RNA–Protein interactions for RNA: ENST00000424408.6

LAMA4-207, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LAMA4, Length 5,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-207ENST00000424408 CCDC40Q4G0X9 1142 aa13.91□□□□□ -0.18
LAMA4-207ENST00000424408 CLGNO14967 610 aa13.91□□□□□ -0.18
LAMA4-207ENST00000424408 SLU7O95391 586 aaKnown RBP13.91□□□□□ -0.18
LAMA4-207ENST00000424408 PTPRGP23470 1445 aa13.91□□□□□ -0.18
LAMA4-207ENST00000424408 MINDY4BA8MYZ0 360 aa13.91□□□□□ -0.18
LAMA4-207ENST00000424408 UBASH3AP57075 661 aa13.91□□□□□ -0.18
LAMA4-207ENST00000424408 FAM114A1Q8IWE2 563 aa13.91□□□□□ -0.18
LAMA4-207ENST00000424408 CFAP57Q96MR6 1250 aa13.91□□□□□ -0.18
LAMA4-207ENST00000424408 CDK19Q9BWU1 502 aa13.91□□□□□ -0.18
LAMA4-207ENST00000424408 PRDM2Q13029 1718 aa13.91□□□□□ -0.18
LAMA4-207ENST00000424408 GOLGA8AA7E2F4 631 aa13.9□□□□□ -0.18
LAMA4-207ENST00000424408 TMPOP42166 694 aaKnown RBP13.9□□□□□ -0.18
LAMA4-207ENST00000424408 ZSCAN29Q8IWY8 852 aaPredicted RBP13.9□□□□□ -0.18
LAMA4-207ENST00000424408 PPP1R14CQ8TAE6 165 aa13.9□□□□□ -0.18
LAMA4-207ENST00000424408 DRC1Q96MC2 740 aa13.9□□□□□ -0.18
LAMA4-207ENST00000424408 WDR97A6NE52 1622 aa13.9□□□□□ -0.18
LAMA4-207ENST00000424408 CCDC196A0A1B0GTZ2 297 aa13.9□□□□□ -0.18
LAMA4-207ENST00000424408 SPTY2D1Q68D10 685 aaPredicted RBP13.9□□□□□ -0.18
LAMA4-207ENST00000424408 ZKSCAN5Q9Y2L8 839 aa13.9□□□□□ -0.18
LAMA4-207ENST00000424408 TRIM21P19474 475 aaKnown RBP13.9□□□□□ -0.18
LAMA4-207ENST00000424408 TMEM266Q2M3C6 531 aa13.9□□□□□ -0.18
LAMA4-207ENST00000424408 NBPF11Q86T75 865 aa13.9□□□□□ -0.18
LAMA4-207ENST00000424408 NCOA2Q15596 1464 aa13.9□□□□□ -0.18
LAMA4-207ENST00000424408 FERP16591 822 aa13.9□□□□□ -0.18
LAMA4-207ENST00000424408 OTUD6BQ8N6M0 293 aa13.9□□□□□ -0.18
LAMA4-207ENST00000424408 ANKS4BQ8N8V4 417 aa13.9□□□□□ -0.18
LAMA4-207ENST00000424408 GOLGA1Q92805 767 aa13.9□□□□□ -0.18
LAMA4-207ENST00000424408 TBC1D32Q96NH3 1257 aa13.9□□□□□ -0.18
LAMA4-207ENST00000424408 MIS18AQ9NYP9 233 aa13.9□□□□□ -0.18
LAMA4-207ENST00000424408 NFE2L2Q16236 605 aa13.9□□□□□ -0.18
LAMA4-207ENST00000424408 CABP1Q9NZU7 370 aa13.9□□□□□ -0.18
LAMA4-207ENST00000424408 POLA1P09884 1462 aaPredicted RBP13.9□□□□□ -0.19
LAMA4-207ENST00000424408 POLR3DP05423 398 aaPredicted RBP13.89□□□□□ -0.19
LAMA4-207ENST00000424408 KIAA0753Q2KHM9 967 aa13.89□□□□□ -0.19
LAMA4-207ENST00000424408 DDX23Q9BUQ8 820 aaKnown RBP13.89□□□□□ -0.19
LAMA4-207ENST00000424408 SPG7Q9UQ90 795 aa13.89□□□□□ -0.19
LAMA4-207ENST00000424408 NLRP5P59047 1200 aa13.89□□□□□ -0.19
LAMA4-207ENST00000424408 CNPY2Q9Y2B0 182 aa13.89□□□□□ -0.19
LAMA4-207ENST00000424408 OGFRQ9NZT2 677 aa13.89□□□□□ -0.19
LAMA4-207ENST00000424408 CAVIN2O95810 425 aa13.89□□□□□ -0.19
LAMA4-207ENST00000424408 TNIP1Q15025 636 aa13.89□□□□□ -0.19
LAMA4-207ENST00000424408 SELENOSQ9BQE4 189 aa13.89□□□□□ -0.19
LAMA4-207ENST00000424408 RASSF4Q9H2L5 321 aa13.89□□□□□ -0.19
LAMA4-207ENST00000424408 KIF20AO95235 890 aa13.88□□□□□ -0.19
LAMA4-207ENST00000424408 ESCO1Q5FWF5 840 aa13.88□□□□□ -0.19
LAMA4-207ENST00000424408 SSH1Q8WYL5 1049 aa13.88□□□□□ -0.19
LAMA4-207ENST00000424408 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.88□□□□□ -0.19
LAMA4-207ENST00000424408 IKBKGQ9Y6K9 419 aa13.88□□□□□ -0.19
LAMA4-207ENST00000424408 EBAG9O00559 213 aa13.88□□□□□ -0.19
LAMA4-207ENST00000424408 RRS1Q15050 365 aaKnown RBP13.88□□□□□ -0.19
LAMA4-207ENST00000424408 FCHSD2O94868 740 aa13.88□□□□□ -0.19
LAMA4-207ENST00000424408 GBP6Q6ZN66 633 aa13.88□□□□□ -0.19
LAMA4-207ENST00000424408 CCDC129Q6ZRS4 1044 aa13.88□□□□□ -0.19
LAMA4-207ENST00000424408 RAB34Q9BZG1 259 aa13.88□□□□□ -0.19
LAMA4-207ENST00000424408 TTC12Q9H892 705 aaPredicted RBP13.88□□□□□ -0.19
LAMA4-207ENST00000424408 ZNF213O14771 459 aa13.88□□□□□ -0.19
LAMA4-207ENST00000424408 N4BP3O15049 544 aa13.88□□□□□ -0.19
LAMA4-207ENST00000424408 IFIT1P09914 478 aaKnown RBP13.88□□□□□ -0.19
LAMA4-207ENST00000424408 ZSCAN22P10073 491 aaPredicted RBP13.88□□□□□ -0.19
LAMA4-207ENST00000424408 METTL24Q5JXM2 366 aa13.88□□□□□ -0.19
LAMA4-207ENST00000424408 TCERG1LQ5VWI1 586 aa13.88□□□□□ -0.19
LAMA4-207ENST00000424408 USP48Q86UV5 1035 aa13.88□□□□□ -0.19
LAMA4-207ENST00000424408 NAP1L3Q99457 506 aaPredicted RBP13.88□□□□□ -0.19
LAMA4-207ENST00000424408 NAPBQ9H115 298 aa13.88□□□□□ -0.19
LAMA4-207ENST00000424408 ABCF2Q9UG63 623 aa13.88□□□□□ -0.19
LAMA4-207ENST00000424408 CEP83Q9Y592 693 aa13.88□□□□□ -0.19
LAMA4-207ENST00000424408 ALDH1L2Q3SY69 923 aa13.87□□□□□ -0.19
LAMA4-207ENST00000424408 CCDC8Q9H0W5 538 aaPredicted RBP13.87□□□□□ -0.19
LAMA4-207ENST00000424408 IFI16Q16666 785 aaKnown RBP13.87□□□□□ -0.19
LAMA4-207ENST00000424408 SMAP1Q8IYB5 467 aaPredicted RBP13.87□□□□□ -0.19
LAMA4-207ENST00000424408 CTCFLQ8NI51 663 aaPredicted RBP13.87□□□□□ -0.19
LAMA4-207ENST00000424408 PLEKHH2Q8IVE3 1493 aa13.87□□□□□ -0.19
LAMA4-207ENST00000424408 CCDC194A0A1B0GVG4 234 aa13.87□□□□□ -0.19
LAMA4-207ENST00000424408 KRBA2Q6ZNG9 492 aa13.87□□□□□ -0.19
LAMA4-207ENST00000424408 CCDC144CPQ8IYA2 1237 aa13.87□□□□□ -0.19
LAMA4-207ENST00000424408 PRC1O43663 620 aa13.87□□□□□ -0.19
LAMA4-207ENST00000424408 DUSP27Q5VZP5 1158 aa13.87□□□□□ -0.19
LAMA4-207ENST00000424408 CCDC102BQ68D86 513 aa13.87□□□□□ -0.19
LAMA4-207ENST00000424408 CTAGE9A4FU28 777 aa13.87□□□□□ -0.19
LAMA4-207ENST00000424408 HSP90AA4PQ58FG1 418 aa13.87□□□□□ -0.19
LAMA4-207ENST00000424408 RSRC1Q96IZ7 334 aaKnown RBP13.87□□□□□ -0.19
LAMA4-207ENST00000424408 CCDC114Q96M63 670 aa13.87□□□□□ -0.19
LAMA4-207ENST00000424408 THUMPD2Q9BTF0 503 aaKnown RBP13.87□□□□□ -0.19
LAMA4-207ENST00000424408 KANK3Q6NY19 840 aa13.86□□□□□ -0.19
LAMA4-207ENST00000424408 APBB1IPQ7Z5R6 666 aaPredicted RBP13.86□□□□□ -0.19
LAMA4-207ENST00000424408 FERMT2Q96AC1 680 aa13.86□□□□□ -0.19
LAMA4-207ENST00000424408 TSNARE1Q96NA8 513 aa13.86□□□□□ -0.19
LAMA4-207ENST00000424408 STRN4Q9NRL3 753 aa13.86□□□□□ -0.19
LAMA4-207ENST00000424408 AKAP2Q9Y2D5 859 aa13.86□□□□□ -0.19
LAMA4-207ENST00000424408 PPFIA3O75145 1194 aa13.86□□□□□ -0.19
LAMA4-207ENST00000424408 AMPD3Q01432 767 aa13.86□□□□□ -0.19
LAMA4-207ENST00000424408 NAA25Q14CX7 972 aa13.86□□□□□ -0.19
LAMA4-207ENST00000424408 LRPPRCP42704 1394 aaKnown RBP13.86□□□□□ -0.19
LAMA4-207ENST00000424408 A0A1B0GUL7 405 aa13.86□□□□□ -0.19
LAMA4-207ENST00000424408 SYT1P21579 422 aa13.86□□□□□ -0.19
LAMA4-207ENST00000424408 AOPEPQ8N6M6 819 aa13.86□□□□□ -0.19
LAMA4-207ENST00000424408 CALML4Q96GE6 196 aa13.86□□□□□ -0.19
LAMA4-207ENST00000424408 RANBP6O60518 1105 aaKnown RBP13.86□□□□□ -0.19
LAMA4-207ENST00000424408 IGHMBP2P38935 993 aaKnown RBP13.86□□□□□ -0.19
LAMA4-207ENST00000424408 SEPT6Q14141 434 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms