RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-204ENST00000424089 SIK1P57059 783 aa12.58□□□□□ -0.4
POLR1A-204ENST00000424089 AKAP4Q5JQC9 854 aa12.58□□□□□ -0.4
POLR1A-204ENST00000424089 CCDC30Q5VVM6 783 aa12.58□□□□□ -0.4
POLR1A-204ENST00000424089 RBM46Q8TBY0 533 aaKnown RBP12.58□□□□□ -0.4
POLR1A-204ENST00000424089 SPG7Q9UQ90 795 aa12.58□□□□□ -0.4
POLR1A-204ENST00000424089 NOP58Q9Y2X3 529 aaKnown RBP12.58□□□□□ -0.4
POLR1A-204ENST00000424089 N4BP2Q86UW6 1770 aaPredicted RBP12.58□□□□□ -0.4
POLR1A-204ENST00000424089 CEMIPQ8WUJ3 1361 aa12.57□□□□□ -0.4
POLR1A-204ENST00000424089 WDR90Q96KV7 1748 aa12.57□□□□□ -0.4
POLR1A-204ENST00000424089 GNPATO15228 680 aa12.57□□□□□ -0.4
POLR1A-204ENST00000424089 TGFB2P61812 414 aa12.57□□□□□ -0.4
POLR1A-204ENST00000424089 ARHGAP27Q6ZUM4 889 aa12.57□□□□□ -0.4
POLR1A-204ENST00000424089 IL17REQ8NFR9 667 aa12.57□□□□□ -0.4
POLR1A-204ENST00000424089 PIGBQ92521 554 aa12.57□□□□□ -0.4
POLR1A-204ENST00000424089 STK31Q9BXU1 1019 aa12.57□□□□□ -0.4
POLR1A-204ENST00000424089 TMOD3Q9NYL9 352 aa12.57□□□□□ -0.4
POLR1A-204ENST00000424089 BCS1LQ9Y276 419 aa12.57□□□□□ -0.4
POLR1A-204ENST00000424089 SLC4A2P04920 1241 aa12.56□□□□□ -0.4
POLR1A-204ENST00000424089 MMP10P09238 476 aa12.56□□□□□ -0.4
POLR1A-204ENST00000424089 CCT4P50991 539 aaKnown RBP12.56□□□□□ -0.4
POLR1A-204ENST00000424089 NUCB1Q02818 461 aa12.56□□□□□ -0.4
POLR1A-204ENST00000424089 AMIGO3Q86WK7 504 aa12.56□□□□□ -0.4
POLR1A-204ENST00000424089 SKAP1Q86WV1 359 aa12.56□□□□□ -0.4
POLR1A-204ENST00000424089 RPAP2Q8IXW5 612 aaPredicted RBP12.56□□□□□ -0.4
POLR1A-204ENST00000424089 PXDNLA1KZ92 1463 aa12.55□□□□□ -0.4
POLR1A-204ENST00000424089 SLC34A2O95436 690 aa12.55□□□□□ -0.4
POLR1A-204ENST00000424089 ATP6V1AP38606 617 aa12.55□□□□□ -0.4
POLR1A-204ENST00000424089 FSTL1Q12841 308 aa12.55□□□□□ -0.4
POLR1A-204ENST00000424089 NKX1-1Q15270 411 aaPredicted RBP12.55□□□□□ -0.4
POLR1A-204ENST00000424089 SMIM5Q71RC9 77 aa12.55□□□□□ -0.4
POLR1A-204ENST00000424089 LINC00116Q8NCU8 138 aa12.55□□□□□ -0.4
POLR1A-204ENST00000424089 EIF5BO60841 1220 aaKnown RBP12.54□□□□□ -0.4
POLR1A-204ENST00000424089 NLGN1Q8N2Q7 840 aa12.54□□□□□ -0.4
POLR1A-204ENST00000424089 CCDC87Q9NVE4 849 aa12.54□□□□□ -0.4
POLR1A-204ENST00000424089 KIAA1551Q9HCM1 1747 aa12.54□□□□□ -0.4
POLR1A-204ENST00000424089 HSPA1AP0DMV8 641 aaKnown RBP12.53□□□□□ -0.4
POLR1A-204ENST00000424089 HSPA1BP0DMV9 641 aaKnown RBP12.53□□□□□ -0.4
POLR1A-204ENST00000424089 C1orf141Q5JVX7 400 aa12.53□□□□□ -0.4
POLR1A-204ENST00000424089 TRAPPC3LQ5T215 181 aa12.53□□□□□ -0.4
POLR1A-204ENST00000424089 CHD1LQ86WJ1 897 aa12.53□□□□□ -0.4
POLR1A-204ENST00000424089 UPF2Q9HAU5 1272 aaKnown RBP12.53□□□□□ -0.4
POLR1A-204ENST00000424089 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.53□□□□□ -0.43e-6■■□□□ 12.2
POLR1A-204ENST00000424089 MIS18AQ9NYP9 233 aa12.53□□□□□ -0.4
POLR1A-204ENST00000424089 RTCBQ9Y3I0 505 aaKnown RBP12.53□□□□□ -0.4
POLR1A-204ENST00000424089 ARFGEF1Q9Y6D6 1849 aa12.53□□□□□ -0.4
POLR1A-204ENST00000424089 A0A0G2JLW4 131 aa12.52□□□□□ -0.41
POLR1A-204ENST00000424089 KRT24Q2M2I5 525 aa12.52□□□□□ -0.41
POLR1A-204ENST00000424089 ZNF530Q6P9A1 599 aaPredicted RBP12.52□□□□□ -0.41
POLR1A-204ENST00000424089 NPM2Q86SE8 214 aaKnown RBP12.52□□□□□ -0.41
POLR1A-204ENST00000424089 IFNL2Q8IZJ0 200 aa12.52□□□□□ -0.41
POLR1A-204ENST00000424089 ASAP1Q9ULH1 1129 aa12.52□□□□□ -0.41
POLR1A-204ENST00000424089 PARP3Q9Y6F1 533 aa12.52□□□□□ -0.41
POLR1A-204ENST00000424089 BRCA1P38398 1863 aaKnown RBP12.52□□□□□ -0.41
POLR1A-204ENST00000424089 C10orf71Q711Q0 1435 aa12.52□□□□□ -0.41
POLR1A-204ENST00000424089 C4AP0C0L4 1744 aa12.51□□□□□ -0.41
POLR1A-204ENST00000424089 ADRA2BP18089 450 aa12.51□□□□□ -0.41
POLR1A-204ENST00000424089 TEFQ10587 303 aa12.51□□□□□ -0.41
POLR1A-204ENST00000424089 ITPK1Q13572 414 aa12.51□□□□□ -0.41
POLR1A-204ENST00000424089 ANKRD44Q8N8A2 993 aa12.51□□□□□ -0.41
POLR1A-204ENST00000424089 RNMTO43148 476 aaKnown RBP12.5□□□□□ -0.41
POLR1A-204ENST00000424089 HMMRO75330 724 aa12.5□□□□□ -0.41
POLR1A-204ENST00000424089 RFC4P35249 363 aa12.5□□□□□ -0.41
POLR1A-204ENST00000424089 EIF4A1P60842 406 aaKnown RBP12.5□□□□□ -0.41
POLR1A-204ENST00000424089 C9orf131Q5VYM1 1079 aa12.5□□□□□ -0.41
POLR1A-204ENST00000424089 DCTPP1Q9H773 170 aa12.5□□□□□ -0.41
POLR1A-204ENST00000424089 ZNF831Q5JPB2 1677 aa12.5□□□□□ -0.41
POLR1A-204ENST00000424089 TNRC6CQ9HCJ0 1690 aaKnown RBP12.49□□□□□ -0.41
POLR1A-204ENST00000424089 GNAI3P08754 354 aa12.49□□□□□ -0.41
POLR1A-204ENST00000424089 DPEP1P16444 411 aa12.49□□□□□ -0.41
POLR1A-204ENST00000424089 FLIIQ13045 1269 aa12.49□□□□□ -0.41
POLR1A-204ENST00000424089 RRAGCQ9HB90 399 aa12.49□□□□□ -0.41
POLR1A-204ENST00000424089 DAXXQ9UER7 740 aaPredicted RBP12.49□□□□□ -0.41
POLR1A-204ENST00000424089 BTBD11A6QL63 1104 aa12.48□□□□□ -0.41
POLR1A-204ENST00000424089 PHKG2P15735 406 aa12.48□□□□□ -0.41
POLR1A-204ENST00000424089 HDGFL1Q5TGJ6 251 aa12.48□□□□□ -0.41
POLR1A-204ENST00000424089 SIRT2Q8IXJ6 389 aa12.48□□□□□ -0.41
POLR1A-204ENST00000424089 SMC1BQ8NDV3 1235 aa12.48□□□□□ -0.41
POLR1A-204ENST00000424089 RBM42Q9BTD8 480 aaKnown RBP12.48□□□□□ -0.41
POLR1A-204ENST00000424089 ATG3Q9NT62 314 aa12.48□□□□□ -0.41
POLR1A-204ENST00000424089 PIM2Q9P1W9 311 aa12.48□□□□□ -0.41
POLR1A-204ENST00000424089 COL5A3P25940 1745 aaPredicted RBP12.48□□□□□ -0.41
POLR1A-204ENST00000424089 BMP2KLQ5H9B9 411 aa12.47□□□□□ -0.41
POLR1A-204ENST00000424089 RC3H1Q5TC82 1133 aaKnown RBP12.47□□□□□ -0.41
POLR1A-204ENST00000424089 ANKRD45Q5TZF3 282 aa12.47□□□□□ -0.41
POLR1A-204ENST00000424089 ARHGEF1Q92888 912 aaKnown RBP12.47□□□□□ -0.41
POLR1A-204ENST00000424089 LGR6Q9HBX8 967 aa12.47□□□□□ -0.41
POLR1A-204ENST00000424089 PCNTO95613 3336 aa12.47□□□□□ -0.41
POLR1A-204ENST00000424089 CNTNAP4Q9C0A0 1308 aa12.46□□□□□ -0.41
POLR1A-204ENST00000424089 GNAI2P04899 355 aa12.46□□□□□ -0.41
POLR1A-204ENST00000424089 HSP90AB1P08238 724 aaKnown RBP12.46□□□□□ -0.41
POLR1A-204ENST00000424089 GYS1P13807 737 aa12.46□□□□□ -0.41
POLR1A-204ENST00000424089 FKBP5Q13451 457 aaPredicted RBP12.46□□□□□ -0.41
POLR1A-204ENST00000424089 DALRD3Q5D0E6 543 aaKnown RBP12.46□□□□□ -0.41
POLR1A-204ENST00000424089 CEP85Q6P2H3 762 aa12.46□□□□□ -0.41
POLR1A-204ENST00000424089 RNF181Q9P0P0 153 aa12.46□□□□□ -0.41
POLR1A-204ENST00000424089 KCPQ6ZWJ8 1503 aa12.46□□□□□ -0.42
POLR1A-204ENST00000424089 SBF1O95248 1867 aa12.45□□□□□ -0.42
POLR1A-204ENST00000424089 ERVV-2B6SEH9 535 aa12.45□□□□□ -0.42
POLR1A-204ENST00000424089 RPS6KA4O75676 772 aa12.45□□□□□ -0.42
POLR1A-204ENST00000424089 G2E3Q7L622 706 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms