RNA–Protein interactions for RNA: ENST00000423108.5

RPUSD3-203, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-203ENST00000423108 MAP3K2Q9Y2U5 619 aa16.09■□□□□ 0.17
RPUSD3-203ENST00000423108 PHF14O94880 888 aa16.08■□□□□ 0.16
RPUSD3-203ENST00000423108 CAMTA2O94983 1202 aa16.08■□□□□ 0.16
RPUSD3-203ENST00000423108 IRX6P78412 446 aaPredicted RBP16.08■□□□□ 0.16
RPUSD3-203ENST00000423108 TRAPPC3LQ5T215 181 aa16.08■□□□□ 0.16
RPUSD3-203ENST00000423108 DZIP1LQ8IYY4 767 aaKnown RBP16.08■□□□□ 0.16
RPUSD3-203ENST00000423108 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.08■□□□□ 0.16
RPUSD3-203ENST00000423108 DNAAF4Q8WXU2 420 aa16.08■□□□□ 0.16
RPUSD3-203ENST00000423108 SRP68Q9UHB9 627 aaKnown RBP16.08■□□□□ 0.16
RPUSD3-203ENST00000423108 MAP3K15Q6ZN16 1313 aa16.08■□□□□ 0.16
RPUSD3-203ENST00000423108 COL15A1P39059 1388 aa16.08■□□□□ 0.16
RPUSD3-203ENST00000423108 CACNA1FO60840 1977 aa16.07■□□□□ 0.16
RPUSD3-203ENST00000423108 A0A087WZG4 1122 aa16.07■□□□□ 0.16
RPUSD3-203ENST00000423108 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.07■□□□□ 0.16
RPUSD3-203ENST00000423108 SLC15A2Q16348 729 aa16.07■□□□□ 0.16
RPUSD3-203ENST00000423108 RIC3Q7Z5B4 369 aa16.07■□□□□ 0.16
RPUSD3-203ENST00000423108 TMEM57Q8N5G2 664 aa16.07■□□□□ 0.16
RPUSD3-203ENST00000423108 BCL2L12Q9HB09 334 aa16.07■□□□□ 0.16
RPUSD3-203ENST00000423108 TFCP2L1Q9NZI6 479 aa16.07■□□□□ 0.16
RPUSD3-203ENST00000423108 ABCC4O15439 1325 aa16.07■□□□□ 0.16
RPUSD3-203ENST00000423108 DDX58O95786 925 aaKnown RBP16.06■□□□□ 0.16
RPUSD3-203ENST00000423108 HMGB2P26583 209 aaKnown RBP16.06■□□□□ 0.16
RPUSD3-203ENST00000423108 PDE3AQ14432 1141 aa16.06■□□□□ 0.16
RPUSD3-203ENST00000423108 SLC4A10Q6U841 1118 aa16.06■□□□□ 0.16
RPUSD3-203ENST00000423108 COL23A1Q86Y22 540 aaPredicted RBP16.06■□□□□ 0.16
RPUSD3-203ENST00000423108 METTL22Q9BUU2 404 aaPredicted RBP16.06■□□□□ 0.16
RPUSD3-203ENST00000423108 STK32BQ9NY57 414 aa16.06■□□□□ 0.16
RPUSD3-203ENST00000423108 ERVV-1B6SEH8 477 aa16.05■□□□□ 0.16
RPUSD3-203ENST00000423108 ADRA2BP18089 450 aa16.05■□□□□ 0.16
RPUSD3-203ENST00000423108 SSFA2P28290 1259 aa16.05■□□□□ 0.16
RPUSD3-203ENST00000423108 BEND3Q5T5X7 828 aa16.05■□□□□ 0.16
RPUSD3-203ENST00000423108 USPL1Q5W0Q7 1092 aa16.05■□□□□ 0.16
RPUSD3-203ENST00000423108 KIF6Q6ZMV9 814 aa16.05■□□□□ 0.16
RPUSD3-203ENST00000423108 NARFQ9UHQ1 456 aa16.05■□□□□ 0.16
RPUSD3-203ENST00000423108 PNPLA7Q6ZV29 1317 aa16.04■□□□□ 0.16
RPUSD3-203ENST00000423108 IGKV5-2P06315 115 aa16.04■□□□□ 0.16
RPUSD3-203ENST00000423108 TCIRG1Q13488 830 aa16.04■□□□□ 0.16
RPUSD3-203ENST00000423108 INTS3Q68E01 1043 aaKnown RBP16.04■□□□□ 0.16
RPUSD3-203ENST00000423108 GIGYF2Q6Y7W6 1299 aaKnown RBP16.04■□□□□ 0.16
RPUSD3-203ENST00000423108 NPM2Q86SE8 214 aaKnown RBP16.04■□□□□ 0.16
RPUSD3-203ENST00000423108 CRBNQ96SW2 442 aa16.04■□□□□ 0.16
RPUSD3-203ENST00000423108 MYD88Q99836 296 aa16.04■□□□□ 0.16
RPUSD3-203ENST00000423108 COG6Q9Y2V7 657 aa16.04■□□□□ 0.16
RPUSD3-203ENST00000423108 NUP188Q5SRE5 1749 aa16.03■□□□□ 0.16
RPUSD3-203ENST00000423108 ATP5J2-PTCD1G3V325 749 aa16.03■□□□□ 0.16
RPUSD3-203ENST00000423108 RFC4P35249 363 aa16.03■□□□□ 0.16
RPUSD3-203ENST00000423108 FTSJ3Q8IY81 847 aaKnown RBP16.03■□□□□ 0.16
RPUSD3-203ENST00000423108 ISCA1Q9BUE6 129 aa16.03■□□□□ 0.16
RPUSD3-203ENST00000423108 UBR3Q6ZT12 1888 aa16.03■□□□□ 0.16
RPUSD3-203ENST00000423108 USP42Q9H9J4 1324 aaKnown RBP16.02■□□□□ 0.16
RPUSD3-203ENST00000423108 CWF19L2Q2TBE0 894 aaKnown RBP16.02■□□□□ 0.16
RPUSD3-203ENST00000423108 PDGFDQ9GZP0 370 aaPredicted RBP16.02■□□□□ 0.16
RPUSD3-203ENST00000423108 ZPR1O75312 459 aa16.01■□□□□ 0.15
RPUSD3-203ENST00000423108 MS4A1P11836 297 aa16.01■□□□□ 0.15
RPUSD3-203ENST00000423108 FKBP8Q14318 412 aa16.01■□□□□ 0.15
RPUSD3-203ENST00000423108 MVPQ14764 893 aaKnown RBP16.01■□□□□ 0.15
RPUSD3-203ENST00000423108 ZNF34Q8IZ26 560 aa16.01■□□□□ 0.15
RPUSD3-203ENST00000423108 LINS1Q8NG48 757 aa16.01■□□□□ 0.15
RPUSD3-203ENST00000423108 EXOC6Q8TAG9 804 aa16.01■□□□□ 0.15
RPUSD3-203ENST00000423108 NEURL1BA8MQ27 555 aa16■□□□□ 0.15
RPUSD3-203ENST00000423108 GYS1P13807 737 aa16■□□□□ 0.15
RPUSD3-203ENST00000423108 GPTP24298 496 aa16■□□□□ 0.15
RPUSD3-203ENST00000423108 CCT4P50991 539 aaKnown RBP16■□□□□ 0.15
RPUSD3-203ENST00000423108 TRIM28Q13263 835 aaKnown RBP16■□□□□ 0.15
RPUSD3-203ENST00000423108 CLEC4GQ6UXB4 293 aa16■□□□□ 0.15
RPUSD3-203ENST00000423108 ITPRIPQ8IWB1 547 aa16■□□□□ 0.15
RPUSD3-203ENST00000423108 SRCIN1Q9C0H9 1055 aa16■□□□□ 0.15
RPUSD3-203ENST00000423108 ATP10DQ9P241 1426 aa16■□□□□ 0.15
RPUSD3-203ENST00000423108 ZBTB7BO15156 539 aaPredicted RBP15.99■□□□□ 0.15
RPUSD3-203ENST00000423108 MSH5O43196 834 aa15.99■□□□□ 0.15
RPUSD3-203ENST00000423108 ALDH1L1O75891 902 aa15.99■□□□□ 0.15
RPUSD3-203ENST00000423108 TBC1D9BQ66K14 1250 aa15.99■□□□□ 0.15
RPUSD3-203ENST00000423108 FLAD1Q8NFF5 587 aa15.99■□□□□ 0.15
RPUSD3-203ENST00000423108 JARID2Q92833 1246 aaPredicted RBP15.99■□□□□ 0.15
RPUSD3-203ENST00000423108 USP44Q9H0E7 712 aa15.99■□□□□ 0.15
RPUSD3-203ENST00000423108 UBN2Q6ZU65 1347 aa15.98■□□□□ 0.15
RPUSD3-203ENST00000423108 RGL2O15211 777 aa15.98■□□□□ 0.15
RPUSD3-203ENST00000423108 NEXNQ0ZGT2 675 aa15.98■□□□□ 0.15
RPUSD3-203ENST00000423108 GCKRQ14397 625 aa15.98■□□□□ 0.15
RPUSD3-203ENST00000423108 BICDL1Q6ZP65 573 aa15.98■□□□□ 0.15
RPUSD3-203ENST00000423108 NLRP10Q86W26 655 aa15.98■□□□□ 0.15
RPUSD3-203ENST00000423108 TUBGCP6Q96RT7 1819 aa15.98■□□□□ 0.15
RPUSD3-203ENST00000423108 NFIXQ14938 502 aa15.97■□□□□ 0.15
RPUSD3-203ENST00000423108 HSP90AB3PQ58FF7 597 aa15.97■□□□□ 0.15
RPUSD3-203ENST00000423108 SUSD4Q5VX71 490 aa15.97■□□□□ 0.15
RPUSD3-203ENST00000423108 MEIS3Q99687 375 aa15.97■□□□□ 0.15
RPUSD3-203ENST00000423108 NIP7Q9Y221 180 aaKnown RBP eCLIP15.97■□□□□ 0.15
RPUSD3-203ENST00000423108 PXDNLA1KZ92 1463 aa15.97■□□□□ 0.15
RPUSD3-203ENST00000423108 ARFGEF2Q9Y6D5 1785 aa15.96■□□□□ 0.15
RPUSD3-203ENST00000423108 TM4SF1P30408 202 aa15.96■□□□□ 0.15
RPUSD3-203ENST00000423108 R3HDM1Q15032 1099 aaKnown RBP15.96■□□□□ 0.15
RPUSD3-203ENST00000423108 SYNE4Q8N205 404 aa15.96■□□□□ 0.15
RPUSD3-203ENST00000423108 CCDC191Q8NCU4 936 aa15.96■□□□□ 0.15
RPUSD3-203ENST00000423108 ZNF652Q9Y2D9 606 aa15.96■□□□□ 0.15
RPUSD3-203ENST00000423108 C4AP0C0L4 1744 aa15.95■□□□□ 0.14
RPUSD3-203ENST00000423108 H7C1W4 665 aa15.95■□□□□ 0.14
RPUSD3-203ENST00000423108 NBPF7P0C2Y1 421 aaPredicted RBP15.95■□□□□ 0.14
RPUSD3-203ENST00000423108 CASP7P55210 303 aa15.95■□□□□ 0.14
RPUSD3-203ENST00000423108 CWC25Q9NXE8 425 aaPredicted RBP15.95■□□□□ 0.14
RPUSD3-203ENST00000423108 NUP98P52948 1817 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms