000424721 TMEM259Q4ZIN3 620 aa7.45□□□□□ -1.22
VPS8-205ENST00000424721 CDCA8Q53HL2 280 aa7.45□□□□□ -1.22
VPS8-205ENST00000424721 IFFO2Q5TF58 517 aa7.45□□□□□ -1.22
VPS8-205ENST00000424721 HELBQ8NG08 1087 aaPredicted RBP7.45□□□□□ -1.22
VPS8-205ENST00000424721 COG3Q96JB2 828 aa7.45□□□□□ -1.22
VPS8-205ENST00000424721 AMPHP49418 695 aa7.44□□□□□ -1.22
VPS8-205ENST00000424721 SLC27A3Q5K4L6 730 aa7.44□□□□□ -1.22
VPS8-205ENST00000424721 RETREG3Q86VR2 466 aa7.44□□□□□ -1.22
VPS8-205ENST00000424721 FAM160A2Q8N612 972 aaPredicted RBP7.44□□□□□ -1.22
VPS8-205ENST00000424721 ANKRD24Q8TF21 1146 aa7.44□□□□□ -1.22
VPS8-205ENST00000424721 SLC16A10Q8TF71 515 aa7.44□□□□□ -1.22
VPS8-205ENST00000424721 IP6K1Q92551 441 aa7.44□□□□□ -1.22
VPS8-205ENST00000424721 USB1Q9BQ65 265 aaKnown RBP7.44□□□□□ -1.22
VPS8-205ENST00000424721 MTFR1LQ9H019 292 aa7.44□□□□□ -1.22
VPS8-205ENST00000424721 SLC12A5Q9H2X9 1139 aa7.44□□□□□ -1.22
VPS8-205ENST00000424721 USP31Q70CQ4 1352 aa7.44□□□□□ -1.22
VPS8-205ENST00000424721 CPSF1Q10570 1443 aaKnown RBP7.44□□□□□ -1.22
VPS8-205ENST00000424721 PHRF1Q9P1Y6 1649 aaKnown RBP7.43□□□□□ -1.22
VPS8-205ENST00000424721 APBB1O00213 710 aa7.43□□□□□ -1.22
VPS8-205ENST00000424721 ZBTB7AO95365 584 aa7.43□□□□□ -1.22
VPS8-205ENST00000424721 S1PR4O95977 384 aa7.43□□□□□ -1.22
VPS8-205ENST00000424721 POLD1P28340 1107 aa7.43□□□□□ -1.22
VPS8-205ENST00000424721 BANK1Q8NDB2 785 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms