RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 MST1RQ04912 1400 aa10.33□□□□□ -0.76
VPS8-204ENST00000424463 USP54Q70EL1 1684 aa10.33□□□□□ -0.76
VPS8-204ENST00000424463 KIAA0232Q92628 1395 aa10.33□□□□□ -0.76
VPS8-204ENST00000424463 HTATSF1O43719 755 aaKnown RBP10.33□□□□□ -0.76
VPS8-204ENST00000424463 ZNF280DQ6N043 979 aa10.33□□□□□ -0.76
VPS8-204ENST00000424463 FAM210AQ96ND0 272 aa10.33□□□□□ -0.76
VPS8-204ENST00000424463 TSPYL1Q9H0U9 437 aa10.33□□□□□ -0.76
VPS8-204ENST00000424463 SUGT1Q9Y2Z0 365 aa10.33□□□□□ -0.76
VPS8-204ENST00000424463 PPME1Q9Y570 386 aa10.33□□□□□ -0.76
VPS8-204ENST00000424463 ABCC4O15439 1325 aa10.33□□□□□ -0.76
VPS8-204ENST00000424463 USP19O94966 1318 aa10.33□□□□□ -0.76
VPS8-204ENST00000424463 CCDC189A1A4V9 331 aa10.32□□□□□ -0.76
VPS8-204ENST00000424463 SMARCA5O60264 1052 aaPredicted RBP10.32□□□□□ -0.76
VPS8-204ENST00000424463 KRBA2Q6ZNG9 492 aa10.32□□□□□ -0.76
VPS8-204ENST00000424463 DONSONQ9NYP3 566 aa10.32□□□□□ -0.76
VPS8-204ENST00000424463 MAP3K5Q99683 1374 aa10.32□□□□□ -0.76
VPS8-204ENST00000424463 CCT2P78371 535 aaKnown RBP10.32□□□□□ -0.76
VPS8-204ENST00000424463 G2E3Q7L622 706 aa10.32□□□□□ -0.76
VPS8-204ENST00000424463 API5Q9BZZ5 524 aaKnown RBP10.32□□□□□ -0.76
VPS8-204ENST00000424463 FAM13BQ9NYF5 915 aa10.32□□□□□ -0.76
VPS8-204ENST00000424463 SMC3Q9UQE7 1217 aa10.32□□□□□ -0.76
VPS8-204ENST00000424463 LTN1O94822 1766 aa10.32□□□□□ -0.76
VPS8-204ENST00000424463 TAF7Q15545 349 aaPredicted RBP10.31□□□□□ -0.76
VPS8-204ENST00000424463 CADPS2Q86UW7 1296 aa10.31□□□□□ -0.76
VPS8-204ENST00000424463 KLHL33A6NCF5 533 aa10.31□□□□□ -0.76
VPS8-204ENST00000424463 MARCH6O60337 910 aa10.31□□□□□ -0.76
VPS8-204ENST00000424463 PIK3R5Q8WYR1 880 aa10.31□□□□□ -0.76
VPS8-204ENST00000424463 KDM4CQ9H3R0 1056 aa10.31□□□□□ -0.76
VPS8-204ENST00000424463 RBM27Q9P2N5 1060 aaKnown RBP10.31□□□□□ -0.76
VPS8-204ENST00000424463 MPRIPQ6WCQ1 1025 aa10.3□□□□□ -0.76
VPS8-204ENST00000424463 SIRT2Q8IXJ6 389 aa10.3□□□□□ -0.76
VPS8-204ENST00000424463 NBPF3Q9H094 633 aa10.3□□□□□ -0.76
VPS8-204ENST00000424463 ZNF335Q9H4Z2 1342 aaPredicted RBP10.3□□□□□ -0.76
VPS8-204ENST00000424463 MPHOSPH10O00566 681 aaKnown RBP10.3□□□□□ -0.76
VPS8-204ENST00000424463 PPFIA4O75335 1185 aa10.3□□□□□ -0.76
VPS8-204ENST00000424463 SEC24BO95487 1268 aa10.3□□□□□ -0.76
VPS8-204ENST00000424463 ZNF530Q6P9A1 599 aaPredicted RBP10.3□□□□□ -0.76
VPS8-204ENST00000424463 MAMSTRQ6ZN01 415 aa10.3□□□□□ -0.76
VPS8-204ENST00000424463 CCDC97Q96F63 343 aaPredicted RBP10.3□□□□□ -0.76
VPS8-204ENST00000424463 SLIT3O75094 1523 aa10.29□□□□□ -0.76
VPS8-204ENST00000424463 F6X3S4 739 aa10.29□□□□□ -0.76
VPS8-204ENST00000424463 ERCC3P19447 782 aa10.29□□□□□ -0.76
VPS8-204ENST00000424463 CALRP27797 417 aaKnown RBP10.29□□□□□ -0.76
VPS8-204ENST00000424463 CHRNA2Q15822 529 aa10.29□□□□□ -0.76
VPS8-204ENST00000424463 SMC5Q8IY18 1101 aa10.29□□□□□ -0.76
VPS8-204ENST00000424463 ERBB3P21860 1342 aa10.29□□□□□ -0.76
VPS8-204ENST00000424463 TRPM3Q9HCF6 1732 aaPredicted RBP10.29□□□□□ -0.76
VPS8-204ENST00000424463 EPB41L2O43491 1005 aaKnown RBP10.29□□□□□ -0.76
VPS8-204ENST00000424463 KCNQ3O43525 872 aa10.29□□□□□ -0.76
VPS8-204ENST00000424463 PLEKHO1Q53GL0 409 aaPredicted RBP10.29□□□□□ -0.76
VPS8-204ENST00000424463 INTS3Q68E01 1043 aaKnown RBP10.29□□□□□ -0.76
VPS8-204ENST00000424463 APBB1O00213 710 aa10.28□□□□□ -0.76
VPS8-204ENST00000424463 RGS12O14924 1447 aa10.28□□□□□ -0.76
VPS8-204ENST00000424463 LMTK3Q96Q04 1460 aa10.28□□□□□ -0.76
VPS8-204ENST00000424463 RGPD2P0DJD1 1756 aa10.28□□□□□ -0.76
VPS8-204ENST00000424463 KIF1CO43896 1103 aaKnown RBP10.28□□□□□ -0.76
VPS8-204ENST00000424463 ZRSR2Q15696 482 aaKnown RBP10.28□□□□□ -0.76
VPS8-204ENST00000424463 SLC4A10Q6U841 1118 aa10.28□□□□□ -0.76
VPS8-204ENST00000424463 BRINP3Q76B58 766 aa10.28□□□□□ -0.76
VPS8-204ENST00000424463 NLRP2Q9NX02 1062 aa10.28□□□□□ -0.76
VPS8-204ENST00000424463 NPHP3Q7Z494 1330 aa10.27□□□□□ -0.76
VPS8-204ENST00000424463 MED1Q15648 1581 aaPredicted RBP10.27□□□□□ -0.76
VPS8-204ENST00000424463 PAX7P23759 505 aa10.27□□□□□ -0.77
VPS8-204ENST00000424463 TDO2P48775 406 aa10.27□□□□□ -0.77
VPS8-204ENST00000424463 NUCB1Q02818 461 aa10.27□□□□□ -0.77
VPS8-204ENST00000424463 AKAP4Q5JQC9 854 aa10.27□□□□□ -0.77
VPS8-204ENST00000424463 HELBQ8NG08 1087 aaPredicted RBP10.27□□□□□ -0.77
VPS8-204ENST00000424463 LNPKQ9C0E8 428 aa10.27□□□□□ -0.77
VPS8-204ENST00000424463 STK24Q9Y6E0 443 aa10.27□□□□□ -0.77
VPS8-204ENST00000424463 NCOA3Q9Y6Q9 1424 aa10.27□□□□□ -0.77
VPS8-204ENST00000424463 DCCP43146 1447 aa10.26□□□□□ -0.77
VPS8-204ENST00000424463 CEMIPQ8WUJ3 1361 aa10.26□□□□□ -0.77
VPS8-204ENST00000424463 PTPRCP08575 1304 aa10.26□□□□□ -0.77
VPS8-204ENST00000424463 CCDC181Q5TID7 509 aa10.26□□□□□ -0.77
VPS8-204ENST00000424463 CXorf38Q8TB03 319 aa10.26□□□□□ -0.77
VPS8-204ENST00000424463 SLAIN2Q9P270 581 aa10.26□□□□□ -0.77
VPS8-204ENST00000424463 ERBB4Q15303 1308 aa10.26□□□□□ -0.77
VPS8-204ENST00000424463 SPATA31A3Q5VYP0 1347 aa10.26□□□□□ -0.77
VPS8-204ENST00000424463 C11orf91Q3C1V1 193 aa10.26□□□□□ -0.77
VPS8-204ENST00000424463 AMOTQ4VCS5 1084 aa10.26□□□□□ -0.77
VPS8-204ENST00000424463 ANKRD45Q5TZF3 282 aa10.26□□□□□ -0.77
VPS8-204ENST00000424463 CCDC30Q5VVM6 783 aa10.26□□□□□ -0.77
VPS8-204ENST00000424463 KCNV2Q8TDN2 545 aa10.26□□□□□ -0.77
VPS8-204ENST00000424463 MEIS3Q99687 375 aa10.26□□□□□ -0.77
VPS8-204ENST00000424463 PAIP2Q9BPZ3 127 aaKnown RBP10.26□□□□□ -0.77
VPS8-204ENST00000424463 STK31Q9BXU1 1019 aa10.26□□□□□ -0.77
VPS8-204ENST00000424463 KIF1AQ12756 1690 aa10.26□□□□□ -0.77
VPS8-204ENST00000424463 RNMTO43148 476 aaKnown RBP10.25□□□□□ -0.77
VPS8-204ENST00000424463 EIF2S2P20042 333 aaKnown RBP10.25□□□□□ -0.77
VPS8-204ENST00000424463 C1orf141Q5JVX7 400 aa10.25□□□□□ -0.77
VPS8-204ENST00000424463 CACTIN-AS1Q8N1I8 211 aa10.25□□□□□ -0.77
VPS8-204ENST00000424463 ANAPC4Q9UJX5 808 aa10.25□□□□□ -0.77
VPS8-204ENST00000424463 BTBD11A6QL63 1104 aa10.25□□□□□ -0.77
VPS8-204ENST00000424463 OFD1O75665 1012 aa10.25□□□□□ -0.77
VPS8-204ENST00000424463 EIF4A1P60842 406 aaKnown RBP10.25□□□□□ -0.77
VPS8-204ENST00000424463 TEFQ10587 303 aa10.25□□□□□ -0.77
VPS8-204ENST00000424463 CHD1LQ86WJ1 897 aa10.25□□□□□ -0.77
VPS8-204ENST00000424463 BABAM1Q9NWV8 329 aa10.25□□□□□ -0.77
VPS8-204ENST00000424463 PXDNQ92626 1479 aa10.25□□□□□ -0.77
VPS8-204ENST00000424463 CSB-PGBD3P0DP91 1061 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms