RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 GPC2Q8N158 579 aa8.84□□□□□ -0.99
SDCBP-203ENST00000424270 BRIP1Q9BX63 1249 aa8.84□□□□□ -0.99
SDCBP-203ENST00000424270 NARFQ9UHQ1 456 aa8.84□□□□□ -0.99
SDCBP-203ENST00000424270 ZNF330Q9Y3S2 320 aaPredicted RBP8.84□□□□□ -0.99
SDCBP-203ENST00000424270 INTS5Q6P9B9 1019 aaKnown RBP8.83□□□□□ -1
SDCBP-203ENST00000424270 CTU1Q7Z7A3 348 aaKnown RBP8.83□□□□□ -1
SDCBP-203ENST00000424270 NPM2Q86SE8 214 aaKnown RBP8.83□□□□□ -1
SDCBP-203ENST00000424270 SAPCD2Q86UD0 394 aa8.83□□□□□ -1
SDCBP-203ENST00000424270 HDAC9Q9UKV0 1011 aa8.83□□□□□ -1
SDCBP-203ENST00000424270 DICER1Q9UPY3 1922 aaKnown RBP8.83□□□□□ -1
SDCBP-203ENST00000424270 COL15A1P39059 1388 aa8.83□□□□□ -1
SDCBP-203ENST00000424270 SOS1Q07889 1333 aaPredicted RBP8.82□□□□□ -1
SDCBP-203ENST00000424270 WASHC2AQ641Q2 1341 aa8.82□□□□□ -1
SDCBP-203ENST00000424270 ST20-MTHFSA0A0A6YYL1 179 aa8.82□□□□□ -1
SDCBP-203ENST00000424270 ZBTB22O15209 634 aa8.82□□□□□ -1
SDCBP-203ENST00000424270 TRPA1O75762 1119 aa8.82□□□□□ -1
SDCBP-203ENST00000424270 CANXP27824 592 aaKnown RBP8.82□□□□□ -1
SDCBP-203ENST00000424270 MTHFSP49914 203 aa8.82□□□□□ -1
SDCBP-203ENST00000424270 FKBP4Q02790 459 aaKnown RBP eCLIP8.82□□□□□ -1
SDCBP-203ENST00000424270 C1orf141Q5JVX7 400 aa8.82□□□□□ -1
SDCBP-203ENST00000424270 STYK1Q6J9G0 422 aa8.82□□□□□ -1
SDCBP-203ENST00000424270 ZNF530Q6P9A1 599 aaPredicted RBP8.82□□□□□ -1
SDCBP-203ENST00000424270 DNAJC10Q8IXB1 793 aa8.82□□□□□ -1
SDCBP-203ENST00000424270 CNBD1Q8NA66 436 aa8.82□□□□□ -1
SDCBP-203ENST00000424270 HPS5Q9UPZ3 1129 aa8.82□□□□□ -1
SDCBP-203ENST00000424270 EMILIN1Q9Y6C2 1016 aa8.82□□□□□ -1
SDCBP-203ENST00000424270 IARSP41252 1262 aaKnown RBP8.81□□□□□ -1
SDCBP-203ENST00000424270 FXR1P51114 621 aaKnown RBP eCLIP8.81□□□□□ -1
SDCBP-203ENST00000424270 POLA2Q14181 598 aa8.81□□□□□ -1
SDCBP-203ENST00000424270 PLEKHO1Q53GL0 409 aaPredicted RBP8.81□□□□□ -1
SDCBP-203ENST00000424270 USP50Q70EL3 339 aaPredicted RBP8.81□□□□□ -1
SDCBP-203ENST00000424270 NFATC2IPQ8NCF5 419 aa8.81□□□□□ -1
SDCBP-203ENST00000424270 L3MBTL2Q969R5 705 aa8.81□□□□□ -1
SDCBP-203ENST00000424270 MASTLQ96GX5 879 aa8.81□□□□□ -1
SDCBP-203ENST00000424270 CARD11Q9BXL7 1154 aa8.81□□□□□ -1
SDCBP-203ENST00000424270 AFDNP55196 1824 aaKnown RBP8.81□□□□□ -1
SDCBP-203ENST00000424270 ZNF831Q5JPB2 1677 aa8.81□□□□□ -1
SDCBP-203ENST00000424270 FER1L6Q2WGJ9 1857 aa8.81□□□□□ -1
SDCBP-203ENST00000424270 FYB1O15117 783 aa8.8□□□□□ -1
SDCBP-203ENST00000424270 EPS15P42566 896 aa8.8□□□□□ -1
SDCBP-203ENST00000424270 HUNKP57058 714 aa8.8□□□□□ -1
SDCBP-203ENST00000424270 PRR5LQ6MZQ0 368 aa8.8□□□□□ -1
SDCBP-203ENST00000424270 RTKN2Q8IZC4 609 aa8.8□□□□□ -1
SDCBP-203ENST00000424270 SYNE4Q8N205 404 aa8.8□□□□□ -1
SDCBP-203ENST00000424270 EYA1Q99502 592 aa8.8□□□□□ -1
SDCBP-203ENST00000424270 SAGE1Q9NXZ1 904 aa8.8□□□□□ -1
SDCBP-203ENST00000424270 KIF24Q5T7B8 1368 aa8.8□□□□□ -1
SDCBP-203ENST00000424270 ADAMTSL1Q8N6G6 1762 aa8.8□□□□□ -1
SDCBP-203ENST00000424270 MYH14Q7Z406 1995 aaKnown RBP8.79□□□□□ -1
SDCBP-203ENST00000424270 TONSLQ96HA7 1378 aa8.79□□□□□ -1
SDCBP-203ENST00000424270 A0A087WZG4 1122 aa8.79□□□□□ -1
SDCBP-203ENST00000424270 ATXN8OSP0DMR3 200 aa8.79□□□□□ -1
SDCBP-203ENST00000424270 TBC1D9BQ66K14 1250 aa8.79□□□□□ -1
SDCBP-203ENST00000424270 HHIPL1Q96JK4 782 aa8.79□□□□□ -1
SDCBP-203ENST00000424270 SETDB2Q96T68 719 aa8.79□□□□□ -1
SDCBP-203ENST00000424270 GLIS2Q9BZE0 524 aaPredicted RBP8.79□□□□□ -1
SDCBP-203ENST00000424270 ZBTB1Q9Y2K1 713 aa8.79□□□□□ -1
SDCBP-203ENST00000424270 FZD9O00144 591 aa8.78□□□□□ -1
SDCBP-203ENST00000424270 SRGNP10124 158 aa8.78□□□□□ -1
SDCBP-203ENST00000424270 PKN2Q16513 984 aaKnown RBP8.78□□□□□ -1
SDCBP-203ENST00000424270 ZIC5Q96T25 663 aa8.78□□□□□ -1
SDCBP-203ENST00000424270 BCL2L12Q9HB09 334 aa8.78□□□□□ -1
SDCBP-203ENST00000424270 RNF186Q9NXI6 227 aa8.78□□□□□ -1
SDCBP-203ENST00000424270 NRXN2Q9P2S2 1712 aa8.77□□□□□ -1
SDCBP-203ENST00000424270 CYP19A1P11511 503 aaPredicted RBP8.77□□□□□ -1.01
SDCBP-203ENST00000424270 KIF23Q02241 960 aaPredicted RBP8.77□□□□□ -1.01
SDCBP-203ENST00000424270 NEUROD1Q13562 356 aa8.77□□□□□ -1.01
SDCBP-203ENST00000424270 OLFM4Q6UX06 510 aa8.77□□□□□ -1.01
SDCBP-203ENST00000424270 LARGE2Q8N3Y3 721 aa8.77□□□□□ -1.01
SDCBP-203ENST00000424270 CACNA1SQ13698 1873 aa8.77□□□□□ -1.01
SDCBP-203ENST00000424270 NPR1P16066 1061 aa8.76□□□□□ -1.01
SDCBP-203ENST00000424270 SCNN1DP51172 638 aa8.76□□□□□ -1.01
SDCBP-203ENST00000424270 ZNF157P51786 506 aaPredicted RBP8.76□□□□□ -1.01
SDCBP-203ENST00000424270 AMOTQ4VCS5 1084 aa8.76□□□□□ -1.01
SDCBP-203ENST00000424270 NBPF5PQ86XG9 351 aaPredicted RBP8.76□□□□□ -1.01
SDCBP-203ENST00000424270 CCDC102AQ96A19 550 aa8.76□□□□□ -1.01
SDCBP-203ENST00000424270 ADARB2Q9NS39 739 aaKnown RBP8.76□□□□□ -1.01
SDCBP-203ENST00000424270 TBC1D2BQ9UPU7 963 aa8.76□□□□□ -1.01
SDCBP-203ENST00000424270 ZBTB12Q9Y330 459 aaPredicted RBP8.76□□□□□ -1.01
SDCBP-203ENST00000424270 COL11A2P13942 1736 aaPredicted RBP8.76□□□□□ -1.01
SDCBP-203ENST00000424270 TJP1Q07157 1748 aa8.76□□□□□ -1.01
SDCBP-203ENST00000424270 SLX4Q8IY92 1834 aa8.75□□□□□ -1.01
SDCBP-203ENST00000424270 TRPM7Q96QT4 1865 aa8.75□□□□□ -1.01
SDCBP-203ENST00000424270 STARD3NLO95772 234 aa8.75□□□□□ -1.01
SDCBP-203ENST00000424270 RGMBQ6NW40 437 aa8.75□□□□□ -1.01
SDCBP-203ENST00000424270 NIM1KQ8IY84 436 aa8.75□□□□□ -1.01
SDCBP-203ENST00000424270 C2orf69Q8N8R5 385 aa8.75□□□□□ -1.01
SDCBP-203ENST00000424270 PUS7Q96PZ0 661 aaKnown RBP8.75□□□□□ -1.01
SDCBP-203ENST00000424270 SLC24A1O60721 1099 aa8.74□□□□□ -1.01
SDCBP-203ENST00000424270 GTF2E1P29083 439 aaPredicted RBP8.74□□□□□ -1.01
SDCBP-203ENST00000424270 TNNT2P45379 298 aaPredicted RBP8.74□□□□□ -1.01
SDCBP-203ENST00000424270 CDC37L1Q7L3B6 337 aa8.74□□□□□ -1.01
SDCBP-203ENST00000424270 BCL2L13Q9BXK5 485 aa8.74□□□□□ -1.01
SDCBP-203ENST00000424270 TMX4Q9H1E5 349 aaPredicted RBP8.74□□□□□ -1.01
SDCBP-203ENST00000424270 COLQQ9Y215 455 aaPredicted RBP8.74□□□□□ -1.01
SDCBP-203ENST00000424270 NCAPD2Q15021 1401 aa8.73□□□□□ -1.01
SDCBP-203ENST00000424270 ANKRD31Q8N7Z5 1873 aa8.73□□□□□ -1.01
SDCBP-203ENST00000424270 FAM177BA6PVY3 158 aa8.73□□□□□ -1.01
SDCBP-203ENST00000424270 ALDH1B1P30837 517 aa8.73□□□□□ -1.01
SDCBP-203ENST00000424270 SLC39A6Q13433 755 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms