RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 TRIM35Q9UPQ4 493 aa28.65■■■□□ 2.18
TRAF4-204ENST00000422344 ZNF652Q9Y2D9 606 aa28.65■■■□□ 2.18
TRAF4-204ENST00000422344 RRAGCQ9HB90 399 aa28.64■■■□□ 2.18
TRAF4-204ENST00000422344 LAS1LQ9Y4W2 734 aaKnown RBP28.64■■■□□ 2.18
TRAF4-204ENST00000422344 CARMIL3Q8ND23 1372 aa28.63■■■□□ 2.17
TRAF4-204ENST00000422344 BCORQ6W2J9 1755 aa28.63■■■□□ 2.17
TRAF4-204ENST00000422344 SETDB2Q96T68 719 aa28.63■■■□□ 2.17
TRAF4-204ENST00000422344 WDR90Q96KV7 1748 aa28.63■■■□□ 2.17
TRAF4-204ENST00000422344 RASSF7Q02833 373 aa28.62■■■□□ 2.17
TRAF4-204ENST00000422344 NRXN2Q9P2S2 1712 aa28.62■■■□□ 2.17
TRAF4-204ENST00000422344 APAF1O14727 1248 aa28.61■■■□□ 2.17
TRAF4-204ENST00000422344 NPHP1O15259 732 aa28.61■■■□□ 2.17
TRAF4-204ENST00000422344 HTRA3P83110 453 aa28.61■■■□□ 2.17
TRAF4-204ENST00000422344 FSTL1Q12841 308 aa28.61■■■□□ 2.17
TRAF4-204ENST00000422344 CCDC184Q52MB2 194 aa28.61■■■□□ 2.17
TRAF4-204ENST00000422344 CLEC4GQ6UXB4 293 aa28.6■■■□□ 2.17
TRAF4-204ENST00000422344 NGEFQ8N5V2 710 aa28.6■■■□□ 2.17
TRAF4-204ENST00000422344 MRS2Q9HD23 443 aa28.6■■■□□ 2.17
TRAF4-204ENST00000422344 MYL6BP14649 208 aa28.58■■■□□ 2.17
TRAF4-204ENST00000422344 ERBB4Q15303 1308 aa28.58■■■□□ 2.17
TRAF4-204ENST00000422344 TNRC6CQ9HCJ0 1690 aaKnown RBP28.58■■■□□ 2.16
TRAF4-204ENST00000422344 CHL1O00533 1208 aa28.57■■■□□ 2.16
TRAF4-204ENST00000422344 RGL2O15211 777 aa28.56■■■□□ 2.16
TRAF4-204ENST00000422344 EIF2S2P20042 333 aaKnown RBP28.56■■■□□ 2.16
TRAF4-204ENST00000422344 CALD1Q05682 793 aaKnown RBP28.56■■■□□ 2.16
TRAF4-204ENST00000422344 KIF6Q6ZMV9 814 aa28.56■■■□□ 2.16
TRAF4-204ENST00000422344 C2CD5Q86YS7 1000 aa28.56■■■□□ 2.16
TRAF4-204ENST00000422344 TTLL6Q8N841 843 aa28.56■■■□□ 2.16
TRAF4-204ENST00000422344 CNBD1Q8NA66 436 aa28.56■■■□□ 2.16
TRAF4-204ENST00000422344 DLEC1Q9Y238 1755 aa28.55■■■□□ 2.16
TRAF4-204ENST00000422344 LMNB1P20700 586 aa28.54■■■□□ 2.16
TRAF4-204ENST00000422344 ST5P78524 1137 aa28.54■■■□□ 2.16
TRAF4-204ENST00000422344 PRR5LQ6MZQ0 368 aa28.54■■■□□ 2.16
TRAF4-204ENST00000422344 KLRG1Q96E93 195 aa28.54■■■□□ 2.16
TRAF4-204ENST00000422344 ZC3H4Q9UPT8 1303 aaKnown RBP28.53■■■□□ 2.16
TRAF4-204ENST00000422344 H0YIN7 160 aa28.53■■■□□ 2.16
TRAF4-204ENST00000422344 PRELPP51888 382 aa28.53■■■□□ 2.16
TRAF4-204ENST00000422344 CFAP44Q96MT7 982 aa28.53■■■□□ 2.16
TRAF4-204ENST00000422344 NIP7Q9Y221 180 aaKnown RBP eCLIP28.53■■■□□ 2.16
TRAF4-204ENST00000422344 PDE6BP35913 854 aa28.52■■■□□ 2.16
TRAF4-204ENST00000422344 NBPF5PQ86XG9 351 aaPredicted RBP28.52■■■□□ 2.16
TRAF4-204ENST00000422344 BRIP1Q9BX63 1249 aa28.52■■■□□ 2.16
TRAF4-204ENST00000422344 CCDC88AQ3V6T2 1871 aa28.51■■■□□ 2.15
TRAF4-204ENST00000422344 CCDC24Q8N4L8 307 aa28.51■■■□□ 2.15
TRAF4-204ENST00000422344 SMC1BQ8NDV3 1235 aa28.51■■■□□ 2.15
TRAF4-204ENST00000422344 MAP3K15Q6ZN16 1313 aa28.5■■■□□ 2.15
TRAF4-204ENST00000422344 ERVV-1B6SEH8 477 aa28.5■■■□□ 2.15
TRAF4-204ENST00000422344 PDZRN3Q9UPQ7 1066 aa28.5■■■□□ 2.15
TRAF4-204ENST00000422344 GLTPD2A6NH11 291 aa28.49■■■□□ 2.15
TRAF4-204ENST00000422344 HLFQ16534 295 aa28.49■■■□□ 2.15
TRAF4-204ENST00000422344 TTLL7Q6ZT98 887 aa28.49■■■□□ 2.15
TRAF4-204ENST00000422344 NECTIN2Q92692 538 aa28.49■■■□□ 2.15
TRAF4-204ENST00000422344 GNAI1P63096 354 aa28.48■■■□□ 2.15
TRAF4-204ENST00000422344 KRT24Q2M2I5 525 aa28.48■■■□□ 2.15
TRAF4-204ENST00000422344 ZBTB3Q9H5J0 574 aa28.48■■■□□ 2.15
TRAF4-204ENST00000422344 IFT57Q9NWB7 429 aa28.48■■■□□ 2.15
TRAF4-204ENST00000422344 NFKBIEO00221 500 aa28.47■■■□□ 2.15
TRAF4-204ENST00000422344 VEGFAP15692 232 aaPredicted RBP28.47■■■□□ 2.15
TRAF4-204ENST00000422344 TPTE2Q6XPS3 522 aa28.47■■■□□ 2.15
TRAF4-204ENST00000422344 ZNF622Q969S3 477 aaKnown RBP eCLIP28.47■■■□□ 2.15
TRAF4-204ENST00000422344 MBIPQ9NS73 344 aa28.47■■■□□ 2.15
TRAF4-204ENST00000422344 FAM177BA6PVY3 158 aa28.46■■■□□ 2.15
TRAF4-204ENST00000422344 JMYQ8N9B5 988 aa28.46■■■□□ 2.15
TRAF4-204ENST00000422344 ANKRD31Q8N7Z5 1873 aa28.46■■■□□ 2.15
TRAF4-204ENST00000422344 HOXB7P09629 217 aa28.45■■■□□ 2.14
TRAF4-204ENST00000422344 PDIA6Q15084 440 aa28.45■■■□□ 2.14
TRAF4-204ENST00000422344 ZNF219Q9P2Y4 722 aaPredicted RBP28.45■■■□□ 2.14
TRAF4-204ENST00000422344 TIAM2Q8IVF5 1701 aa28.45■■■□□ 2.14
TRAF4-204ENST00000422344 ANXA1P04083 346 aa28.44■■■□□ 2.14
TRAF4-204ENST00000422344 GTF2E1P29083 439 aaPredicted RBP28.44■■■□□ 2.14
TRAF4-204ENST00000422344 HDGFL1Q5TGJ6 251 aa28.44■■■□□ 2.14
TRAF4-204ENST00000422344 PCNTO95613 3336 aa28.44■■■□□ 2.14
TRAF4-204ENST00000422344 ZNF853P0CG23 659 aa28.43■■■□□ 2.14
TRAF4-204ENST00000422344 PROSER3Q2NL68 480 aa28.43■■■□□ 2.14
TRAF4-204ENST00000422344 NYXQ9GZU5 481 aa28.42■■■□□ 2.14
TRAF4-204ENST00000422344 DDX21Q9NR30 783 aaKnown RBP eCLIP28.42■■■□□ 2.14
TRAF4-204ENST00000422344 NUP98P52948 1817 aa28.41■■■□□ 2.14
TRAF4-204ENST00000422344 C21orf2O43822 256 aa28.41■■■□□ 2.14
TRAF4-204ENST00000422344 DUSP27Q5VZP5 1158 aa28.41■■■□□ 2.14
TRAF4-204ENST00000422344 GPTP24298 496 aa28.4■■■□□ 2.14
TRAF4-204ENST00000422344 AIMP1Q12904 312 aaKnown RBP28.4■■■□□ 2.14
TRAF4-204ENST00000422344 GIGYF2Q6Y7W6 1299 aaKnown RBP28.4■■■□□ 2.14
TRAF4-204ENST00000422344 LRP10Q7Z4F1 713 aa28.4■■■□□ 2.14
TRAF4-204ENST00000422344 CHPF2Q9P2E5 772 aa28.4■■■□□ 2.14
TRAF4-204ENST00000422344 COL11A2P13942 1736 aaPredicted RBP28.39■■■□□ 2.14
TRAF4-204ENST00000422344 CCDC27Q2M243 656 aa28.39■■■□□ 2.14
TRAF4-204ENST00000422344 COPS6Q7L5N1 327 aa28.39■■■□□ 2.14
TRAF4-204ENST00000422344 XAGE3Q8WTP9 111 aa28.39■■■□□ 2.14
TRAF4-204ENST00000422344 COL13A1Q5TAT6 717 aaPredicted RBP28.38■■■□□ 2.13
TRAF4-204ENST00000422344 DPY19L2Q6NUT2 758 aa28.38■■■□□ 2.13
TRAF4-204ENST00000422344 DBF4Q9UBU7 674 aaPredicted RBP28.38■■■□□ 2.13
TRAF4-204ENST00000422344 POTECB2RU33 542 aa28.37■■■□□ 2.13
TRAF4-204ENST00000422344 STYK1Q6J9G0 422 aa28.37■■■□□ 2.13
TRAF4-204ENST00000422344 CNKSR1Q969H4 720 aa28.37■■■□□ 2.13
TRAF4-204ENST00000422344 MASTLQ96GX5 879 aa28.37■■■□□ 2.13
TRAF4-204ENST00000422344 SRGNP10124 158 aa28.36■■■□□ 2.13
TRAF4-204ENST00000422344 ERFEQ4G0M1 354 aa28.36■■■□□ 2.13
TRAF4-204ENST00000422344 WWC1Q8IX03 1113 aa28.36■■■□□ 2.13
TRAF4-204ENST00000422344 FAM9BQ8IZU0 186 aa28.36■■■□□ 2.13
TRAF4-204ENST00000422344 FER1L6Q2WGJ9 1857 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms