RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 LOC102724428A0A0B4J2F2 783 aa11.38□□□□□ -0.59
CLCN3P1-201ENST00000423965 EVI5O60447 810 aa11.38□□□□□ -0.59
CLCN3P1-201ENST00000423965 SIK1P57059 783 aa11.38□□□□□ -0.59
CLCN3P1-201ENST00000423965 PRPF38BQ5VTL8 546 aaKnown RBP11.38□□□□□ -0.59
CLCN3P1-201ENST00000423965 PPARGC1BQ86YN6 1023 aaKnown RBP11.38□□□□□ -0.59
CLCN3P1-201ENST00000423965 KTN1Q86UP2 1357 aaKnown RBP11.38□□□□□ -0.59
CLCN3P1-201ENST00000423965 PASKQ96RG2 1323 aa11.37□□□□□ -0.59
CLCN3P1-201ENST00000423965 LTV1Q96GA3 475 aaPredicted RBP11.37□□□□□ -0.59
CLCN3P1-201ENST00000423965 RASSF10A6NK89 507 aa11.36□□□□□ -0.59
CLCN3P1-201ENST00000423965 DPYSL4O14531 572 aa11.36□□□□□ -0.59
CLCN3P1-201ENST00000423965 DEFB115Q30KQ5 88 aa11.36□□□□□ -0.59
CLCN3P1-201ENST00000423965 RTCBQ9Y3I0 505 aaKnown RBP11.36□□□□□ -0.59
CLCN3P1-201ENST00000423965 VIRMAQ69YN4 1812 aaKnown RBP11.35□□□□□ -0.59
CLCN3P1-201ENST00000423965 GYS1P13807 737 aa11.35□□□□□ -0.59
CLCN3P1-201ENST00000423965 RASSF7Q02833 373 aa11.35□□□□□ -0.59
CLCN3P1-201ENST00000423965 NBPF1Q3BBV0 1214 aa11.35□□□□□ -0.59
CLCN3P1-201ENST00000423965 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.35□□□□□ -0.59
CLCN3P1-201ENST00000423965 ZNF687Q8N1G0 1237 aa11.35□□□□□ -0.59
CLCN3P1-201ENST00000423965 PIGBQ92521 554 aa11.35□□□□□ -0.59
CLCN3P1-201ENST00000423965 BEGAINQ9BUH8 593 aa11.35□□□□□ -0.59
CLCN3P1-201ENST00000423965 FAM208AQ9UK61 1670 aaKnown RBP11.35□□□□□ -0.59
CLCN3P1-201ENST00000423965 WDR33Q9C0J8 1336 aaKnown RBP11.35□□□□□ -0.59
CLCN3P1-201ENST00000423965 LTN1O94822 1766 aa11.34□□□□□ -0.59
CLCN3P1-201ENST00000423965 RAPGEF4Q8WZA2 1011 aa11.34□□□□□ -0.59
CLCN3P1-201ENST00000423965 ARHGEF1Q92888 912 aaKnown RBP11.34□□□□□ -0.59
CLCN3P1-201ENST00000423965 MEGF6O75095 1541 aa11.34□□□□□ -0.59
CLCN3P1-201ENST00000423965 PCDH11XQ9BZA7 1347 aa11.34□□□□□ -0.59
CLCN3P1-201ENST00000423965 PCDH11YQ9BZA8 1340 aa11.34□□□□□ -0.59
CLCN3P1-201ENST00000423965 C4AP0C0L4 1744 aa11.33□□□□□ -0.6
CLCN3P1-201ENST00000423965 RFC4P35249 363 aa11.33□□□□□ -0.6
CLCN3P1-201ENST00000423965 ATP6V1AP38606 617 aa11.33□□□□□ -0.6
CLCN3P1-201ENST00000423965 ITPK1Q13572 414 aa11.33□□□□□ -0.6
CLCN3P1-201ENST00000423965 LDHDQ86WU2 507 aa11.33□□□□□ -0.6
CLCN3P1-201ENST00000423965 NME9Q86XW9 330 aa11.33□□□□□ -0.6
CLCN3P1-201ENST00000423965 MCOLN1Q9GZU1 580 aa11.33□□□□□ -0.6
CLCN3P1-201ENST00000423965 ITGBL1O95965 494 aaPredicted RBP11.32□□□□□ -0.6
CLCN3P1-201ENST00000423965 TATP17735 454 aaPredicted RBP11.32□□□□□ -0.6
CLCN3P1-201ENST00000423965 CHRNA5P30532 468 aa11.32□□□□□ -0.6
CLCN3P1-201ENST00000423965 RC3H1Q5TC82 1133 aaKnown RBP11.32□□□□□ -0.6
CLCN3P1-201ENST00000423965 CD163L1Q9NR16 1453 aa11.32□□□□□ -0.6
CLCN3P1-201ENST00000423965 PPP4R3BQ5MIZ7 849 aa11.31□□□□□ -0.6
CLCN3P1-201ENST00000423965 ZNF454Q8N9F8 522 aa11.31□□□□□ -0.6
CLCN3P1-201ENST00000423965 IQCA1LA6NCM1 817 aa11.3□□□□□ -0.6
CLCN3P1-201ENST00000423965 HOXC9P31274 260 aa11.3□□□□□ -0.6
CLCN3P1-201ENST00000423965 NBPF6Q5VWK0 638 aa11.3□□□□□ -0.6
CLCN3P1-201ENST00000423965 GCC1Q96CN9 775 aa11.3□□□□□ -0.6
CLCN3P1-201ENST00000423965 NBPF4Q96M43 638 aa11.3□□□□□ -0.6
CLCN3P1-201ENST00000423965 MAP3K19Q56UN5 1328 aa11.3□□□□□ -0.6
CLCN3P1-201ENST00000423965 MAP2P11137 1827 aaKnown RBP11.3□□□□□ -0.6
CLCN3P1-201ENST00000423965 CYP27B1O15528 508 aa11.29□□□□□ -0.6
CLCN3P1-201ENST00000423965 CA12O43570 354 aa11.29□□□□□ -0.6
CLCN3P1-201ENST00000423965 RPS6KA4O75676 772 aa11.29□□□□□ -0.6
CLCN3P1-201ENST00000423965 AMPHP49418 695 aa11.29□□□□□ -0.6
CLCN3P1-201ENST00000423965 KRTAP3-3Q9BYR6 98 aa11.29□□□□□ -0.6
CLCN3P1-201ENST00000423965 KRTAP3-2Q9BYR7 98 aa11.29□□□□□ -0.6
CLCN3P1-201ENST00000423965 SBNO2Q9Y2G9 1366 aa11.28□□□□□ -0.6
CLCN3P1-201ENST00000423965 ECE1P42892 770 aa11.28□□□□□ -0.6
CLCN3P1-201ENST00000423965 ERFEQ4G0M1 354 aa11.28□□□□□ -0.6
CLCN3P1-201ENST00000423965 TTLL6Q8N841 843 aa11.28□□□□□ -0.6
CLCN3P1-201ENST00000423965 ASAP1Q9ULH1 1129 aa11.28□□□□□ -0.6
CLCN3P1-201ENST00000423965 NFKBIEO00221 500 aa11.27□□□□□ -0.61
CLCN3P1-201ENST00000423965 SMG6Q86US8 1419 aaKnown RBP11.26□□□□□ -0.61
CLCN3P1-201ENST00000423965 DDNO94850 711 aaPredicted RBP11.26□□□□□ -0.61
CLCN3P1-201ENST00000423965 MAP2K2P36507 400 aa11.26□□□□□ -0.61
CLCN3P1-201ENST00000423965 DDR1Q08345 913 aa11.26□□□□□ -0.61
CLCN3P1-201ENST00000423965 GPR101Q96P66 508 aaPredicted RBP11.26□□□□□ -0.61
CLCN3P1-201ENST00000423965 TAF1DQ9H5J8 278 aaPredicted RBP11.26□□□□□ -0.61
CLCN3P1-201ENST00000423965 TMOD3Q9NYL9 352 aa11.26□□□□□ -0.61
CLCN3P1-201ENST00000423965 CNTNAP4Q9C0A0 1308 aa11.26□□□□□ -0.61
CLCN3P1-201ENST00000423965 ITGB4P16144 1822 aa11.25□□□□□ -0.61
CLCN3P1-201ENST00000423965 TM4SF1P30408 202 aa11.25□□□□□ -0.61
CLCN3P1-201ENST00000423965 DGKZQ13574 1117 aa11.25□□□□□ -0.61
CLCN3P1-201ENST00000423965 HDGFL2Q7Z4V5 671 aaPredicted RBP11.25□□□□□ -0.61
CLCN3P1-201ENST00000423965 PLSCR2Q9NRY7 297 aa11.25□□□□□ -0.61
CLCN3P1-201ENST00000423965 ATG3Q9NT62 314 aa11.25□□□□□ -0.61
CLCN3P1-201ENST00000423965 ABT1Q9ULW3 272 aaKnown RBP11.25□□□□□ -0.61
CLCN3P1-201ENST00000423965 CCDC88AQ3V6T2 1871 aa11.25□□□□□ -0.61
CLCN3P1-201ENST00000423965 MON2Q7Z3U7 1717 aa11.24□□□□□ -0.61
CLCN3P1-201ENST00000423965 POLRMTO00411 1230 aaKnown RBP11.24□□□□□ -0.61
CLCN3P1-201ENST00000423965 FOSBP53539 338 aa11.24□□□□□ -0.61
CLCN3P1-201ENST00000423965 CAPNS2Q96L46 248 aa11.24□□□□□ -0.61
CLCN3P1-201ENST00000423965 TIAM2Q8IVF5 1701 aa11.23□□□□□ -0.61
CLCN3P1-201ENST00000423965 SPDYE16A6NNV3 312 aaPredicted RBP11.23□□□□□ -0.61
CLCN3P1-201ENST00000423965 PBX2P40425 430 aa11.23□□□□□ -0.61
CLCN3P1-201ENST00000423965 CNTROBQ8N137 903 aa11.23□□□□□ -0.61
CLCN3P1-201ENST00000423965 USHBP1Q8N6Y0 703 aa11.23□□□□□ -0.61
CLCN3P1-201ENST00000423965 EDC4Q6P2E9 1401 aaKnown RBP11.23□□□□□ -0.61
CLCN3P1-201ENST00000423965 PDIA6Q15084 440 aa11.22□□□□□ -0.61
CLCN3P1-201ENST00000423965 PNMA8AQ86V59 439 aaPredicted RBP11.22□□□□□ -0.61
CLCN3P1-201ENST00000423965 KCNV2Q8TDN2 545 aa11.22□□□□□ -0.61
CLCN3P1-201ENST00000423965 DDX12PQ92771 950 aa11.22□□□□□ -0.61
CLCN3P1-201ENST00000423965 USP42Q9H9J4 1324 aaKnown RBP11.22□□□□□ -0.61
CLCN3P1-201ENST00000423965 LTBP3Q9NS15 1303 aa11.22□□□□□ -0.61
CLCN3P1-201ENST00000423965 ARIH1Q9Y4X5 557 aaPredicted RBP11.22□□□□□ -0.61
CLCN3P1-201ENST00000423965 RGPD2P0DJD1 1756 aa11.21□□□□□ -0.61
CLCN3P1-201ENST00000423965 RTL1A6NKG5 1358 aa11.21□□□□□ -0.61
CLCN3P1-201ENST00000423965 H0YIN7 160 aa11.21□□□□□ -0.61
CLCN3P1-201ENST00000423965 ARHGAP33O14559 1287 aa11.21□□□□□ -0.61
CLCN3P1-201ENST00000423965 POTEEQ6S8J3 1075 aa11.21□□□□□ -0.61
CLCN3P1-201ENST00000423965 ANKRD13DQ6ZTN6 518 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms