RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 NBPF26B4DH59 902 aa15.75■□□□□ 0.11
PLOD3-204ENST00000424135 DDNO94850 711 aaPredicted RBP15.75■□□□□ 0.11
PLOD3-204ENST00000424135 SRGNP10124 158 aa15.75■□□□□ 0.11
PLOD3-204ENST00000424135 NBPF10Q6P3W6 841 aaKnown RBP15.75■□□□□ 0.11
PLOD3-204ENST00000424135 OLFM4Q6UX06 510 aa15.75■□□□□ 0.11
PLOD3-204ENST00000424135 NBPF15Q8N660 670 aa15.75■□□□□ 0.11
PLOD3-204ENST00000424135 TAOK3Q9H2K8 898 aa15.74■□□□□ 0.11
PLOD3-204ENST00000424135 BCORQ6W2J9 1755 aa15.73■□□□□ 0.11
PLOD3-204ENST00000424135 CAPN15O75808 1086 aa15.73■□□□□ 0.11
PLOD3-204ENST00000424135 STYK1Q6J9G0 422 aa15.73■□□□□ 0.11
PLOD3-204ENST00000424135 C7orf43Q8WVR3 580 aa15.73■□□□□ 0.11
PLOD3-204ENST00000424135 MIS18AQ9NYP9 233 aa15.73■□□□□ 0.11
PLOD3-204ENST00000424135 LTBP3Q9NS15 1303 aa15.72■□□□□ 0.11
PLOD3-204ENST00000424135 HSPA1AP0DMV8 641 aaKnown RBP15.72■□□□□ 0.11
PLOD3-204ENST00000424135 HSPA1BP0DMV9 641 aaKnown RBP15.72■□□□□ 0.11
PLOD3-204ENST00000424135 PPP2R1AP30153 589 aa15.72■□□□□ 0.11
PLOD3-204ENST00000424135 ST5P78524 1137 aa15.72■□□□□ 0.11
PLOD3-204ENST00000424135 DPY19L2Q6NUT2 758 aa15.72■□□□□ 0.11
PLOD3-204ENST00000424135 CNKSR1Q969H4 720 aa15.72■□□□□ 0.11
PLOD3-204ENST00000424135 MASTLQ96GX5 879 aa15.72■□□□□ 0.11
PLOD3-204ENST00000424135 PDZRN3Q9UPQ7 1066 aa15.72■□□□□ 0.11
PLOD3-204ENST00000424135 CACNA1SQ13698 1873 aa15.71■□□□□ 0.11
PLOD3-204ENST00000424135 DICER1Q9UPY3 1922 aaKnown RBP15.71■□□□□ 0.11
PLOD3-204ENST00000424135 FAM177BA6PVY3 158 aa15.71■□□□□ 0.11
PLOD3-204ENST00000424135 NPHP1O15259 732 aa15.71■□□□□ 0.11
PLOD3-204ENST00000424135 U2AF1L5P0DN76 240 aaPredicted RBP15.71■□□□□ 0.11
PLOD3-204ENST00000424135 U2AF1Q01081 240 aaKnown RBP eCLIP15.71■□□□□ 0.11
PLOD3-204ENST00000424135 NBPF5PQ86XG9 351 aaPredicted RBP15.71■□□□□ 0.11
PLOD3-204ENST00000424135 SNRPA1P09661 255 aaKnown RBP15.7■□□□□ 0.1
PLOD3-204ENST00000424135 HLFQ16534 295 aa15.7■□□□□ 0.1
PLOD3-204ENST00000424135 SLC51AQ86UW1 340 aa15.7■□□□□ 0.1
PLOD3-204ENST00000424135 CHADLQ6NUI6 762 aa15.69■□□□□ 0.1
PLOD3-204ENST00000424135 NPM2Q86SE8 214 aaKnown RBP15.69■□□□□ 0.1
PLOD3-204ENST00000424135 TNS4Q8IZW8 715 aa15.69■□□□□ 0.1
PLOD3-204ENST00000424135 CFAP53Q96M91 514 aa15.69■□□□□ 0.1
PLOD3-204ENST00000424135 ZNF277Q9NRM2 450 aaPredicted RBP15.69■□□□□ 0.1
PLOD3-204ENST00000424135 ZNF541Q9H0D2 1346 aa15.68■□□□□ 0.1
PLOD3-204ENST00000424135 KLRG2A4D1S0 409 aaPredicted RBP15.68■□□□□ 0.1
PLOD3-204ENST00000424135 CLEC4GQ6UXB4 293 aa15.68■□□□□ 0.1
PLOD3-204ENST00000424135 MKRN1Q9UHC7 482 aaKnown RBP15.68■□□□□ 0.1
PLOD3-204ENST00000424135 NIP7Q9Y221 180 aaKnown RBP eCLIP15.68■□□□□ 0.1
PLOD3-204ENST00000424135 NPR1P16066 1061 aa15.67■□□□□ 0.1
PLOD3-204ENST00000424135 RTF1Q92541 710 aaKnown RBP15.67■□□□□ 0.1
PLOD3-204ENST00000424135 ARFGEF2Q9Y6D5 1785 aa15.67■□□□□ 0.1
PLOD3-204ENST00000424135 TAF1DQ9H5J8 278 aaPredicted RBP15.66■□□□□ 0.1
PLOD3-204ENST00000424135 NUDCQ9Y266 331 aa15.66■□□□□ 0.1
PLOD3-204ENST00000424135 ABCC12Q96J65 1359 aa15.65■□□□□ 0.1
PLOD3-204ENST00000424135 CCDC93Q567U6 631 aa15.65■□□□□ 0.1
PLOD3-204ENST00000424135 NGEFQ8N5V2 710 aa15.65■□□□□ 0.1
PLOD3-204ENST00000424135 THUMPD2Q9BTF0 503 aaKnown RBP15.65■□□□□ 0.1
PLOD3-204ENST00000424135 CREBZFQ9NS37 354 aa15.65■□□□□ 0.1
PLOD3-204ENST00000424135 PASKQ96RG2 1323 aa15.65■□□□□ 0.1
PLOD3-204ENST00000424135 FKBP4Q02790 459 aaKnown RBP eCLIP15.64■□□□□ 0.09
PLOD3-204ENST00000424135 TAF7Q15545 349 aaPredicted RBP15.64■□□□□ 0.09
PLOD3-204ENST00000424135 SOGA3Q5TF21 947 aa15.64■□□□□ 0.09
PLOD3-204ENST00000424135 TPTE2Q6XPS3 522 aa15.64■□□□□ 0.09
PLOD3-204ENST00000424135 TTLL7Q6ZT98 887 aa15.64■□□□□ 0.09
PLOD3-204ENST00000424135 NUTM1Q86Y26 1132 aa15.64■□□□□ 0.09
PLOD3-204ENST00000424135 L3MBTL3Q96JM7 780 aaPredicted RBP15.64■□□□□ 0.09
PLOD3-204ENST00000424135 ZNF652Q9Y2D9 606 aa15.64■□□□□ 0.09
PLOD3-204ENST00000424135 SNED1Q8TER0 1413 aa15.63■□□□□ 0.09
PLOD3-204ENST00000424135 ITGBL1O95965 494 aaPredicted RBP15.63■□□□□ 0.09
PLOD3-204ENST00000424135 COL4A5P29400 1685 aa15.63■□□□□ 0.09
PLOD3-204ENST00000424135 HTATSF1O43719 755 aaKnown RBP15.62■□□□□ 0.09
PLOD3-204ENST00000424135 LDHDQ86WU2 507 aa15.62■□□□□ 0.09
PLOD3-204ENST00000424135 SYNE4Q8N205 404 aa15.62■□□□□ 0.09
PLOD3-204ENST00000424135 EAPPQ56P03 285 aaPredicted RBP15.61■□□□□ 0.09
PLOD3-204ENST00000424135 C3orf67Q6ZVT6 689 aa15.61■□□□□ 0.09
PLOD3-204ENST00000424135 RRP7AQ9Y3A4 280 aaKnown RBP15.61■□□□□ 0.09
PLOD3-204ENST00000424135 RNF123Q5XPI4 1314 aa15.61■□□□□ 0.09
PLOD3-204ENST00000424135 CNTNAP1P78357 1384 aa15.61■□□□□ 0.09
PLOD3-204ENST00000424135 IQCA1LA6NCM1 817 aa15.6■□□□□ 0.09
PLOD3-204ENST00000424135 FOXN1O15353 648 aa15.6■□□□□ 0.09
PLOD3-204ENST00000424135 GPTP24298 496 aa15.6■□□□□ 0.09
PLOD3-204ENST00000424135 IARSP41252 1262 aaKnown RBP15.6■□□□□ 0.09
PLOD3-204ENST00000424135 EIF4A1P60842 406 aaKnown RBP15.6■□□□□ 0.09
PLOD3-204ENST00000424135 PLEKHF1Q96S99 279 aa15.6■□□□□ 0.09
PLOD3-204ENST00000424135 UBN2Q6ZU65 1347 aa15.6■□□□□ 0.09
PLOD3-204ENST00000424135 FZD9O00144 591 aa15.59■□□□□ 0.09
PLOD3-204ENST00000424135 RGL2O15211 777 aa15.59■□□□□ 0.09
PLOD3-204ENST00000424135 EPHX2P34913 555 aa15.59■□□□□ 0.09
PLOD3-204ENST00000424135 VEGFBP49765 207 aa15.59■□□□□ 0.09
PLOD3-204ENST00000424135 CRY2Q49AN0 593 aa15.59■□□□□ 0.09
PLOD3-204ENST00000424135 MAP1SQ66K74 1059 aaPredicted RBP15.59■□□□□ 0.09
PLOD3-204ENST00000424135 RTKN2Q8IZC4 609 aa15.59■□□□□ 0.09
PLOD3-204ENST00000424135 ZBTB3Q9H5J0 574 aa15.59■□□□□ 0.09
PLOD3-204ENST00000424135 HACL1Q9UJ83 578 aa15.59■□□□□ 0.09
PLOD3-204ENST00000424135 KDM3BQ7LBC6 1761 aa15.58■□□□□ 0.08
PLOD3-204ENST00000424135 ADAMTSL1Q8N6G6 1762 aa15.58■□□□□ 0.08
PLOD3-204ENST00000424135 MYL6BP14649 208 aa15.58■□□□□ 0.08
PLOD3-204ENST00000424135 GTF2E1P29083 439 aaPredicted RBP15.58■□□□□ 0.08
PLOD3-204ENST00000424135 FMR1Q06787 632 aaKnown RBP eCLIP15.58■□□□□ 0.08
PLOD3-204ENST00000424135 SUSD4Q5VX71 490 aa15.58■□□□□ 0.08
PLOD3-204ENST00000424135 CLEC11AQ9Y240 323 aa15.58■□□□□ 0.08
PLOD3-204ENST00000424135 SCN4AP35499 1836 aa15.58■□□□□ 0.08
PLOD3-204ENST00000424135 MAP3K15Q6ZN16 1313 aa15.58■□□□□ 0.08
PLOD3-204ENST00000424135 LAMB4A4D0S4 1761 aa15.57■□□□□ 0.08
PLOD3-204ENST00000424135 DLG5Q8TDM6 1919 aa15.57■□□□□ 0.08
PLOD3-204ENST00000424135 ERVV-1B6SEH8 477 aa15.57■□□□□ 0.08
PLOD3-204ENST00000424135 TCERG1O14776 1098 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms